RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 PSG9Q00887 426 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 SSBP1Q04837 148 aaKnown RBP1.89□□□□□ -2.11
PTCD3-218ENST00000493430 BAXQ07812 192 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 SURF2Q15527 256 aaPredicted RBP1.89□□□□□ -2.11
PTCD3-218ENST00000493430 TMEM128Q5BJH2 165 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 Q5BKY6 102 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 LGALS9CQ6DKI2 356 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 FOXI2Q6ZQN5 318 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 LINC00305Q7Z4B0 112 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 MTURNQ8N3F0 131 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 OR8A1Q8NGG7 326 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 RPUSD4Q96CM3 377 aaKnown RBP1.89□□□□□ -2.11
PTCD3-218ENST00000493430 TMEM208Q9BTX3 173 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 TMEM147Q9BVK8 224 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 SLC25A2Q9BXI2 301 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 NOP10Q9NPE3 64 aaKnown RBP1.89□□□□□ -2.11
PTCD3-218ENST00000493430 HIGD1AQ9Y241 93 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 LINC00588Q9Y4M8 146 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 KLF12Q9Y4X4 402 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 PXMP4Q9Y6I8 212 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 PCLOQ9Y6V0 5065 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 RYR1P21817 5038 aa1.89□□□□□ -2.11
PTCD3-218ENST00000493430 TRAV30A0A087WSZ9 112 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 IGHV3-73A0A0B4J1V6 119 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 TRAV2A0A0B4J234 112 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 A0A1B0GV50 99 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 A8MTW9 85 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 ZNF701M0R085 212 aaPredicted RBP1.88□□□□□ -2.11
PTCD3-218ENST00000493430 COX7A2P2O60397 106 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 INSP01308 110 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 HBE1P02100 147 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 IGLC2P0DOY2 106 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 MIFP14174 115 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 GPX4P36969 197 aaPredicted RBP1.88□□□□□ -2.11
PTCD3-218ENST00000493430 RANBP1P43487 201 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 H2BFSP57053 126 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 DEFA1P59665 94 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 RAB11AP62491 216 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 OR5I1Q13606 314 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 WFDC2Q14508 124 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 PSG3Q16557 428 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 RRN3P1Q2M238 152 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 EBLN2Q6P2I7 272 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 MORN3Q6PF18 240 aaPredicted RBP1.88□□□□□ -2.11
PTCD3-218ENST00000493430 C12orf45Q8N5I9 185 aaPredicted RBP1.88□□□□□ -2.11
PTCD3-218ENST00000493430 OR5C1Q8NGR4 320 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 ZNF431Q8TF32 576 aaPredicted RBP1.88□□□□□ -2.11
PTCD3-218ENST00000493430 MITD1Q8WV92 249 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 SMIM8Q96KF7 97 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 FAM167A-AS1Q96KT0 104 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 IGF2BP2-AS1Q96M15 143 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 LINC01587Q99440 93 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 KIR2DL4Q99706 377 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 AGPAT4-IT1Q9H0P7 198 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 SH3BGRL3Q9H299 93 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 ZNF331Q9NQX6 463 aaPredicted RBP1.88□□□□□ -2.11
PTCD3-218ENST00000493430 RPRMQ9NS64 109 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 SLC39A9Q9NUM3 307 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 NAGKQ9UJ70 344 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 KCNIP3Q9Y2W7 256 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 ALG5Q9Y673 324 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 U3KQ87 197 aa1.88□□□□□ -2.11
PTCD3-218ENST00000493430 LRP1BQ9NZR2 4599 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 TRGV1A0A0A0MS02 117 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 DUXBA0A1W2PPF3 345 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 SNRPGP15A8MWD9 76 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 E9PLD3 99 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 G3V3Q6 166 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 ISLRO14498 428 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 HYPMO75409 117 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 ATG12O94817 140 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 SLC25A6P12236 298 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 RNASE4P34096 147 aaKnown RBP1.87□□□□□ -2.11
PTCD3-218ENST00000493430 FAUP35544 74 aaKnown RBP1.87□□□□□ -2.11
PTCD3-218ENST00000493430 GALR1P47211 349 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 ZNF80P51504 273 aaPredicted RBP1.87□□□□□ -2.11
PTCD3-218ENST00000493430 FGF8P55075 233 aaPredicted RBP1.87□□□□□ -2.11
PTCD3-218ENST00000493430 LINC00315P59091 139 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 SNRPD3P62318 126 aaKnown RBP1.87□□□□□ -2.11
PTCD3-218ENST00000493430 IL15RAQ13261 267 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 OXA1LQ15070 435 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 ESRGQ1W209 222 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 C10orf113Q5VZT2 155 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 TMEM144Q7Z5S9 345 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 WFDC10BQ8IUB3 73 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 TMEM252Q8N6L7 170 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 ZFAND2AQ8N6M9 145 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 C11orf72Q8NBR9 251 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 ZNRF2Q8NHG8 242 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 ENKURQ8TC29 256 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 LRRC20Q8TCA0 184 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 DEFB104AQ8WTQ1 72 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 FXYD5Q96DB9 178 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 TVP23CQ96ET8 276 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 NARS2Q96I59 477 aaKnown RBP1.87□□□□□ -2.11
PTCD3-218ENST00000493430 HYLS1Q96M11 299 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 CIB3Q96Q77 187 aaPredicted RBP1.87□□□□□ -2.11
PTCD3-218ENST00000493430 SLC25A21Q9BQT8 299 aaPredicted RBP1.87□□□□□ -2.11
PTCD3-218ENST00000493430 RNF126Q9BV68 326 aa1.87□□□□□ -2.11
PTCD3-218ENST00000493430 NPCDR1Q9BY65 106 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms