RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 OR10G7Q8NGN6 311 aa11.52□□□□□ -0.57
COL9A1-210ENST00000493682 PTH2Q96A98 100 aa11.52□□□□□ -0.57
COL9A1-210ENST00000493682 SERTM2A0A1B0GWG4 89 aa11.51□□□□□ -0.57
COL9A1-210ENST00000493682 GCGP01275 180 aa11.51□□□□□ -0.57
COL9A1-210ENST00000493682 TCRAP04437 139 aa11.51□□□□□ -0.57
COL9A1-210ENST00000493682 ARL14EPLP0DKL9 152 aa11.51□□□□□ -0.57
COL9A1-210ENST00000493682 IFITM3Q01628 133 aa11.51□□□□□ -0.57
COL9A1-210ENST00000493682 LCE2AQ5TA79 106 aaPredicted RBP11.51□□□□□ -0.57
COL9A1-210ENST00000493682 MARVELD1Q9BSK0 173 aa11.51□□□□□ -0.57
COL9A1-210ENST00000493682 SSNA1O43805 119 aa11.5□□□□□ -0.57
COL9A1-210ENST00000493682 PLA2G1BP04054 148 aaKnown RBP11.5□□□□□ -0.57
COL9A1-210ENST00000493682 RNASE3P12724 160 aaKnown RBP11.5□□□□□ -0.57
COL9A1-210ENST00000493682 C5orf17Q8NAS9 161 aa11.5□□□□□ -0.57
COL9A1-210ENST00000493682 PSG8Q9UQ74 426 aa11.5□□□□□ -0.57
COL9A1-210ENST00000493682 LECT2O14960 151 aa11.49□□□□□ -0.57
COL9A1-210ENST00000493682 IGLV2-11P01706 119 aa11.49□□□□□ -0.57
COL9A1-210ENST00000493682 DNAH8Q96JB1 4490 aa11.48□□□□□ -0.57
COL9A1-210ENST00000493682 TRAV8-3A0A0A6YYJ7 113 aa11.48□□□□□ -0.57
COL9A1-210ENST00000493682 K7EQM0 130 aa11.48□□□□□ -0.57
COL9A1-210ENST00000493682 CDC34P49427 236 aaPredicted RBP11.48□□□□□ -0.57
COL9A1-210ENST00000493682 SMUG1Q53HV7 270 aa11.48□□□□□ -0.57
COL9A1-210ENST00000493682 SUN5Q8TC36 379 aa11.48□□□□□ -0.57
COL9A1-210ENST00000493682 GAGE12JA6NER3 117 aa11.47□□□□□ -0.57
COL9A1-210ENST00000493682 STAG3L2P0CL84 134 aa11.47□□□□□ -0.57
COL9A1-210ENST00000493682 STAG3L3P0CL85 134 aa11.47□□□□□ -0.57
COL9A1-210ENST00000493682 LINC00694P0DN24 101 aa11.47□□□□□ -0.57
COL9A1-210ENST00000493682 GAGE1Q13065 139 aa11.47□□□□□ -0.57
COL9A1-210ENST00000493682 GAGE4Q13068 117 aa11.47□□□□□ -0.57
COL9A1-210ENST00000493682 GAGE5Q13069 117 aa11.47□□□□□ -0.57
COL9A1-210ENST00000493682 ZFP69Q49AA0 526 aa11.47□□□□□ -0.57
COL9A1-210ENST00000493682 GAGE13Q4V321 117 aa11.47□□□□□ -0.57
COL9A1-210ENST00000493682 DAZ4Q86SG3 579 aaKnown RBP11.47□□□□□ -0.57
COL9A1-210ENST00000493682 PRNTQ86SH4 94 aa11.47□□□□□ -0.57
COL9A1-210ENST00000493682 SH3BGRL3Q9H299 93 aa11.47□□□□□ -0.57
COL9A1-210ENST00000493682 PARLQ9H300 379 aa11.47□□□□□ -0.57
COL9A1-210ENST00000493682 DAZ3Q9NR90 486 aaKnown RBP11.47□□□□□ -0.57
COL9A1-210ENST00000493682 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.46□□□□□ -0.57
COL9A1-210ENST00000493682 KRTAP29-1A8MX34 341 aaPredicted RBP11.46□□□□□ -0.57
COL9A1-210ENST00000493682 GCHFRP30047 84 aa11.46□□□□□ -0.57
COL9A1-210ENST00000493682 FLI1Q01543 452 aaPredicted RBP11.46□□□□□ -0.57
COL9A1-210ENST00000493682 ZFP2Q6ZN57 461 aa11.46□□□□□ -0.57
COL9A1-210ENST00000493682 RAB24Q969Q5 203 aa11.46□□□□□ -0.57
COL9A1-210ENST00000493682 Q9UF83 564 aa11.46□□□□□ -0.57
COL9A1-210ENST00000493682 EPDR1Q9UM22 224 aa11.46□□□□□ -0.57
COL9A1-210ENST00000493682 GGTLC3B5MD39 225 aa11.45□□□□□ -0.58
COL9A1-210ENST00000493682 SUMO1P63165 101 aaKnown RBP11.45□□□□□ -0.58
COL9A1-210ENST00000493682 TOR2AQ5JU69 321 aa11.45□□□□□ -0.58
COL9A1-210ENST00000493682 OR2T35Q8NGX2 323 aa11.45□□□□□ -0.58
COL9A1-210ENST00000493682 OR2G3Q8NGZ4 309 aa11.45□□□□□ -0.58
COL9A1-210ENST00000493682 DEFB104AQ8WTQ1 72 aa11.45□□□□□ -0.58
COL9A1-210ENST00000493682 IGKV3D-20A0A0C4DH25 116 aa11.44□□□□□ -0.58
COL9A1-210ENST00000493682 A8MWV9 139 aa11.44□□□□□ -0.58
COL9A1-210ENST00000493682 LGALSLQ3ZCW2 172 aaPredicted RBP11.44□□□□□ -0.58
COL9A1-210ENST00000493682 LINC01620Q4KN68 170 aa11.44□□□□□ -0.58
COL9A1-210ENST00000493682 PIK3CD-AS1Q5SR53 167 aa11.44□□□□□ -0.58
COL9A1-210ENST00000493682 SAPCD1Q5SSQ6 148 aa11.44□□□□□ -0.58
COL9A1-210ENST00000493682 CYB561D1Q8N8Q1 229 aa11.44□□□□□ -0.58
COL9A1-210ENST00000493682 HSD17B11Q8NBQ5 300 aa11.44□□□□□ -0.58
COL9A1-210ENST00000493682 BAALCQ8WXS3 180 aa11.44□□□□□ -0.58
COL9A1-210ENST00000493682 LINC00479Q96M42 142 aa11.44□□□□□ -0.58
COL9A1-210ENST00000493682 A0A087WWC5 75 aa11.43□□□□□ -0.58
COL9A1-210ENST00000493682 S100A4P26447 101 aaKnown RBP11.43□□□□□ -0.58
COL9A1-210ENST00000493682 UFSP1Q6NVU6 142 aa11.43□□□□□ -0.58
COL9A1-210ENST00000493682 C14orf178Q8N769 122 aaPredicted RBP11.43□□□□□ -0.58
COL9A1-210ENST00000493682 SAMD10Q9BYL1 202 aa11.43□□□□□ -0.58
COL9A1-210ENST00000493682 SCXQ7RTU7 201 aa11.42□□□□□ -0.58
COL9A1-210ENST00000493682 PSMG3Q9BT73 122 aaPredicted RBP11.42□□□□□ -0.58
COL9A1-210ENST00000493682 JPT2Q9H910 190 aa11.42□□□□□ -0.58
COL9A1-210ENST00000493682 TMEM167BQ9NRX6 74 aa11.42□□□□□ -0.58
COL9A1-210ENST00000493682 COX11Q9Y6N1 276 aa11.42□□□□□ -0.58
COL9A1-210ENST00000493682 CXorf1O96002 111 aa11.41□□□□□ -0.58
COL9A1-210ENST00000493682 ATP6V0CP27449 155 aa11.41□□□□□ -0.58
COL9A1-210ENST00000493682 ASIPP42127 132 aa11.41□□□□□ -0.58
COL9A1-210ENST00000493682 FGF8P55075 233 aaPredicted RBP11.41□□□□□ -0.58
COL9A1-210ENST00000493682 DNAJC30Q96LL9 226 aa11.41□□□□□ -0.58
COL9A1-210ENST00000493682 TRAV34A0A0B4J273 112 aa11.4□□□□□ -0.58
COL9A1-210ENST00000493682 RBFOX3A6NFN3 312 aa11.4□□□□□ -0.58
COL9A1-210ENST00000493682 MBP02144 154 aa11.4□□□□□ -0.58
COL9A1-210ENST00000493682 RMI2Q96E14 147 aa11.4□□□□□ -0.58
COL9A1-210ENST00000493682 IL36BQ9NZH7 164 aa11.4□□□□□ -0.58
COL9A1-210ENST00000493682 URGCP-MRPS24S4R325 110 aa11.4□□□□□ -0.58
COL9A1-210ENST00000493682 ARL2-SNX15V9GYD0 113 aa11.4□□□□□ -0.58
COL9A1-210ENST00000493682 RNF222A6NCQ9 220 aa11.39□□□□□ -0.59
COL9A1-210ENST00000493682 FABP5P3A8MUU1 101 aa11.39□□□□□ -0.59
COL9A1-210ENST00000493682 DEFA1P59665 94 aa11.39□□□□□ -0.59
COL9A1-210ENST00000493682 DEFA3P59666 94 aa11.39□□□□□ -0.59
COL9A1-210ENST00000493682 SERF2P84101 59 aa11.39□□□□□ -0.59
COL9A1-210ENST00000493682 NIT1Q86X76 327 aa11.39□□□□□ -0.59
COL9A1-210ENST00000493682 Q8N976 141 aa11.39□□□□□ -0.59
COL9A1-210ENST00000493682 ACTR3CQ9C0K3 210 aaPredicted RBP11.39□□□□□ -0.59
COL9A1-210ENST00000493682 IGKV2D-24A0A075B6R9 120 aa11.38□□□□□ -0.59
COL9A1-210ENST00000493682 A0A1W2PRE2 83 aa11.38□□□□□ -0.59
COL9A1-210ENST00000493682 B4DEV8 164 aa11.38□□□□□ -0.59
COL9A1-210ENST00000493682 H3BVH4 76 aa11.38□□□□□ -0.59
COL9A1-210ENST00000493682 KRTAP10-4P60372 401 aaPredicted RBP11.38□□□□□ -0.59
COL9A1-210ENST00000493682 CHAC1Q9BUX1 264 aa11.38□□□□□ -0.59
COL9A1-210ENST00000493682 KLK12Q9UKR0 248 aa11.38□□□□□ -0.59
COL9A1-210ENST00000493682 RHODO00212 210 aa11.37□□□□□ -0.59
COL9A1-210ENST00000493682 SEC11BP0C7V7 166 aa11.37□□□□□ -0.59
COL9A1-210ENST00000493682 AQP10Q96PS8 301 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms