RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 RAB14P61106 215 aa8.17□□□□□ -1.1
CTSA-209ENST00000493522 RPL19P84098 196 aaKnown RBP8.17□□□□□ -1.1
CTSA-209ENST00000493522 LINC01559Q495D7 138 aa8.17□□□□□ -1.1
CTSA-209ENST00000493522 TMEM88Q6PEY1 159 aa8.17□□□□□ -1.1
CTSA-209ENST00000493522 SMIM12Q96EX1 92 aa8.17□□□□□ -1.1
CTSA-209ENST00000493522 C9orf85Q96MD7 179 aa8.17□□□□□ -1.1
CTSA-209ENST00000493522 C9JCJ5 164 aa8.16□□□□□ -1.1
CTSA-209ENST00000493522 IGLV2-8P01709 118 aa8.16□□□□□ -1.1
CTSA-209ENST00000493522 IGHV3-53P01767 116 aa8.16□□□□□ -1.1
CTSA-209ENST00000493522 NDUFAF3Q9BU61 184 aa8.16□□□□□ -1.1
CTSA-209ENST00000493522 SRP19P09132 144 aaKnown RBP8.15□□□□□ -1.1
CTSA-209ENST00000493522 RNASE3P12724 160 aaKnown RBP8.15□□□□□ -1.1
CTSA-209ENST00000493522 TCTAP57738 103 aa8.15□□□□□ -1.1
CTSA-209ENST00000493522 DAZAP1Q96EP5 407 aaKnown RBP8.15□□□□□ -1.1
CTSA-209ENST00000493522 FAM210BQ96KR6 192 aa8.15□□□□□ -1.1
CTSA-209ENST00000493522 C18orf15Q96N68 181 aa8.15□□□□□ -1.1
CTSA-209ENST00000493522 SMIM7Q9BQ49 75 aa8.15□□□□□ -1.1
CTSA-209ENST00000493522 BIN3Q9NQY0 253 aa8.15□□□□□ -1.1
CTSA-209ENST00000493522 APLNQ9ULZ1 77 aa8.15□□□□□ -1.1
CTSA-209ENST00000493522 NDUFS6O75380 124 aaKnown RBP8.14□□□□□ -1.11
CTSA-209ENST00000493522 HOXA5P20719 270 aa8.14□□□□□ -1.11
CTSA-209ENST00000493522 PEA15Q15121 130 aa8.14□□□□□ -1.11
CTSA-209ENST00000493522 ZNF876PQ49A33 203 aa8.14□□□□□ -1.11
CTSA-209ENST00000493522 RASL10AQ92737 203 aa8.14□□□□□ -1.11
CTSA-209ENST00000493522 TRAV26-1A0A087WT03 109 aa8.13□□□□□ -1.11
CTSA-209ENST00000493522 TRAV4A0A0B4J268 109 aa8.13□□□□□ -1.11
CTSA-209ENST00000493522 A0A0J9YY99 117 aa8.13□□□□□ -1.11
CTSA-209ENST00000493522 ZNF727A8MUV8 499 aa8.13□□□□□ -1.11
CTSA-209ENST00000493522 P01737 135 aa8.13□□□□□ -1.11
CTSA-209ENST00000493522 SFTA3P0C7M3 94 aa8.13□□□□□ -1.11
CTSA-209ENST00000493522 ARMS2P0C7Q2 107 aa8.13□□□□□ -1.11
CTSA-209ENST00000493522 IFITM2Q01629 132 aa8.13□□□□□ -1.11
CTSA-209ENST00000493522 DNLZQ5SXM8 178 aa8.13□□□□□ -1.11
CTSA-209ENST00000493522 SYT8Q8NBV8 401 aa8.13□□□□□ -1.11
CTSA-209ENST00000493522 OR4C5Q8NGB2 326 aa8.13□□□□□ -1.11
CTSA-209ENST00000493522 OR2D3Q8NGH3 330 aa8.13□□□□□ -1.11
CTSA-209ENST00000493522 IL36BQ9NZH7 164 aa8.13□□□□□ -1.11
CTSA-209ENST00000493522 PHLDA3Q9Y5J5 127 aa8.13□□□□□ -1.11
CTSA-209ENST00000493522 DYNC1H1Q14204 4646 aaKnown RBP8.12□□□□□ -1.11
CTSA-209ENST00000493522 TRGV4A0A0C4DH28 118 aa8.12□□□□□ -1.11
CTSA-209ENST00000493522 C19orf71A6NCJ1 209 aa8.12□□□□□ -1.11
CTSA-209ENST00000493522 K7EN84 100 aa8.12□□□□□ -1.11
CTSA-209ENST00000493522 NUDT3O95989 172 aa8.12□□□□□ -1.11
CTSA-209ENST00000493522 CXCL1P09341 107 aa8.12□□□□□ -1.11
CTSA-209ENST00000493522 SRSF3P84103 164 aaKnown RBP8.12□□□□□ -1.11
CTSA-209ENST00000493522 CLLU1Q5K131 121 aa8.12□□□□□ -1.11
CTSA-209ENST00000493522 C15orf53Q8NAA6 179 aa8.12□□□□□ -1.11
CTSA-209ENST00000493522 OCC1Q8TAD7 63 aa8.12□□□□□ -1.11
CTSA-209ENST00000493522 ZNF479Q96JC4 524 aa8.12□□□□□ -1.11
CTSA-209ENST00000493522 DNAH17Q9UFH2 4485 aa8.11□□□□□ -1.11
CTSA-209ENST00000493522 DNAH11Q96DT5 4516 aa8.11□□□□□ -1.11
CTSA-209ENST00000493522 M0R381 172 aa8.11□□□□□ -1.11
CTSA-209ENST00000493522 MED14OSP0DP75 135 aa8.11□□□□□ -1.11
CTSA-209ENST00000493522 RPS20P60866 119 aaKnown RBP8.11□□□□□ -1.11
CTSA-209ENST00000493522 XKRY2A2RUG3 117 aa8.1□□□□□ -1.11
CTSA-209ENST00000493522 C9JQL5 133 aa8.1□□□□□ -1.11
CTSA-209ENST00000493522 RS1O15537 224 aa8.1□□□□□ -1.11
CTSA-209ENST00000493522 GZMBP10144 247 aa8.1□□□□□ -1.11
CTSA-209ENST00000493522 FHL2Q14192 279 aa8.1□□□□□ -1.11
CTSA-209ENST00000493522 CFAP126Q5VTH2 177 aa8.1□□□□□ -1.11
CTSA-209ENST00000493522 UBE2DNLQ8IWF7 75 aa8.1□□□□□ -1.11
CTSA-209ENST00000493522 ZFP82Q8N141 532 aa8.1□□□□□ -1.11
CTSA-209ENST00000493522 POM121L12Q8N7R1 296 aa8.1□□□□□ -1.11
CTSA-209ENST00000493522 NUDT10Q8NFP7 164 aa8.1□□□□□ -1.11
CTSA-209ENST00000493522 PTH2Q96A98 100 aa8.1□□□□□ -1.11
CTSA-209ENST00000493522 NUDT11Q96G61 164 aa8.1□□□□□ -1.11
CTSA-209ENST00000493522 TPPP3Q9BW30 176 aa8.1□□□□□ -1.11
CTSA-209ENST00000493522 RNASE7Q9H1E1 156 aaKnown RBP8.1□□□□□ -1.11
CTSA-209ENST00000493522 SMDT1Q9H4I9 107 aa8.1□□□□□ -1.11
CTSA-209ENST00000493522 RPP21Q9H633 154 aaKnown RBP8.1□□□□□ -1.11
CTSA-209ENST00000493522 LY96Q9Y6Y9 160 aa8.1□□□□□ -1.11
CTSA-209ENST00000493522 ABCA13Q86UQ4 5058 aa8.1□□□□□ -1.11
CTSA-209ENST00000493522 IGHV3-73A0A0B4J1V6 119 aa8.09□□□□□ -1.11
CTSA-209ENST00000493522 A8MWV9 139 aa8.09□□□□□ -1.11
CTSA-209ENST00000493522 PAX4O43316 350 aa8.09□□□□□ -1.11
CTSA-209ENST00000493522 FAM74A3Q4VXF1 159 aa8.09□□□□□ -1.11
CTSA-209ENST00000493522 LINC00336Q6ZUF6 198 aa8.09□□□□□ -1.11
CTSA-209ENST00000493522 LINC01551Q86U37 167 aa8.09□□□□□ -1.11
CTSA-209ENST00000493522 FER1L6-AS1Q8NA97 138 aa8.09□□□□□ -1.11
CTSA-209ENST00000493522 OR10AG1Q8NH19 301 aa8.09□□□□□ -1.11
CTSA-209ENST00000493522 SCRT2Q9NQ03 307 aa8.09□□□□□ -1.11
CTSA-209ENST00000493522 PRO0255Q9UI72 69 aa8.09□□□□□ -1.11
CTSA-209ENST00000493522 MUC21A0A0G2JKD1 596 aa8.08□□□□□ -1.12
CTSA-209ENST00000493522 MUC21A0A140T8X8 626 aa8.08□□□□□ -1.12
CTSA-209ENST00000493522 SNAI2O43623 268 aa8.08□□□□□ -1.12
CTSA-209ENST00000493522 GATCO43716 136 aaKnown RBP8.08□□□□□ -1.12
CTSA-209ENST00000493522 OR5AL1P0C617 328 aa8.08□□□□□ -1.12
CTSA-209ENST00000493522 P0DMU3 169 aa8.08□□□□□ -1.12
CTSA-209ENST00000493522 FAM231AP0DMU4 169 aa8.08□□□□□ -1.12
CTSA-209ENST00000493522 FAM231CP0DMU5 169 aa8.08□□□□□ -1.12
CTSA-209ENST00000493522 CRYBA4P53673 196 aa8.08□□□□□ -1.12
CTSA-209ENST00000493522 ERVFC1-1P60608 527 aa8.08□□□□□ -1.12
CTSA-209ENST00000493522 SSTP61278 116 aa8.08□□□□□ -1.12
CTSA-209ENST00000493522 SLAQ13239 276 aa8.08□□□□□ -1.12
CTSA-209ENST00000493522 ADIRFQ15847 76 aa8.08□□□□□ -1.12
CTSA-209ENST00000493522 SOHLH1Q5JUK2 328 aa8.08□□□□□ -1.12
CTSA-209ENST00000493522 PIK3CD-AS1Q5SR53 167 aa8.08□□□□□ -1.12
CTSA-209ENST00000493522 FAM74A4Q5TZK3 123 aa8.08□□□□□ -1.12
CTSA-209ENST00000493522 ZNF575Q86XF7 245 aa8.08□□□□□ -1.12
CTSA-209ENST00000493522 VSIG2Q96IQ7 327 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms