RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 CFAP126Q5VTH2 177 aa12.09□□□□□ -0.47
RHBDD3-207ENST00000496342 EIF5AL1Q6IS14 154 aaKnown RBP12.09□□□□□ -0.47
RHBDD3-207ENST00000496342 COX8CQ7Z4L0 72 aa12.09□□□□□ -0.47
RHBDD3-207ENST00000496342 Q9H8V8 135 aa12.09□□□□□ -0.47
RHBDD3-207ENST00000496342 TRAV1-1A0A0B4J248 108 aa12.08□□□□□ -0.48
RHBDD3-207ENST00000496342 RS1O15537 224 aa12.08□□□□□ -0.48
RHBDD3-207ENST00000496342 S100A4P26447 101 aaKnown RBP12.08□□□□□ -0.48
RHBDD3-207ENST00000496342 RAB5CP51148 216 aa12.08□□□□□ -0.48
RHBDD3-207ENST00000496342 ZNF674Q2M3X9 581 aa12.08□□□□□ -0.48
RHBDD3-207ENST00000496342 ZNF575Q86XF7 245 aa12.08□□□□□ -0.48
RHBDD3-207ENST00000496342 JPT2Q9H910 190 aa12.08□□□□□ -0.48
RHBDD3-207ENST00000496342 MANBALQ9NQG1 85 aa12.08□□□□□ -0.48
RHBDD3-207ENST00000496342 DNAH17Q9UFH2 4485 aa12.08□□□□□ -0.48
RHBDD3-207ENST00000496342 PRSS29PA6NIE9 313 aa12.07□□□□□ -0.48
RHBDD3-207ENST00000496342 GATA1P15976 413 aaPredicted RBP12.07□□□□□ -0.48
RHBDD3-207ENST00000496342 RPL19P84098 196 aaKnown RBP12.07□□□□□ -0.48
RHBDD3-207ENST00000496342 SLAQ13239 276 aa12.07□□□□□ -0.48
RHBDD3-207ENST00000496342 UPK3BQ9BT76 320 aa12.07□□□□□ -0.48
RHBDD3-207ENST00000496342 BOLA1Q9Y3E2 137 aa12.07□□□□□ -0.48
RHBDD3-207ENST00000496342 MRPL23Q16540 153 aaKnown RBP12.06□□□□□ -0.48
RHBDD3-207ENST00000496342 C1orf134Q5TEV5 83 aa12.06□□□□□ -0.48
RHBDD3-207ENST00000496342 ALKAL2Q6UX46 152 aa12.06□□□□□ -0.48
RHBDD3-207ENST00000496342 A0A1B0GVY2 172 aa12.05□□□□□ -0.48
RHBDD3-207ENST00000496342 ARMS2P0C7Q2 107 aa12.05□□□□□ -0.48
RHBDD3-207ENST00000496342 SRIP30626 198 aa12.05□□□□□ -0.48
RHBDD3-207ENST00000496342 RPL35P42766 123 aaKnown RBP12.05□□□□□ -0.48
RHBDD3-207ENST00000496342 LINC01559Q495D7 138 aa12.05□□□□□ -0.48
RHBDD3-207ENST00000496342 PRR27Q6MZM9 219 aa12.05□□□□□ -0.48
RHBDD3-207ENST00000496342 LYPD5Q6UWN5 251 aa12.05□□□□□ -0.48
RHBDD3-207ENST00000496342 LINC00336Q6ZUF6 198 aa12.05□□□□□ -0.48
RHBDD3-207ENST00000496342 BAGE2Q86Y30 109 aa12.05□□□□□ -0.48
RHBDD3-207ENST00000496342 PCNPQ8WW12 178 aaKnown RBP12.05□□□□□ -0.48
RHBDD3-207ENST00000496342 C11orf52Q96A22 123 aa12.05□□□□□ -0.48
RHBDD3-207ENST00000496342 FAT2Q9NYQ8 4349 aa12.05□□□□□ -0.48
RHBDD3-207ENST00000496342 NXPH4O95158 308 aa12.04□□□□□ -0.48
RHBDD3-207ENST00000496342 NEGR1Q7Z3B1 354 aa12.04□□□□□ -0.48
RHBDD3-207ENST00000496342 SLC25A29Q8N8R3 303 aa12.04□□□□□ -0.48
RHBDD3-207ENST00000496342 MLST8Q9BVC4 326 aa12.04□□□□□ -0.48
RHBDD3-207ENST00000496342 SAMD10Q9BYL1 202 aa12.04□□□□□ -0.48
RHBDD3-207ENST00000496342 PARLQ9H300 379 aa12.04□□□□□ -0.48
RHBDD3-207ENST00000496342 IL36BQ9NZH7 164 aa12.04□□□□□ -0.48
RHBDD3-207ENST00000496342 S100A9P06702 114 aaKnown RBP12.03□□□□□ -0.48
RHBDD3-207ENST00000496342 DMRTA1Q5VZB9 504 aa12.03□□□□□ -0.48
RHBDD3-207ENST00000496342 Q6ZSN1 163 aa12.03□□□□□ -0.48
RHBDD3-207ENST00000496342 C6orf223Q8N319 242 aa12.03□□□□□ -0.48
RHBDD3-207ENST00000496342 PTH2Q96A98 100 aa12.03□□□□□ -0.48
RHBDD3-207ENST00000496342 RAB19A4D1S5 217 aa12.02□□□□□ -0.49
RHBDD3-207ENST00000496342 TEX46H3BTG2 121 aa12.02□□□□□ -0.49
RHBDD3-207ENST00000496342 BCL2P10415 239 aa12.02□□□□□ -0.49
RHBDD3-207ENST00000496342 MEF2BQ02080 365 aaPredicted RBP12.02□□□□□ -0.49
RHBDD3-207ENST00000496342 CENPWQ5EE01 88 aa12.02□□□□□ -0.49
RHBDD3-207ENST00000496342 DNLZQ5SXM8 178 aa12.02□□□□□ -0.49
RHBDD3-207ENST00000496342 WFDC10BQ8IUB3 73 aa12.02□□□□□ -0.49
RHBDD3-207ENST00000496342 HECTD4Q9Y4D8 3996 aa12.01□□□□□ -0.49
RHBDD3-207ENST00000496342 M0R381 172 aa12.01□□□□□ -0.49
RHBDD3-207ENST00000496342 IGLV2-8P01709 118 aa12.01□□□□□ -0.49
RHBDD3-207ENST00000496342 TNP2Q05952 138 aa12.01□□□□□ -0.49
RHBDD3-207ENST00000496342 SIVA1O15304 175 aa12□□□□□ -0.49
RHBDD3-207ENST00000496342 IFNA1P01562 189 aa12□□□□□ -0.49
RHBDD3-207ENST00000496342 SOHLH1Q5JUK2 328 aa12□□□□□ -0.49
RHBDD3-207ENST00000496342 SCRT2Q9NQ03 307 aa12□□□□□ -0.49
RHBDD3-207ENST00000496342 Q9UF83 564 aa12□□□□□ -0.49
RHBDD3-207ENST00000496342 TRBV20OR9-2A0A075B6H5 130 aa11.99□□□□□ -0.49
RHBDD3-207ENST00000496342 A0A087WWL8 130 aa11.99□□□□□ -0.49
RHBDD3-207ENST00000496342 MUC21A0A0G2JKD1 596 aa11.99□□□□□ -0.49
RHBDD3-207ENST00000496342 MUC21A0A140T8X8 626 aa11.99□□□□□ -0.49
RHBDD3-207ENST00000496342 A8MWV9 139 aa11.99□□□□□ -0.49
RHBDD3-207ENST00000496342 MGST1P10620 155 aaKnown RBP11.99□□□□□ -0.49
RHBDD3-207ENST00000496342 RHOHQ15669 191 aa11.99□□□□□ -0.49
RHBDD3-207ENST00000496342 FAM74A4Q5TZK3 123 aa11.99□□□□□ -0.49
RHBDD3-207ENST00000496342 UFSP1Q6NVU6 142 aa11.99□□□□□ -0.49
RHBDD3-207ENST00000496342 TXNDC17Q9BRA2 123 aa11.99□□□□□ -0.49
RHBDD3-207ENST00000496342 PHLDA3Q9Y5J5 127 aa11.99□□□□□ -0.49
RHBDD3-207ENST00000496342 TRBV6-4A0A1B0GX49 114 aa11.98□□□□□ -0.49
RHBDD3-207ENST00000496342 TTC32Q5I0X7 151 aa11.98□□□□□ -0.49
RHBDD3-207ENST00000496342 C14orf178Q8N769 122 aaPredicted RBP11.98□□□□□ -0.49
RHBDD3-207ENST00000496342 OR10AG1Q8NH19 301 aa11.98□□□□□ -0.49
RHBDD3-207ENST00000496342 PRADC1Q9BSG0 188 aa11.98□□□□□ -0.49
RHBDD3-207ENST00000496342 MED9Q9NWA0 146 aa11.98□□□□□ -0.49
RHBDD3-207ENST00000496342 SYT8Q8NBV8 401 aa11.97□□□□□ -0.49
RHBDD3-207ENST00000496342 VAX2Q9UIW0 290 aa11.97□□□□□ -0.49
RHBDD3-207ENST00000496342 TNFRSF18Q9Y5U5 241 aa11.97□□□□□ -0.49
RHBDD3-207ENST00000496342 GAGE12JA6NER3 117 aa11.96□□□□□ -0.49
RHBDD3-207ENST00000496342 PDE6DO43924 150 aa11.96□□□□□ -0.49
RHBDD3-207ENST00000496342 GZMBP10144 247 aa11.96□□□□□ -0.49
RHBDD3-207ENST00000496342 LINC00315P59091 139 aa11.96□□□□□ -0.49
RHBDD3-207ENST00000496342 SSTP61278 116 aa11.96□□□□□ -0.49
RHBDD3-207ENST00000496342 GAGE1Q13065 139 aa11.96□□□□□ -0.49
RHBDD3-207ENST00000496342 GAGE4Q13068 117 aa11.96□□□□□ -0.49
RHBDD3-207ENST00000496342 GAGE5Q13069 117 aa11.96□□□□□ -0.49
RHBDD3-207ENST00000496342 GAGE13Q4V321 117 aa11.96□□□□□ -0.49
RHBDD3-207ENST00000496342 PIK3CD-AS1Q5SR53 167 aa11.96□□□□□ -0.49
RHBDD3-207ENST00000496342 ZFP82Q8N141 532 aa11.96□□□□□ -0.49
RHBDD3-207ENST00000496342 SFRP2Q96HF1 295 aa11.96□□□□□ -0.49
RHBDD3-207ENST00000496342 CIDEAO60543 219 aa11.95□□□□□ -0.5
RHBDD3-207ENST00000496342 GNG4P50150 75 aa11.95□□□□□ -0.5
RHBDD3-207ENST00000496342 ZFP2Q6ZN57 461 aa11.95□□□□□ -0.5
RHBDD3-207ENST00000496342 PKD1P98161 4303 aa11.94□□□□□ -0.5
RHBDD3-207ENST00000496342 A0A1W2PPQ1 181 aa11.94□□□□□ -0.5
RHBDD3-207ENST00000496342 CRYGDP07320 174 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms