RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 ARPC5O15511 151 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 RGS5O15539 181 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 METTL15P1P0C7V9 234 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 SULT1A3P0DMM9 295 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 SULT1A4P0DMN0 295 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 IL7P13232 177 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 AZU1P20160 251 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 UBE2G2P60604 165 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 Q1RN00 199 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 Q5BKY6 102 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 TTC32Q5I0X7 151 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 SAMD13Q5VXD3 122 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 CBLN2Q8IUK8 224 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 LGI3Q8N145 548 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 C9orf62Q8N4C0 152 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 RNF182Q8N6D2 247 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 OR4B1Q8NGF8 309 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 TRGV9Q99603 122 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 KIR2DL4Q99706 377 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 PAXXQ9BUH6 204 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.85□□□□□ -1.95
VPS52-222ENST00000495981 SCP2D1Q9UJQ7 156 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 TRAV12-2A0A075B6T6 113 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 A0A0B4J2A0 478 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 ANKRD20A5PA0PJZ0 165 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 AGPAT2O15120 278 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 C1QBP02746 253 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 ATP5G1P05496 136 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 DEFB130BP0DP73 79 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 DEFB130AP0DP74 79 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 SCGB1A1P11684 91 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 PMCHP20382 165 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 DDTP30046 118 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 S100A11P31949 105 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 ATP5G3P48201 142 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 CCR6P51684 374 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 LINC00315P59091 139 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 KRTAP10-1P60331 282 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 RPS20P60866 119 aaKnown RBP2.84□□□□□ -1.95
VPS52-222ENST00000495981 SELENOTP62341 195 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 MRPS10P82664 201 aaKnown RBP2.84□□□□□ -1.95
VPS52-222ENST00000495981 SSBP1Q04837 148 aaKnown RBP2.84□□□□□ -1.95
VPS52-222ENST00000495981 OR2F1Q13607 317 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 FCN2Q15485 313 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 EBLN2Q6P2I7 272 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 SSX7Q7RTT5 188 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 LYZL2Q7Z4W2 148 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 OR8I2Q8N0Y5 310 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 TMEM252Q8N6L7 170 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 RAB2BQ8WUD1 216 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 TMEM263Q8WUH6 116 aaKnown RBP2.84□□□□□ -1.95
VPS52-222ENST00000495981 FRZBQ92765 325 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 RPUSD4Q96CM3 377 aaKnown RBP2.84□□□□□ -1.95
VPS52-222ENST00000495981 SLC35E1Q96K37 410 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 C7orf50Q9BRJ6 194 aaKnown RBP2.84□□□□□ -1.95
VPS52-222ENST00000495981 SHANK2-AS3Q9BTD1 123 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 TMEM208Q9BTX3 173 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 SLC25A39Q9BZJ4 359 aaPredicted RBP2.84□□□□□ -1.95
VPS52-222ENST00000495981 GFRA4Q9GZZ7 299 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 RPRMQ9NS64 109 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 SHPKQ9UHJ6 478 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 C14orf166Q9Y224 244 aaKnown RBP2.84□□□□□ -1.95
VPS52-222ENST00000495981 MRPS16Q9Y3D3 137 aaKnown RBP2.84□□□□□ -1.95
VPS52-222ENST00000495981 U3KQ87 197 aa2.84□□□□□ -1.95
VPS52-222ENST00000495981 F5H768 121 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 H3BP45 60 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 K7EPK0 472 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 SLC17A3O00476 420 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 UPK1BO75841 260 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 AKAIN1P0CW23 69 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 DNAH10OSP0CZ25 163 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 IAPPP10997 89 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 CXCL3P19876 107 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 GATA2P23769 480 aaPredicted RBP2.83□□□□□ -1.96
VPS52-222ENST00000495981 GALR1P47211 349 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 PKIAP61925 76 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 IFITM3Q01628 133 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 GFI1BQ5VTD9 330 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 TEX261Q6UWH6 196 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 COMMD7Q86VX2 200 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 TMEM256Q8N2U0 113 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 ZNF738Q8NE65 137 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 OR8A1Q8NGG7 326 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 C7orf33Q8WU49 177 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 DEDD2Q8WXF8 326 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 ISOC2Q96AB3 205 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 SMIM12Q96EX1 92 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 C16orf74Q96GX8 76 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 KRTAP9-8Q9BYQ0 159 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 SLC25A22Q9H936 323 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 CACFD1Q9UGQ2 172 aa2.83□□□□□ -1.96
VPS52-222ENST00000495981 A0A1B0GV72 72 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 DUXBA0A1W2PPF3 345 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 SNRPGP15A8MWD9 76 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 DISC1C4P0D8 188 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 TSTD3H0UI37 97 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 SMKR1H3BMG3 65 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 H3BNG1 76 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 SERF1AO75920 110 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 IFNA7P01567 189 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms