RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 PGPEP1LA6NFU8 196 aa7.44□□□□□ -1.22
SHROOM3-210ENST00000497440 KRBOX1C9JBD0 128 aa7.44□□□□□ -1.22
SHROOM3-210ENST00000497440 K7EP13 123 aa7.44□□□□□ -1.22
SHROOM3-210ENST00000497440 IFNA7P01567 189 aa7.44□□□□□ -1.22
SHROOM3-210ENST00000497440 ORM1P02763 201 aa7.44□□□□□ -1.22
SHROOM3-210ENST00000497440 PPT1P50897 306 aa7.44□□□□□ -1.22
SHROOM3-210ENST00000497440 UBE2G2P60604 165 aa7.44□□□□□ -1.22
SHROOM3-210ENST00000497440 EIF5AP63241 154 aaKnown RBP7.44□□□□□ -1.22
SHROOM3-210ENST00000497440 TNP2Q05952 138 aa7.44□□□□□ -1.22
SHROOM3-210ENST00000497440 ZNF876PQ49A33 203 aa7.44□□□□□ -1.22
SHROOM3-210ENST00000497440 TTC32Q5I0X7 151 aa7.44□□□□□ -1.22
SHROOM3-210ENST00000497440 UFSP1Q6NVU6 142 aa7.44□□□□□ -1.22
SHROOM3-210ENST00000497440 NEGR1Q7Z3B1 354 aa7.44□□□□□ -1.22
SHROOM3-210ENST00000497440 OR4C5Q8NGB2 326 aa7.44□□□□□ -1.22
SHROOM3-210ENST00000497440 ZC2HC1AQ96GY0 325 aa7.44□□□□□ -1.22
SHROOM3-210ENST00000497440 FMC1Q96HJ9 113 aa7.44□□□□□ -1.22
SHROOM3-210ENST00000497440 ZNF471Q9BX82 626 aaPredicted RBP7.44□□□□□ -1.22
SHROOM3-210ENST00000497440 NAGKQ9UJ70 344 aa7.44□□□□□ -1.22
SHROOM3-210ENST00000497440 TRGV4A0A0C4DH28 118 aa7.43□□□□□ -1.22
SHROOM3-210ENST00000497440 KANTRA0A1W2PQU2 76 aa7.43□□□□□ -1.22
SHROOM3-210ENST00000497440 SIVA1O15304 175 aa7.43□□□□□ -1.22
SHROOM3-210ENST00000497440 ZFP2Q6ZN57 461 aa7.43□□□□□ -1.22
SHROOM3-210ENST00000497440 SFT2D1Q8WV19 159 aa7.43□□□□□ -1.22
SHROOM3-210ENST00000497440 PAGE4O60829 102 aa7.42□□□□□ -1.22
SHROOM3-210ENST00000497440 C1QBP02746 253 aa7.42□□□□□ -1.22
SHROOM3-210ENST00000497440 DNAH10OSP0CZ25 163 aa7.42□□□□□ -1.22
SHROOM3-210ENST00000497440 TPT1P13693 172 aaKnown RBP7.42□□□□□ -1.22
SHROOM3-210ENST00000497440 GYPEP15421 78 aa7.42□□□□□ -1.22
SHROOM3-210ENST00000497440 RAB5CP51148 216 aa7.42□□□□□ -1.22
SHROOM3-210ENST00000497440 LINC01559Q495D7 138 aa7.42□□□□□ -1.22
SHROOM3-210ENST00000497440 ZFP69Q49AA0 526 aa7.42□□□□□ -1.22
SHROOM3-210ENST00000497440 ZNF506Q5JVG8 444 aa7.42□□□□□ -1.22
SHROOM3-210ENST00000497440 SLC25A29Q8N8R3 303 aa7.42□□□□□ -1.22
SHROOM3-210ENST00000497440 C9JCJ5 164 aa7.41□□□□□ -1.22
SHROOM3-210ENST00000497440 NXPH4O95158 308 aa7.41□□□□□ -1.22
SHROOM3-210ENST00000497440 S100A9P06702 114 aaKnown RBP7.41□□□□□ -1.22
SHROOM3-210ENST00000497440 H2AFB1P0C5Y9 115 aa7.41□□□□□ -1.22
SHROOM3-210ENST00000497440 LINC00694P0DN24 101 aa7.41□□□□□ -1.22
SHROOM3-210ENST00000497440 MED14OSP0DP75 135 aa7.41□□□□□ -1.22
SHROOM3-210ENST00000497440 SULT1A2P50226 295 aa7.41□□□□□ -1.22
SHROOM3-210ENST00000497440 CCL20P78556 96 aa7.41□□□□□ -1.22
SHROOM3-210ENST00000497440 Q6ZSN1 163 aa7.41□□□□□ -1.22
SHROOM3-210ENST00000497440 SH2D6Q7Z4S9 175 aa7.41□□□□□ -1.22
SHROOM3-210ENST00000497440 FAM213BQ8TBF2 198 aa7.41□□□□□ -1.22
SHROOM3-210ENST00000497440 C11orf52Q96A22 123 aa7.41□□□□□ -1.22
SHROOM3-210ENST00000497440 SSBP4Q9BWG4 385 aaPredicted RBP7.41□□□□□ -1.22
SHROOM3-210ENST00000497440 A8MWV9 139 aa7.4□□□□□ -1.22
SHROOM3-210ENST00000497440 SH2D1AO60880 128 aa7.4□□□□□ -1.22
SHROOM3-210ENST00000497440 CXCL1P09341 107 aa7.4□□□□□ -1.22
SHROOM3-210ENST00000497440 FAM162BQ5T6X4 162 aa7.4□□□□□ -1.22
SHROOM3-210ENST00000497440 CST9LP1Q5W188 147 aa7.4□□□□□ -1.22
SHROOM3-210ENST00000497440 TXNDC17Q9BRA2 123 aa7.4□□□□□ -1.22
SHROOM3-210ENST00000497440 PARLQ9H300 379 aa7.4□□□□□ -1.22
SHROOM3-210ENST00000497440 LOC100131303A0A0U1RQF7 123 aa7.39□□□□□ -1.23
SHROOM3-210ENST00000497440 ARMS2P0C7Q2 107 aa7.39□□□□□ -1.23
SHROOM3-210ENST00000497440 MGST1P10620 155 aaKnown RBP7.39□□□□□ -1.23
SHROOM3-210ENST00000497440 SRIP30626 198 aa7.39□□□□□ -1.23
SHROOM3-210ENST00000497440 LINC00315P59091 139 aa7.39□□□□□ -1.23
SHROOM3-210ENST00000497440 DMRTA1Q5VZB9 504 aa7.39□□□□□ -1.23
SHROOM3-210ENST00000497440 SCO2A0A1W2PP80 73 aa7.38□□□□□ -1.23
SHROOM3-210ENST00000497440 B4DEV8 164 aa7.38□□□□□ -1.23
SHROOM3-210ENST00000497440 IGLV2-8P01709 118 aa7.38□□□□□ -1.23
SHROOM3-210ENST00000497440 CRYGDP07320 174 aa7.38□□□□□ -1.23
SHROOM3-210ENST00000497440 ASIPP42127 132 aa7.38□□□□□ -1.23
SHROOM3-210ENST00000497440 UBE2G1P62253 170 aa7.38□□□□□ -1.23
SHROOM3-210ENST00000497440 RHOHQ15669 191 aa7.38□□□□□ -1.23
SHROOM3-210ENST00000497440 EIF5AL1Q6IS14 154 aaKnown RBP7.38□□□□□ -1.23
SHROOM3-210ENST00000497440 SLC51BQ86UW2 128 aa7.38□□□□□ -1.23
SHROOM3-210ENST00000497440 WFDC10BQ8IUB3 73 aa7.38□□□□□ -1.23
SHROOM3-210ENST00000497440 SFRP2Q96HF1 295 aa7.38□□□□□ -1.23
SHROOM3-210ENST00000497440 Q9UF83 564 aa7.38□□□□□ -1.23
SHROOM3-210ENST00000497440 PFDN1O60925 122 aa7.37□□□□□ -1.23
SHROOM3-210ENST00000497440 AKR1C3P42330 323 aa7.37□□□□□ -1.23
SHROOM3-210ENST00000497440 C9orf62Q8N4C0 152 aa7.37□□□□□ -1.23
SHROOM3-210ENST00000497440 SAMD10Q9BYL1 202 aa7.37□□□□□ -1.23
SHROOM3-210ENST00000497440 JPT2Q9H910 190 aa7.37□□□□□ -1.23
SHROOM3-210ENST00000497440 MANBALQ9NQG1 85 aa7.37□□□□□ -1.23
SHROOM3-210ENST00000497440 SNAI2O43623 268 aa7.36□□□□□ -1.23
SHROOM3-210ENST00000497440 LINC01556Q5JQF7 62 aa7.36□□□□□ -1.23
SHROOM3-210ENST00000497440 BAGE2Q86Y30 109 aa7.36□□□□□ -1.23
SHROOM3-210ENST00000497440 LYPD6BQ8NI32 183 aa7.36□□□□□ -1.23
SHROOM3-210ENST00000497440 PCNPQ8WW12 178 aaKnown RBP7.36□□□□□ -1.23
SHROOM3-210ENST00000497440 SMIM12Q96EX1 92 aa7.36□□□□□ -1.23
SHROOM3-210ENST00000497440 LY96Q9Y6Y9 160 aa7.36□□□□□ -1.23
SHROOM3-210ENST00000497440 TRAV9-2A0A087WT02 112 aa7.35□□□□□ -1.23
SHROOM3-210ENST00000497440 H3BVH4 76 aa7.35□□□□□ -1.23
SHROOM3-210ENST00000497440 M0R036 132 aa7.35□□□□□ -1.23
SHROOM3-210ENST00000497440 OR5AL1P0C617 328 aa7.35□□□□□ -1.23
SHROOM3-210ENST00000497440 S100A4P26447 101 aaKnown RBP7.35□□□□□ -1.23
SHROOM3-210ENST00000497440 RPL35P42766 123 aaKnown RBP7.35□□□□□ -1.23
SHROOM3-210ENST00000497440 LELP1Q5T871 98 aa7.35□□□□□ -1.23
SHROOM3-210ENST00000497440 PRADC1Q9BSG0 188 aa7.35□□□□□ -1.23
SHROOM3-210ENST00000497440 KRTAP17-1Q9BYP8 105 aa7.35□□□□□ -1.23
SHROOM3-210ENST00000497440 GTSF1LQ9H1H1 148 aa7.35□□□□□ -1.23
SHROOM3-210ENST00000497440 TNFRSF18Q9Y5U5 241 aa7.35□□□□□ -1.23
SHROOM3-210ENST00000497440 VPS13BQ7Z7G8 4022 aa7.34□□□□□ -1.23
SHROOM3-210ENST00000497440 TRBV20OR9-2A0A075B6H5 130 aa7.34□□□□□ -1.23
SHROOM3-210ENST00000497440 IGHV3-38A0A0C4DH36 116 aa7.34□□□□□ -1.23
SHROOM3-210ENST00000497440 A0A1B0GV50 99 aa7.34□□□□□ -1.23
SHROOM3-210ENST00000497440 GRIFINA4D1Z8 144 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms