RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 C9orf85Q96MD7 179 aa6.86□□□□□ -1.31
CALD1-223ENST00000496024 MLST8Q9BVC4 326 aa6.86□□□□□ -1.31
CALD1-223ENST00000496024 HHLA3Q9XRX5 114 aa6.86□□□□□ -1.31
CALD1-223ENST00000496024 IGLV2-18A0A075B6J9 118 aa6.85□□□□□ -1.31
CALD1-223ENST00000496024 IGHV3-73A0A0B4J1V6 119 aa6.85□□□□□ -1.31
CALD1-223ENST00000496024 TRAV4A0A0B4J268 109 aa6.85□□□□□ -1.31
CALD1-223ENST00000496024 RBFOX3A6NFN3 312 aa6.85□□□□□ -1.31
CALD1-223ENST00000496024 TAGLN2P37802 199 aaKnown RBP6.85□□□□□ -1.31
CALD1-223ENST00000496024 GNG4P50150 75 aa6.85□□□□□ -1.31
CALD1-223ENST00000496024 CEBPGP53567 150 aa6.85□□□□□ -1.31
CALD1-223ENST00000496024 ZNF506Q5JVG8 444 aa6.85□□□□□ -1.31
CALD1-223ENST00000496024 VSIG2Q96IQ7 327 aa6.85□□□□□ -1.31
CALD1-223ENST00000496024 DNAH10Q8IVF4 4471 aa6.85□□□□□ -1.31
CALD1-223ENST00000496024 M0R2N4 97 aa6.84□□□□□ -1.31
CALD1-223ENST00000496024 IGLV2-8P01709 118 aa6.84□□□□□ -1.31
CALD1-223ENST00000496024 ARMS2P0C7Q2 107 aa6.84□□□□□ -1.31
CALD1-223ENST00000496024 CRYBA4P53673 196 aa6.84□□□□□ -1.31
CALD1-223ENST00000496024 LINC01559Q495D7 138 aa6.84□□□□□ -1.31
CALD1-223ENST00000496024 TOR2AQ5JU69 321 aa6.84□□□□□ -1.31
CALD1-223ENST00000496024 EIF5A2Q9GZV4 153 aaKnown RBP6.84□□□□□ -1.31
CALD1-223ENST00000496024 PRO0255Q9UI72 69 aa6.84□□□□□ -1.31
CALD1-223ENST00000496024 TRBV20OR9-2A0A075B6H5 130 aa6.83□□□□□ -1.32
CALD1-223ENST00000496024 A0A096LPF7 62 aa6.83□□□□□ -1.32
CALD1-223ENST00000496024 M0R381 172 aa6.83□□□□□ -1.32
CALD1-223ENST00000496024 RS1O15537 224 aa6.83□□□□□ -1.32
CALD1-223ENST00000496024 CCL18P55774 89 aa6.83□□□□□ -1.32
CALD1-223ENST00000496024 SSTP61278 116 aa6.83□□□□□ -1.32
CALD1-223ENST00000496024 SLAQ13239 276 aa6.83□□□□□ -1.32
CALD1-223ENST00000496024 RNF212Q495C1 297 aa6.83□□□□□ -1.32
CALD1-223ENST00000496024 CFAP126Q5VTH2 177 aa6.83□□□□□ -1.32
CALD1-223ENST00000496024 TEX261Q6UWH6 196 aa6.83□□□□□ -1.32
CALD1-223ENST00000496024 ZNF575Q86XF7 245 aa6.83□□□□□ -1.32
CALD1-223ENST00000496024 LYPD6BQ8NI32 183 aa6.83□□□□□ -1.32
CALD1-223ENST00000496024 DAZAP1Q96EP5 407 aaKnown RBP6.83□□□□□ -1.32
CALD1-223ENST00000496024 JPT2Q9H910 190 aa6.83□□□□□ -1.32
CALD1-223ENST00000496024 IL36BQ9NZH7 164 aa6.83□□□□□ -1.32
CALD1-223ENST00000496024 PHLDA3Q9Y5J5 127 aa6.83□□□□□ -1.32
CALD1-223ENST00000496024 ICOSQ9Y6W8 199 aa6.83□□□□□ -1.32
CALD1-223ENST00000496024 FRAS1Q86XX4 4008 aa6.82□□□□□ -1.32
CALD1-223ENST00000496024 MUC21A0A0G2JKD1 596 aa6.82□□□□□ -1.32
CALD1-223ENST00000496024 LOC100131303A0A0U1RQF7 123 aa6.82□□□□□ -1.32
CALD1-223ENST00000496024 MUC21A0A140T8X8 626 aa6.82□□□□□ -1.32
CALD1-223ENST00000496024 H3BNG1 76 aa6.82□□□□□ -1.32
CALD1-223ENST00000496024 GYPEP15421 78 aa6.82□□□□□ -1.32
CALD1-223ENST00000496024 ESRGQ1W209 222 aa6.82□□□□□ -1.32
CALD1-223ENST00000496024 DNLZQ5SXM8 178 aa6.82□□□□□ -1.32
CALD1-223ENST00000496024 SYT8Q8NBV8 401 aa6.82□□□□□ -1.32
CALD1-223ENST00000496024 PARLQ9H300 379 aa6.82□□□□□ -1.32
CALD1-223ENST00000496024 LINC00588Q9Y4M8 146 aa6.82□□□□□ -1.32
CALD1-223ENST00000496024 TMEM250H0YL14 139 aa6.81□□□□□ -1.32
CALD1-223ENST00000496024 GZMBP10144 247 aa6.81□□□□□ -1.32
CALD1-223ENST00000496024 OR2D3Q8NGH3 330 aa6.81□□□□□ -1.32
CALD1-223ENST00000496024 PTH2Q96A98 100 aa6.81□□□□□ -1.32
CALD1-223ENST00000496024 FAM210AQ96ND0 272 aa6.81□□□□□ -1.32
CALD1-223ENST00000496024 TPPP3Q9BW30 176 aa6.81□□□□□ -1.32
CALD1-223ENST00000496024 SAMD10Q9BYL1 202 aa6.81□□□□□ -1.32
CALD1-223ENST00000496024 A0A087WWL8 130 aa6.8□□□□□ -1.32
CALD1-223ENST00000496024 C19orf71A6NCJ1 209 aa6.8□□□□□ -1.32
CALD1-223ENST00000496024 A8MWV9 139 aa6.8□□□□□ -1.32
CALD1-223ENST00000496024 P01737 135 aa6.8□□□□□ -1.32
CALD1-223ENST00000496024 GATA1P15976 413 aaPredicted RBP6.8□□□□□ -1.32
CALD1-223ENST00000496024 MRPL23Q16540 153 aaKnown RBP6.8□□□□□ -1.32
CALD1-223ENST00000496024 FAM74A4Q5TZK3 123 aa6.8□□□□□ -1.32
CALD1-223ENST00000496024 OCC1Q8TAD7 63 aa6.8□□□□□ -1.32
CALD1-223ENST00000496024 SCRT2Q9NQ03 307 aa6.8□□□□□ -1.32
CALD1-223ENST00000496024 K7EN84 100 aa6.79□□□□□ -1.32
CALD1-223ENST00000496024 K7EQD1 137 aa6.79□□□□□ -1.32
CALD1-223ENST00000496024 SRP19P09132 144 aaKnown RBP6.79□□□□□ -1.32
CALD1-223ENST00000496024 SRIP30626 198 aa6.79□□□□□ -1.32
CALD1-223ENST00000496024 Q6ZSN1 163 aa6.79□□□□□ -1.32
CALD1-223ENST00000496024 NEGR1Q7Z3B1 354 aa6.79□□□□□ -1.32
CALD1-223ENST00000496024 ZFP82Q8N141 532 aa6.79□□□□□ -1.32
CALD1-223ENST00000496024 SLC25A29Q8N8R3 303 aa6.79□□□□□ -1.32
CALD1-223ENST00000496024 OR10AG1Q8NH19 301 aa6.79□□□□□ -1.32
CALD1-223ENST00000496024 ZNRF2Q8NHG8 242 aa6.79□□□□□ -1.32
CALD1-223ENST00000496024 SMIM12Q96EX1 92 aa6.79□□□□□ -1.32
CALD1-223ENST00000496024 SMIM7Q9BQ49 75 aa6.79□□□□□ -1.32
CALD1-223ENST00000496024 RNASE7Q9H1E1 156 aaKnown RBP6.79□□□□□ -1.32
CALD1-223ENST00000496024 BIN3Q9NQY0 253 aa6.79□□□□□ -1.32
CALD1-223ENST00000496024 DNAH17Q9UFH2 4485 aa6.78□□□□□ -1.32
CALD1-223ENST00000496024 CXCL1P09341 107 aa6.78□□□□□ -1.32
CALD1-223ENST00000496024 MED14OSP0DP75 135 aa6.78□□□□□ -1.32
CALD1-223ENST00000496024 FAM3BP58499 235 aaPredicted RBP6.78□□□□□ -1.32
CALD1-223ENST00000496024 RPS20P60866 119 aaKnown RBP6.78□□□□□ -1.32
CALD1-223ENST00000496024 PIK3CD-AS1Q5SR53 167 aa6.78□□□□□ -1.32
CALD1-223ENST00000496024 SPANXN1Q5VSR9 72 aa6.78□□□□□ -1.32
CALD1-223ENST00000496024 LYPD5Q6UWN5 251 aa6.78□□□□□ -1.32
CALD1-223ENST00000496024 NUDT10Q8NFP7 164 aa6.78□□□□□ -1.32
CALD1-223ENST00000496024 NUDT11Q96G61 164 aa6.78□□□□□ -1.32
CALD1-223ENST00000496024 PRADC1Q9BSG0 188 aa6.78□□□□□ -1.32
CALD1-223ENST00000496024 DNAH2Q9P225 4427 aa6.78□□□□□ -1.32
CALD1-223ENST00000496024 TRBV6-4A0A1B0GX49 114 aa6.77□□□□□ -1.33
CALD1-223ENST00000496024 XKRY2A2RUG3 117 aa6.77□□□□□ -1.33
CALD1-223ENST00000496024 ZNF727A8MUV8 499 aa6.77□□□□□ -1.33
CALD1-223ENST00000496024 SNAI2O43623 268 aa6.77□□□□□ -1.33
CALD1-223ENST00000496024 CIDEAO60543 219 aa6.77□□□□□ -1.33
CALD1-223ENST00000496024 NXPH4O95158 308 aa6.77□□□□□ -1.33
CALD1-223ENST00000496024 SRSF3P84103 164 aaKnown RBP6.77□□□□□ -1.33
CALD1-223ENST00000496024 RHOHQ15669 191 aa6.77□□□□□ -1.33
CALD1-223ENST00000496024 ZFP2Q6ZN57 461 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms