RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 K7EN84 100 aa11.35□□□□□ -0.59
FAM3A-220ENST00000497506 CXCL1P09341 107 aa11.35□□□□□ -0.59
FAM3A-220ENST00000497506 LINC00476Q8WZB0 136 aa11.35□□□□□ -0.59
FAM3A-220ENST00000497506 ZNF479Q96JC4 524 aa11.35□□□□□ -0.59
FAM3A-220ENST00000497506 SCRT2Q9NQ03 307 aa11.35□□□□□ -0.59
FAM3A-220ENST00000497506 BIN3Q9NQY0 253 aa11.35□□□□□ -0.59
FAM3A-220ENST00000497506 ALMS1Q8TCU4 4167 aa11.35□□□□□ -0.59
FAM3A-220ENST00000497506 TRAV26-1A0A087WT03 109 aa11.34□□□□□ -0.59
FAM3A-220ENST00000497506 TRAV4A0A0B4J268 109 aa11.34□□□□□ -0.59
FAM3A-220ENST00000497506 SFTA3P0C7M3 94 aa11.34□□□□□ -0.59
FAM3A-220ENST00000497506 RAB14P61106 215 aa11.34□□□□□ -0.59
FAM3A-220ENST00000497506 FHL2Q14192 279 aa11.34□□□□□ -0.59
FAM3A-220ENST00000497506 PEA15Q15121 130 aa11.34□□□□□ -0.59
FAM3A-220ENST00000497506 DAZAP1Q96EP5 407 aaKnown RBP11.34□□□□□ -0.59
FAM3A-220ENST00000497506 SMIM7Q9BQ49 75 aa11.34□□□□□ -0.59
FAM3A-220ENST00000497506 RS1O15537 224 aa11.33□□□□□ -0.6
FAM3A-220ENST00000497506 MED14OSP0DP75 135 aa11.33□□□□□ -0.6
FAM3A-220ENST00000497506 CLLU1Q5K131 121 aa11.33□□□□□ -0.6
FAM3A-220ENST00000497506 PIK3CD-AS1Q5SR53 167 aa11.33□□□□□ -0.6
FAM3A-220ENST00000497506 LGALS9CQ6DKI2 356 aa11.33□□□□□ -0.6
FAM3A-220ENST00000497506 C15orf53Q8NAA6 179 aa11.33□□□□□ -0.6
FAM3A-220ENST00000497506 OR4C5Q8NGB2 326 aa11.33□□□□□ -0.6
FAM3A-220ENST00000497506 VSIG2Q96IQ7 327 aa11.33□□□□□ -0.6
FAM3A-220ENST00000497506 SMDT1Q9H4I9 107 aa11.33□□□□□ -0.6
FAM3A-220ENST00000497506 DNAH1Q9P2D7 4330 aa11.33□□□□□ -0.6
FAM3A-220ENST00000497506 SACSQ9NZJ4 4579 aa11.32□□□□□ -0.6
FAM3A-220ENST00000497506 A0A0J9YY99 117 aa11.32□□□□□ -0.6
FAM3A-220ENST00000497506 ZNF727A8MUV8 499 aa11.32□□□□□ -0.6
FAM3A-220ENST00000497506 CFAP126Q5VTH2 177 aa11.32□□□□□ -0.6
FAM3A-220ENST00000497506 NUDT10Q8NFP7 164 aa11.32□□□□□ -0.6
FAM3A-220ENST00000497506 OR2D3Q8NGH3 330 aa11.32□□□□□ -0.6
FAM3A-220ENST00000497506 NUDT11Q96G61 164 aa11.32□□□□□ -0.6
FAM3A-220ENST00000497506 SSBP4Q9BWG4 385 aaPredicted RBP11.32□□□□□ -0.6
FAM3A-220ENST00000497506 LY96Q9Y6Y9 160 aa11.32□□□□□ -0.6
FAM3A-220ENST00000497506 H3BNG1 76 aa11.31□□□□□ -0.6
FAM3A-220ENST00000497506 LY6G6CO95867 125 aa11.31□□□□□ -0.6
FAM3A-220ENST00000497506 P01737 135 aa11.31□□□□□ -0.6
FAM3A-220ENST00000497506 DMRTA1Q5VZB9 504 aa11.31□□□□□ -0.6
FAM3A-220ENST00000497506 PRO0255Q9UI72 69 aa11.31□□□□□ -0.6
FAM3A-220ENST00000497506 PHLDA3Q9Y5J5 127 aa11.31□□□□□ -0.6
FAM3A-220ENST00000497506 TRGV4A0A0C4DH28 118 aa11.3□□□□□ -0.6
FAM3A-220ENST00000497506 SNAI2O43623 268 aa11.3□□□□□ -0.6
FAM3A-220ENST00000497506 NUDT3O95989 172 aa11.3□□□□□ -0.6
FAM3A-220ENST00000497506 GZMBP10144 247 aa11.3□□□□□ -0.6
FAM3A-220ENST00000497506 CRYBA4P53673 196 aa11.3□□□□□ -0.6
FAM3A-220ENST00000497506 RPS20P60866 119 aaKnown RBP11.3□□□□□ -0.6
FAM3A-220ENST00000497506 SLAQ13239 276 aa11.3□□□□□ -0.6
FAM3A-220ENST00000497506 LINC01551Q86U37 167 aa11.3□□□□□ -0.6
FAM3A-220ENST00000497506 RNASE7Q9H1E1 156 aaKnown RBP11.3□□□□□ -0.6
FAM3A-220ENST00000497506 JPT2Q9H910 190 aa11.3□□□□□ -0.6
FAM3A-220ENST00000497506 HHLA3Q9XRX5 114 aa11.3□□□□□ -0.6
FAM3A-220ENST00000497506 PAX4O43316 350 aa11.29□□□□□ -0.6
FAM3A-220ENST00000497506 OR5AL1P0C617 328 aa11.29□□□□□ -0.6
FAM3A-220ENST00000497506 IGLC6P0CF74 106 aa11.29□□□□□ -0.6
FAM3A-220ENST00000497506 FAM74A3Q4VXF1 159 aa11.29□□□□□ -0.6
FAM3A-220ENST00000497506 SYT8Q8NBV8 401 aa11.29□□□□□ -0.6
FAM3A-220ENST00000497506 OR10AG1Q8NH19 301 aa11.29□□□□□ -0.6
FAM3A-220ENST00000497506 VPS13DQ5THJ4 4388 aa11.29□□□□□ -0.6
FAM3A-220ENST00000497506 A8MWV9 139 aa11.28□□□□□ -0.6
FAM3A-220ENST00000497506 M0R381 172 aa11.28□□□□□ -0.6
FAM3A-220ENST00000497506 CIDEAO60543 219 aa11.28□□□□□ -0.6
FAM3A-220ENST00000497506 NXPH4O95158 308 aa11.28□□□□□ -0.6
FAM3A-220ENST00000497506 FAM231DQ6ZW35 169 aa11.28□□□□□ -0.6
FAM3A-220ENST00000497506 ZFP82Q8N141 532 aa11.28□□□□□ -0.6
FAM3A-220ENST00000497506 RPP21Q9H633 154 aaKnown RBP11.28□□□□□ -0.6
FAM3A-220ENST00000497506 A0A096LPF7 62 aa11.27□□□□□ -0.61
FAM3A-220ENST00000497506 IGHV3-73A0A0B4J1V6 119 aa11.27□□□□□ -0.61
FAM3A-220ENST00000497506 P0DMU3 169 aa11.27□□□□□ -0.61
FAM3A-220ENST00000497506 FAM231AP0DMU4 169 aa11.27□□□□□ -0.61
FAM3A-220ENST00000497506 FAM231CP0DMU5 169 aa11.27□□□□□ -0.61
FAM3A-220ENST00000497506 GATA1P15976 413 aaPredicted RBP11.27□□□□□ -0.61
FAM3A-220ENST00000497506 TMEM241Q24JQ0 296 aa11.27□□□□□ -0.61
FAM3A-220ENST00000497506 UFSP1Q6NVU6 142 aa11.27□□□□□ -0.61
FAM3A-220ENST00000497506 SFRP2Q96HF1 295 aa11.27□□□□□ -0.61
FAM3A-220ENST00000497506 SAMD10Q9BYL1 202 aa11.27□□□□□ -0.61
FAM3A-220ENST00000497506 MUC21A0A0G2JKD1 596 aa11.26□□□□□ -0.61
FAM3A-220ENST00000497506 MUC21A0A140T8X8 626 aa11.26□□□□□ -0.61
FAM3A-220ENST00000497506 XKRY2A2RUG3 117 aa11.26□□□□□ -0.61
FAM3A-220ENST00000497506 ZFP2Q6ZN57 461 aa11.26□□□□□ -0.61
FAM3A-220ENST00000497506 FER1L6-AS1Q8NA97 138 aa11.26□□□□□ -0.61
FAM3A-220ENST00000497506 GATCO43716 136 aaKnown RBP11.25□□□□□ -0.61
FAM3A-220ENST00000497506 CRYGDP07320 174 aa11.25□□□□□ -0.61
FAM3A-220ENST00000497506 ERVFC1-1P60608 527 aa11.25□□□□□ -0.61
FAM3A-220ENST00000497506 RPL23P62829 140 aaKnown RBP11.25□□□□□ -0.61
FAM3A-220ENST00000497506 RNF212Q495C1 297 aa11.25□□□□□ -0.61
FAM3A-220ENST00000497506 SOHLH1Q5JUK2 328 aa11.25□□□□□ -0.61
FAM3A-220ENST00000497506 Q6ZSN1 163 aa11.25□□□□□ -0.61
FAM3A-220ENST00000497506 NAT8Q9UHE5 227 aa11.25□□□□□ -0.61
FAM3A-220ENST00000497506 RYR3Q15413 4870 aa11.25□□□□□ -0.61
FAM3A-220ENST00000497506 RYR2Q92736 4967 aa11.25□□□□□ -0.61
FAM3A-220ENST00000497506 SPANXN1Q5VSR9 72 aa11.24□□□□□ -0.61
FAM3A-220ENST00000497506 SLC25A29Q8N8R3 303 aa11.24□□□□□ -0.61
FAM3A-220ENST00000497506 TPPP3Q9BW30 176 aa11.24□□□□□ -0.61
FAM3A-220ENST00000497506 OSTCQ9NRP0 149 aa11.24□□□□□ -0.61
FAM3A-220ENST00000497506 ICOSQ9Y6W8 199 aa11.24□□□□□ -0.61
FAM3A-220ENST00000497506 A0A087WWL8 130 aa11.23□□□□□ -0.61
FAM3A-220ENST00000497506 TRBV6-4A0A1B0GX49 114 aa11.23□□□□□ -0.61
FAM3A-220ENST00000497506 A0A1W2PPQ1 181 aa11.23□□□□□ -0.61
FAM3A-220ENST00000497506 F2Z2F3 143 aa11.23□□□□□ -0.61
FAM3A-220ENST00000497506 SSTP61278 116 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms