RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 HLA-DRB4P13762 266 aa12.23□□□□□ -0.45
ATG4B-225ENST00000494465 IFI27P40305 119 aaPredicted RBP12.23□□□□□ -0.45
ATG4B-225ENST00000494465 TDRG1Q3Y452 100 aa12.23□□□□□ -0.45
ATG4B-225ENST00000494465 MAP6D1Q9H9H5 199 aa12.23□□□□□ -0.45
ATG4B-225ENST00000494465 HLA-DRB4X5D2U9 266 aa12.23□□□□□ -0.45
ATG4B-225ENST00000494465 H3BMM0 161 aa12.23□□□□□ -0.45
ATG4B-225ENST00000494465 FAM159AQ6UWV7 190 aa12.23□□□□□ -0.45
ATG4B-225ENST00000494465 SPAG8Q99932 426 aaPredicted RBP12.23□□□□□ -0.45
ATG4B-225ENST00000494465 PPBPP02775 128 aa12.22□□□□□ -0.45
ATG4B-225ENST00000494465 TSPOP30536 169 aa12.22□□□□□ -0.45
ATG4B-225ENST00000494465 KRTAP10-3P60369 221 aa12.22□□□□□ -0.45
ATG4B-225ENST00000494465 ZNF664Q8N3J9 261 aa12.22□□□□□ -0.45
ATG4B-225ENST00000494465 LOC389332A0A1B0GUA5 103 aa12.22□□□□□ -0.45
ATG4B-225ENST00000494465 RBMY1BA6NDE4 496 aaKnown RBP12.22□□□□□ -0.45
ATG4B-225ENST00000494465 RBMY1EA6NEQ0 496 aaKnown RBP12.22□□□□□ -0.45
ATG4B-225ENST00000494465 M0R381 172 aa12.22□□□□□ -0.45
ATG4B-225ENST00000494465 RBMY1DP0C7P1 496 aaKnown RBP12.22□□□□□ -0.45
ATG4B-225ENST00000494465 PRSS3P2Q8NHM4 247 aa12.22□□□□□ -0.45
ATG4B-225ENST00000494465 AP5S1Q9NUS5 200 aa12.22□□□□□ -0.45
ATG4B-225ENST00000494465 PHLDA3Q9Y5J5 127 aa12.22□□□□□ -0.45
ATG4B-225ENST00000494465 TRAV25A0A0B4J276 109 aa12.21□□□□□ -0.45
ATG4B-225ENST00000494465 NIPBLQ6KC79 2804 aaeCLIP12.21□□□□□ -0.45
ATG4B-225ENST00000494465 TCF21O43680 179 aa12.21□□□□□ -0.46
ATG4B-225ENST00000494465 NXPH4O95158 308 aa12.21□□□□□ -0.46
ATG4B-225ENST00000494465 GATA1P15976 413 aaPredicted RBP12.21□□□□□ -0.46
ATG4B-225ENST00000494465 OR4C46A6NHA9 309 aa12.2□□□□□ -0.46
ATG4B-225ENST00000494465 LINC00587B1AMM8 73 aa12.2□□□□□ -0.46
ATG4B-225ENST00000494465 CRXO43186 299 aaPredicted RBP12.2□□□□□ -0.46
ATG4B-225ENST00000494465 TEX43Q6ZNM6 134 aa12.2□□□□□ -0.46
ATG4B-225ENST00000494465 LINC00173Q6ZV60 143 aa12.2□□□□□ -0.46
ATG4B-225ENST00000494465 SMIM15Q7Z3B0 74 aa12.2□□□□□ -0.46
ATG4B-225ENST00000494465 CD7P09564 240 aa12.2□□□□□ -0.46
ATG4B-225ENST00000494465 RBMY1A1P0DJD3 496 aaKnown RBP12.2□□□□□ -0.46
ATG4B-225ENST00000494465 RBMY1CP0DJD4 496 aa12.2□□□□□ -0.46
ATG4B-225ENST00000494465 RBMY1FQ15415 496 aaKnown RBP12.2□□□□□ -0.46
ATG4B-225ENST00000494465 FA2HQ7L5A8 372 aa12.2□□□□□ -0.46
ATG4B-225ENST00000494465 LAMTOR2Q9Y2Q5 125 aa12.2□□□□□ -0.46
ATG4B-225ENST00000494465 TNFRSF6BO95407 300 aa12.19□□□□□ -0.46
ATG4B-225ENST00000494465 FXYD7P58549 80 aa12.19□□□□□ -0.46
ATG4B-225ENST00000494465 PRO1933Q9H354 126 aa12.19□□□□□ -0.46
ATG4B-225ENST00000494465 C2CD3Q4AC94 2353 aa12.19□□□□□ -0.46
ATG4B-225ENST00000494465 A0A096LNJ9 63 aa12.19□□□□□ -0.46
ATG4B-225ENST00000494465 IGHV3-16A0A0C4DH30 117 aa12.19□□□□□ -0.46
ATG4B-225ENST00000494465 PKIAP61925 76 aa12.19□□□□□ -0.46
ATG4B-225ENST00000494465 NSUN5P1Q3KNT7 163 aa12.19□□□□□ -0.46
ATG4B-225ENST00000494465 ODF3L2Q3SX64 289 aa12.19□□□□□ -0.46
ATG4B-225ENST00000494465 TRAV26-2A0A0B4J265 109 aa12.18□□□□□ -0.46
ATG4B-225ENST00000494465 Q8N1Y9 231 aa12.18□□□□□ -0.46
ATG4B-225ENST00000494465 NRACQ8N912 160 aa12.18□□□□□ -0.46
ATG4B-225ENST00000494465 IGHV1OR15-1A0A075B7D0 117 aa12.18□□□□□ -0.46
ATG4B-225ENST00000494465 LEPROTL1O95214 131 aa12.18□□□□□ -0.46
ATG4B-225ENST00000494465 C9orf85Q96MD7 179 aa12.18□□□□□ -0.46
ATG4B-225ENST00000494465 BTF3P20290 206 aaKnown RBP12.17□□□□□ -0.46
ATG4B-225ENST00000494465 SPATA12Q7Z6I5 190 aa12.17□□□□□ -0.46
ATG4B-225ENST00000494465 C14orf178Q8N769 122 aaPredicted RBP12.17□□□□□ -0.46
ATG4B-225ENST00000494465 MDFICQ9P1T7 246 aa12.17□□□□□ -0.46
ATG4B-225ENST00000494465 LINC01546A6NGU7 62 aa12.16□□□□□ -0.46
ATG4B-225ENST00000494465 OR2K2Q8NGT1 345 aa12.16□□□□□ -0.46
ATG4B-225ENST00000494465 MAP1LC3AQ9H492 121 aa12.16□□□□□ -0.46
ATG4B-225ENST00000494465 DPH3P1Q9H4G8 78 aa12.16□□□□□ -0.46
ATG4B-225ENST00000494465 CRLF1O75462 422 aa12.15□□□□□ -0.46
ATG4B-225ENST00000494465 MRAP2Q96G30 205 aa12.15□□□□□ -0.46
ATG4B-225ENST00000494465 KIF25-AS1Q9Y6Z4 181 aa12.15□□□□□ -0.46
ATG4B-225ENST00000494465 IGLV2-18A0A075B6J9 118 aa12.15□□□□□ -0.46
ATG4B-225ENST00000494465 TSTD3H0UI37 97 aa12.15□□□□□ -0.46
ATG4B-225ENST00000494465 NDUFA11Q86Y39 141 aa12.15□□□□□ -0.46
ATG4B-225ENST00000494465 DEFB125Q8N687 156 aa12.15□□□□□ -0.46
ATG4B-225ENST00000494465 PRSS47A8MTI9 375 aa12.14□□□□□ -0.47
ATG4B-225ENST00000494465 SAP30O75446 220 aa12.14□□□□□ -0.47
ATG4B-225ENST00000494465 LINC00315P59091 139 aa12.14□□□□□ -0.47
ATG4B-225ENST00000494465 AP1S3Q96PC3 154 aa12.14□□□□□ -0.47
ATG4B-225ENST00000494465 TMEM70Q9BUB7 260 aa12.14□□□□□ -0.47
ATG4B-225ENST00000494465 KIR2DL5BA0A0G2JN68 375 aa12.14□□□□□ -0.47
ATG4B-225ENST00000494465 KIR2DL5BA0A0G2JPC4 375 aa12.14□□□□□ -0.47
ATG4B-225ENST00000494465 IGLV1-51P01701 117 aa12.14□□□□□ -0.47
ATG4B-225ENST00000494465 KIR2DL5AQ8N109 375 aa12.14□□□□□ -0.47
ATG4B-225ENST00000494465 POM121L12Q8N7R1 296 aa12.14□□□□□ -0.47
ATG4B-225ENST00000494465 CLUHP3Q96NS8 147 aa12.14□□□□□ -0.47
ATG4B-225ENST00000494465 JPT2Q9H910 190 aa12.13□□□□□ -0.47
ATG4B-225ENST00000494465 SYS1-DBNDD2H3BUS1 97 aa12.13□□□□□ -0.47
ATG4B-225ENST00000494465 ZNF747Q9BV97 191 aa12.13□□□□□ -0.47
ATG4B-225ENST00000494465 NXT2Q9NPJ8 142 aaKnown RBP12.13□□□□□ -0.47
ATG4B-225ENST00000494465 HSPB8Q9UJY1 196 aa12.13□□□□□ -0.47
ATG4B-225ENST00000494465 RASL10AQ92737 203 aa12.12□□□□□ -0.47
ATG4B-225ENST00000494465 FLNBO75369 2602 aaKnown RBP12.12□□□□□ -0.47
ATG4B-225ENST00000494465 Q8N8P6 123 aa12.12□□□□□ -0.47
ATG4B-225ENST00000494465 DDTP30046 118 aa12.11□□□□□ -0.47
ATG4B-225ENST00000494465 VAMP8Q9BV40 100 aa12.11□□□□□ -0.47
ATG4B-225ENST00000494465 PAM16Q9Y3D7 125 aa12.11□□□□□ -0.47
ATG4B-225ENST00000494465 OR11H12B2RN74 326 aa12.11□□□□□ -0.47
ATG4B-225ENST00000494465 HBDP02042 147 aa12.11□□□□□ -0.47
ATG4B-225ENST00000494465 TRGV11A0A075B6L2 103 aa12.1□□□□□ -0.47
ATG4B-225ENST00000494465 CBY3A6NI87 242 aa12.1□□□□□ -0.47
ATG4B-225ENST00000494465 MGPP08493 103 aa12.1□□□□□ -0.47
ATG4B-225ENST00000494465 MAP1LC3CQ9BXW4 147 aa12.1□□□□□ -0.47
ATG4B-225ENST00000494465 PRM2P04554 102 aa12.1□□□□□ -0.47
ATG4B-225ENST00000494465 TRPT1Q86TN4 253 aaKnown RBP12.1□□□□□ -0.47
ATG4B-225ENST00000494465 ATOH7Q8N100 152 aa12.1□□□□□ -0.47
ATG4B-225ENST00000494465 RPL39LQ96EH5 51 aaKnown RBP12.1□□□□□ -0.47
ATG4B-225ENST00000494465 LINC00482Q8N8I6 264 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms