RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 RNF223E7ERA6 249 aa9.83□□□□□ -0.84
PTPN7-217ENST00000495688 PF4V1P10720 104 aa9.83□□□□□ -0.84
PTPN7-217ENST00000495688 MXRA5Q9NR99 2828 aa9.82□□□□□ -0.84
PTPN7-217ENST00000495688 NDUFA4O00483 81 aa9.82□□□□□ -0.84
PTPN7-217ENST00000495688 ASIPP42127 132 aa9.82□□□□□ -0.84
PTPN7-217ENST00000495688 LENEPQ9Y5L5 61 aa9.82□□□□□ -0.84
PTPN7-217ENST00000495688 POLQO75417 2590 aa9.82□□□□□ -0.84
PTPN7-217ENST00000495688 F8VRH5 84 aa9.82□□□□□ -0.84
PTPN7-217ENST00000495688 G3V4G9 280 aa9.82□□□□□ -0.84
PTPN7-217ENST00000495688 H3BUX3 64 aa9.82□□□□□ -0.84
PTPN7-217ENST00000495688 PSMG4Q5JS54 123 aa9.82□□□□□ -0.84
PTPN7-217ENST00000495688 OR5A1Q8NGJ0 315 aa9.82□□□□□ -0.84
PTPN7-217ENST00000495688 CSTL1Q9H114 145 aa9.82□□□□□ -0.84
PTPN7-217ENST00000495688 MYO18BQ8IUG5 2567 aa9.82□□□□□ -0.84
PTPN7-217ENST00000495688 H7C1H1 209 aa9.81□□□□□ -0.84
PTPN7-217ENST00000495688 RNASE3P12724 160 aaKnown RBP9.81□□□□□ -0.84
PTPN7-217ENST00000495688 PLNP26678 52 aa9.81□□□□□ -0.84
PTPN7-217ENST00000495688 CFAP161Q6P656 301 aa9.81□□□□□ -0.84
PTPN7-217ENST00000495688 DPH3P1Q9H4G8 78 aa9.81□□□□□ -0.84
PTPN7-217ENST00000495688 CHTOPQ9Y3Y2 248 aaKnown RBP9.81□□□□□ -0.84
PTPN7-217ENST00000495688 TOMM6Q96B49 74 aa9.81□□□□□ -0.84
PTPN7-217ENST00000495688 RHPN1-AS1Q9BWJ2 59 aa9.81□□□□□ -0.84
PTPN7-217ENST00000495688 JPT2Q9H910 190 aa9.81□□□□□ -0.84
PTPN7-217ENST00000495688 OVOL1O14753 267 aa9.8□□□□□ -0.84
PTPN7-217ENST00000495688 GNLYP22749 145 aa9.8□□□□□ -0.84
PTPN7-217ENST00000495688 CRIP2P52943 208 aaPredicted RBP9.8□□□□□ -0.84
PTPN7-217ENST00000495688 C2orf66Q6UXQ4 117 aa9.8□□□□□ -0.84
PTPN7-217ENST00000495688 NEXN-AS1Q8NBZ9 246 aa9.8□□□□□ -0.84
PTPN7-217ENST00000495688 HIST1H4GQ99525 98 aa9.8□□□□□ -0.84
PTPN7-217ENST00000495688 ORMDL2Q53FV1 153 aa9.8□□□□□ -0.84
PTPN7-217ENST00000495688 HLA-DRB4P13762 266 aa9.79□□□□□ -0.84
PTPN7-217ENST00000495688 RPL24P83731 157 aaKnown RBP9.79□□□□□ -0.84
PTPN7-217ENST00000495688 BAALCQ8WXS3 180 aa9.79□□□□□ -0.84
PTPN7-217ENST00000495688 FAM19A4Q96LR4 140 aa9.79□□□□□ -0.84
PTPN7-217ENST00000495688 HLA-DRB4X5D2U9 266 aa9.79□□□□□ -0.84
PTPN7-217ENST00000495688 TRAV12-1A0A0B4J245 112 aa9.79□□□□□ -0.84
PTPN7-217ENST00000495688 IGLL5B9A064 214 aa9.79□□□□□ -0.84
PTPN7-217ENST00000495688 C12orf74Q32Q52 190 aa9.79□□□□□ -0.84
PTPN7-217ENST00000495688 ATP6V0BQ99437 205 aa9.79□□□□□ -0.84
PTPN7-217ENST00000495688 TEX48A0A1B0GUV7 120 aa9.79□□□□□ -0.84
PTPN7-217ENST00000495688 IGHG2P01859 326 aa9.79□□□□□ -0.84
PTPN7-217ENST00000495688 EMP1P54849 157 aa9.79□□□□□ -0.84
PTPN7-217ENST00000495688 TMEM95Q3KNT9 176 aa9.79□□□□□ -0.84
PTPN7-217ENST00000495688 AMTNQ6UX39 209 aa9.79□□□□□ -0.84
PTPN7-217ENST00000495688 MTURNQ8N3F0 131 aa9.79□□□□□ -0.84
PTPN7-217ENST00000495688 C20orf78Q9BR46 151 aa9.79□□□□□ -0.84
PTPN7-217ENST00000495688 PRSS29PA6NIE9 313 aa9.78□□□□□ -0.84
PTPN7-217ENST00000495688 OR11H12B2RN74 326 aa9.78□□□□□ -0.84
PTPN7-217ENST00000495688 OR11H1Q8NG94 326 aa9.78□□□□□ -0.84
PTPN7-217ENST00000495688 OR11H2Q8NH07 326 aa9.78□□□□□ -0.84
PTPN7-217ENST00000495688 CYSLTR1Q9Y271 337 aa9.78□□□□□ -0.84
PTPN7-217ENST00000495688 IGSF10Q6WRI0 2623 aa9.78□□□□□ -0.84
PTPN7-217ENST00000495688 E9PLD3 99 aa9.78□□□□□ -0.84
PTPN7-217ENST00000495688 DUSP14O95147 198 aaKnown RBP9.78□□□□□ -0.84
PTPN7-217ENST00000495688 ZNF479Q96JC4 524 aa9.78□□□□□ -0.84
PTPN7-217ENST00000495688 TRBV7-3A0A075B6L6 115 aa9.77□□□□□ -0.85
PTPN7-217ENST00000495688 MYMXA0A1B0GTQ4 84 aa9.77□□□□□ -0.85
PTPN7-217ENST00000495688 H3BMG7 143 aa9.77□□□□□ -0.85
PTPN7-217ENST00000495688 A0A087WWL8 130 aa9.77□□□□□ -0.85
PTPN7-217ENST00000495688 A6NJY4 79 aa9.77□□□□□ -0.85
PTPN7-217ENST00000495688 LINC00315P59091 139 aa9.77□□□□□ -0.85
PTPN7-217ENST00000495688 PRADC1Q9BSG0 188 aa9.77□□□□□ -0.85
PTPN7-217ENST00000495688 A6NDX4 124 aa9.76□□□□□ -0.85
PTPN7-217ENST00000495688 LGALS1P09382 135 aaKnown RBP9.76□□□□□ -0.85
PTPN7-217ENST00000495688 WFDC2Q14508 124 aa9.76□□□□□ -0.85
PTPN7-217ENST00000495688 USMG5Q96IX5 58 aa9.76□□□□□ -0.85
PTPN7-217ENST00000495688 DOPEY1Q5JWR5 2465 aa9.76□□□□□ -0.85
PTPN7-217ENST00000495688 CACNA1AO00555 2505 aa9.76□□□□□ -0.85
PTPN7-217ENST00000495688 IGHV4-30-2A0A087WSY4 118 aa9.76□□□□□ -0.85
PTPN7-217ENST00000495688 CRYGDP07320 174 aa9.76□□□□□ -0.85
PTPN7-217ENST00000495688 APRG1Q8IVJ8 170 aa9.76□□□□□ -0.85
PTPN7-217ENST00000495688 KLHL30-AS1Q8NEE0 82 aa9.76□□□□□ -0.85
PTPN7-217ENST00000495688 DAZ1Q9NQZ3 744 aaKnown RBP9.76□□□□□ -0.85
PTPN7-217ENST00000495688 KIF25-AS1Q9Y6Z4 181 aa9.76□□□□□ -0.85
PTPN7-217ENST00000495688 PIEZO1Q92508 2521 aa9.75□□□□□ -0.85
PTPN7-217ENST00000495688 TRAV12-3A0A0B4J271 114 aa9.75□□□□□ -0.85
PTPN7-217ENST00000495688 AVPP01185 164 aa9.75□□□□□ -0.85
PTPN7-217ENST00000495688 TSHBP01222 138 aa9.75□□□□□ -0.85
PTPN7-217ENST00000495688 SLC25A16P16260 332 aa9.75□□□□□ -0.85
PTPN7-217ENST00000495688 RPL39P62891 51 aaKnown RBP9.75□□□□□ -0.85
PTPN7-217ENST00000495688 C10orf99Q6UWK7 81 aa9.75□□□□□ -0.85
PTPN7-217ENST00000495688 FOXI2Q6ZQN5 318 aa9.75□□□□□ -0.85
PTPN7-217ENST00000495688 PIMREGQ9BSJ6 248 aa9.75□□□□□ -0.85
PTPN7-217ENST00000495688 IGKV3-20P01619 116 aa9.75□□□□□ -0.85
PTPN7-217ENST00000495688 CD300EQ496F6 205 aaPredicted RBP9.75□□□□□ -0.85
PTPN7-217ENST00000495688 PLEKHB2Q96CS7 222 aa9.75□□□□□ -0.85
PTPN7-217ENST00000495688 TAL2Q16559 108 aa9.74□□□□□ -0.85
PTPN7-217ENST00000495688 C10orf105Q8TEF2 133 aa9.74□□□□□ -0.85
PTPN7-217ENST00000495688 FBN2P35556 2912 aa9.74□□□□□ -0.85
PTPN7-217ENST00000495688 IGLV1-40P01703 118 aa9.74□□□□□ -0.85
PTPN7-217ENST00000495688 CD7P09564 240 aa9.74□□□□□ -0.85
PTPN7-217ENST00000495688 FAM159AQ6UWV7 190 aa9.74□□□□□ -0.85
PTPN7-217ENST00000495688 TP53TG1Q9Y2A0 90 aa9.74□□□□□ -0.85
PTPN7-217ENST00000495688 ZNF815PA8K554 130 aa9.73□□□□□ -0.85
PTPN7-217ENST00000495688 KLLNB2CW77 178 aa9.73□□□□□ -0.85
PTPN7-217ENST00000495688 F5H697 171 aa9.73□□□□□ -0.85
PTPN7-217ENST00000495688 SUMO4Q6EEV6 95 aa9.73□□□□□ -0.85
PTPN7-217ENST00000495688 SH2D6Q7Z4S9 175 aa9.73□□□□□ -0.85
PTPN7-217ENST00000495688 CCL19Q99731 98 aa9.73□□□□□ -0.85
PTPN7-217ENST00000495688 TRAV12-2A0A075B6T6 113 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms