RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 IGKV2D-24A0A075B6R9 120 aa6.39□□□□□ -1.39
UBR4-216ENST00000494503 PGPEP1LA6NFU8 196 aa6.39□□□□□ -1.39
UBR4-216ENST00000494503 INMT-MINDY4F8WBC2 141 aa6.39□□□□□ -1.39
UBR4-216ENST00000494503 CIDEAO60543 219 aa6.39□□□□□ -1.39
UBR4-216ENST00000494503 MPC2O95563 127 aa6.39□□□□□ -1.39
UBR4-216ENST00000494503 CDC34P49427 236 aaPredicted RBP6.39□□□□□ -1.39
UBR4-216ENST00000494503 ZNF80P51504 273 aaPredicted RBP6.39□□□□□ -1.39
UBR4-216ENST00000494503 H2BFSP57053 126 aa6.39□□□□□ -1.39
UBR4-216ENST00000494503 SMUG1Q53HV7 270 aa6.39□□□□□ -1.39
UBR4-216ENST00000494503 KCNIP4Q6PIL6 250 aa6.39□□□□□ -1.39
UBR4-216ENST00000494503 DAZ4Q86SG3 579 aaKnown RBP6.39□□□□□ -1.39
UBR4-216ENST00000494503 DEFB104AQ8WTQ1 72 aa6.39□□□□□ -1.39
UBR4-216ENST00000494503 S100ZQ8WXG8 99 aa6.39□□□□□ -1.39
UBR4-216ENST00000494503 DAZ3Q9NR90 486 aaKnown RBP6.39□□□□□ -1.39
UBR4-216ENST00000494503 PSG8Q9UQ74 426 aa6.39□□□□□ -1.39
UBR4-216ENST00000494503 SERTM2A0A1B0GWG4 89 aa6.38□□□□□ -1.39
UBR4-216ENST00000494503 C1QBP02746 253 aa6.38□□□□□ -1.39
UBR4-216ENST00000494503 TCRAP04437 139 aa6.38□□□□□ -1.39
UBR4-216ENST00000494503 FAM74A4Q5TZK3 123 aa6.38□□□□□ -1.39
UBR4-216ENST00000494503 C5orf17Q8NAS9 161 aa6.38□□□□□ -1.39
UBR4-216ENST00000494503 HSD17B11Q8NBQ5 300 aa6.38□□□□□ -1.39
UBR4-216ENST00000494503 SYT8Q8NBV8 401 aa6.38□□□□□ -1.39
UBR4-216ENST00000494503 RMI2Q96E14 147 aa6.38□□□□□ -1.39
UBR4-216ENST00000494503 NDUFA13Q9P0J0 144 aa6.38□□□□□ -1.39
UBR4-216ENST00000494503 C11orf21Q9P2W6 132 aa6.38□□□□□ -1.39
UBR4-216ENST00000494503 A8MWV9 139 aa6.37□□□□□ -1.39
UBR4-216ENST00000494503 ASIPP42127 132 aa6.37□□□□□ -1.39
UBR4-216ENST00000494503 SUMO1P63165 101 aaKnown RBP6.37□□□□□ -1.39
UBR4-216ENST00000494503 FLI1Q01543 452 aaPredicted RBP6.37□□□□□ -1.39
UBR4-216ENST00000494503 SCXQ7RTU7 201 aa6.37□□□□□ -1.39
UBR4-216ENST00000494503 C9orf85Q96MD7 179 aa6.37□□□□□ -1.39
UBR4-216ENST00000494503 PARLQ9H300 379 aa6.37□□□□□ -1.39
UBR4-216ENST00000494503 WFDC1Q9HC57 220 aa6.37□□□□□ -1.39
UBR4-216ENST00000494503 COX11Q9Y6N1 276 aa6.37□□□□□ -1.39
UBR4-216ENST00000494503 A0A087WWC5 75 aa6.36□□□□□ -1.39
UBR4-216ENST00000494503 A0A087WX48 190 aa6.36□□□□□ -1.39
UBR4-216ENST00000494503 H3BVH4 76 aa6.36□□□□□ -1.39
UBR4-216ENST00000494503 UPK1BO75841 260 aa6.36□□□□□ -1.39
UBR4-216ENST00000494503 IFNA7P01567 189 aa6.36□□□□□ -1.39
UBR4-216ENST00000494503 RNASE3P12724 160 aaKnown RBP6.36□□□□□ -1.39
UBR4-216ENST00000494503 GCHFRP30047 84 aa6.36□□□□□ -1.39
UBR4-216ENST00000494503 ARL6IP6Q8N6S5 226 aa6.36□□□□□ -1.39
UBR4-216ENST00000494503 CYB561D1Q8N8Q1 229 aa6.36□□□□□ -1.39
UBR4-216ENST00000494503 UBE2WQ96B02 151 aa6.36□□□□□ -1.39
UBR4-216ENST00000494503 SAMD10Q9BYL1 202 aa6.36□□□□□ -1.39
UBR4-216ENST00000494503 JPT2Q9H910 190 aa6.36□□□□□ -1.39
UBR4-216ENST00000494503 KLK12Q9UKR0 248 aa6.36□□□□□ -1.39
UBR4-216ENST00000494503 TRAV34A0A0B4J273 112 aa6.35□□□□□ -1.39
UBR4-216ENST00000494503 KRTAP29-1A8MX34 341 aaPredicted RBP6.35□□□□□ -1.39
UBR4-216ENST00000494503 M0R036 132 aa6.35□□□□□ -1.39
UBR4-216ENST00000494503 IGLV2-8P01709 118 aa6.35□□□□□ -1.39
UBR4-216ENST00000494503 SEC11BP0C7V7 166 aa6.35□□□□□ -1.39
UBR4-216ENST00000494503 FGF8P55075 233 aaPredicted RBP6.35□□□□□ -1.39
UBR4-216ENST00000494503 SAPCD1Q5SSQ6 148 aa6.35□□□□□ -1.39
UBR4-216ENST00000494503 C14orf178Q8N769 122 aaPredicted RBP6.35□□□□□ -1.39
UBR4-216ENST00000494503 Q8N976 141 aa6.35□□□□□ -1.39
UBR4-216ENST00000494503 OR2G3Q8NGZ4 309 aa6.35□□□□□ -1.39
UBR4-216ENST00000494503 RAB24Q969Q5 203 aa6.35□□□□□ -1.39
UBR4-216ENST00000494503 EPDR1Q9UM22 224 aa6.35□□□□□ -1.39
UBR4-216ENST00000494503 A0A087WWL8 130 aa6.34□□□□□ -1.39
UBR4-216ENST00000494503 B4DEV8 164 aa6.34□□□□□ -1.39
UBR4-216ENST00000494503 TMEM262E9PQX1 116 aa6.34□□□□□ -1.39
UBR4-216ENST00000494503 CXorf1O96002 111 aa6.34□□□□□ -1.39
UBR4-216ENST00000494503 STAG3L2P0CL84 134 aa6.34□□□□□ -1.39
UBR4-216ENST00000494503 STAG3L3P0CL85 134 aa6.34□□□□□ -1.39
UBR4-216ENST00000494503 DEFA1P59665 94 aa6.34□□□□□ -1.39
UBR4-216ENST00000494503 DEFA3P59666 94 aa6.34□□□□□ -1.39
UBR4-216ENST00000494503 UBE2G2P60604 165 aa6.34□□□□□ -1.39
UBR4-216ENST00000494503 DMRTA1Q5VZB9 504 aa6.34□□□□□ -1.39
UBR4-216ENST00000494503 ZFP2Q6ZN57 461 aa6.34□□□□□ -1.39
UBR4-216ENST00000494503 Q6ZSA8 131 aa6.34□□□□□ -1.39
UBR4-216ENST00000494503 OR11H4Q8NGC9 324 aa6.34□□□□□ -1.39
UBR4-216ENST00000494503 DNAJC30Q96LL9 226 aa6.34□□□□□ -1.39
UBR4-216ENST00000494503 TMEM167BQ9NRX6 74 aa6.34□□□□□ -1.39
UBR4-216ENST00000494503 Q9UF83 564 aa6.34□□□□□ -1.39
UBR4-216ENST00000494503 TMSB15BA0A087X1C1 80 aa6.33□□□□□ -1.4
UBR4-216ENST00000494503 GRIFINA4D1Z8 144 aa6.33□□□□□ -1.4
UBR4-216ENST00000494503 FABP5P3A8MUU1 101 aa6.33□□□□□ -1.4
UBR4-216ENST00000494503 M0R381 172 aa6.33□□□□□ -1.4
UBR4-216ENST00000494503 RHODO00212 210 aa6.33□□□□□ -1.4
UBR4-216ENST00000494503 IGLV2-11P01706 119 aa6.33□□□□□ -1.4
UBR4-216ENST00000494503 MBP02144 154 aa6.33□□□□□ -1.4
UBR4-216ENST00000494503 CRPP02741 224 aa6.33□□□□□ -1.4
UBR4-216ENST00000494503 SERTAD4-AS1Q5TG53 156 aa6.33□□□□□ -1.4
UBR4-216ENST00000494503 NIT1Q86X76 327 aa6.33□□□□□ -1.4
UBR4-216ENST00000494503 LINC00479Q96M42 142 aa6.33□□□□□ -1.4
UBR4-216ENST00000494503 CHAC1Q9BUX1 264 aa6.33□□□□□ -1.4
UBR4-216ENST00000494503 ACTR3CQ9C0K3 210 aaPredicted RBP6.33□□□□□ -1.4
UBR4-216ENST00000494503 PHLDA3Q9Y5J5 127 aa6.33□□□□□ -1.4
UBR4-216ENST00000494503 ARL2-SNX15V9GYD0 113 aa6.33□□□□□ -1.4
UBR4-216ENST00000494503 IGKV3D-20A0A0C4DH25 116 aa6.32□□□□□ -1.4
UBR4-216ENST00000494503 HLA-DQA1P01909 254 aa6.32□□□□□ -1.4
UBR4-216ENST00000494503 TPT1P13693 172 aaKnown RBP6.32□□□□□ -1.4
UBR4-216ENST00000494503 ATP6V0CP27449 155 aa6.32□□□□□ -1.4
UBR4-216ENST00000494503 ELOBQ15370 118 aa6.32□□□□□ -1.4
UBR4-216ENST00000494503 CIRBP-AS1Q8TBR5 109 aa6.32□□□□□ -1.4
UBR4-216ENST00000494503 PTH2Q96A98 100 aa6.32□□□□□ -1.4
UBR4-216ENST00000494503 MARVELD1Q9BSK0 173 aa6.32□□□□□ -1.4
UBR4-216ENST00000494503 C1orf43Q9BWL3 253 aa6.32□□□□□ -1.4
UBR4-216ENST00000494503 PLA2G2DQ9UNK4 145 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms