RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 CD7P09564 240 aa6.76□□□□□ -1.33
SMARCC1-208ENST00000492896 CMC4P56277 68 aaPredicted RBP6.76□□□□□ -1.33
SMARCC1-208ENST00000492896 FXYD7P58549 80 aa6.76□□□□□ -1.33
SMARCC1-208ENST00000492896 ZNF124Q15973 351 aa6.76□□□□□ -1.33
SMARCC1-208ENST00000492896 ODF3L2Q3SX64 289 aa6.76□□□□□ -1.33
SMARCC1-208ENST00000492896 Q6ZWC4 215 aa6.76□□□□□ -1.33
SMARCC1-208ENST00000492896 FA2HQ7L5A8 372 aa6.76□□□□□ -1.33
SMARCC1-208ENST00000492896 CLUHP3Q96NS8 147 aa6.76□□□□□ -1.33
SMARCC1-208ENST00000492896 AP1S3Q96PC3 154 aa6.76□□□□□ -1.33
SMARCC1-208ENST00000492896 LAMTOR2Q9Y2Q5 125 aa6.76□□□□□ -1.33
SMARCC1-208ENST00000492896 MUC4Q99102 2169 aa6.76□□□□□ -1.33
SMARCC1-208ENST00000492896 TRGV11A0A075B6L2 103 aa6.75□□□□□ -1.33
SMARCC1-208ENST00000492896 IGHV3-16A0A0C4DH30 117 aa6.75□□□□□ -1.33
SMARCC1-208ENST00000492896 NPYP01303 97 aa6.75□□□□□ -1.33
SMARCC1-208ENST00000492896 IGLV1-51P01701 117 aa6.75□□□□□ -1.33
SMARCC1-208ENST00000492896 LINC00614P0C842 121 aa6.75□□□□□ -1.33
SMARCC1-208ENST00000492896 EVI2AP22794 236 aa6.75□□□□□ -1.33
SMARCC1-208ENST00000492896 CDPF1Q6NVV7 123 aa6.75□□□□□ -1.33
SMARCC1-208ENST00000492896 STHQ8IWL8 128 aa6.75□□□□□ -1.33
SMARCC1-208ENST00000492896 FAM19A2Q8N3H0 131 aa6.75□□□□□ -1.33
SMARCC1-208ENST00000492896 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.75□□□□□ -1.33
SMARCC1-208ENST00000492896 PRSS3P2Q8NHM4 247 aa6.75□□□□□ -1.33
SMARCC1-208ENST00000492896 MAP1LC3AQ9H492 121 aa6.75□□□□□ -1.33
SMARCC1-208ENST00000492896 DPH3P1Q9H4G8 78 aa6.75□□□□□ -1.33
SMARCC1-208ENST00000492896 IGHV1-24A0A0C4DH33 117 aa6.74□□□□□ -1.33
SMARCC1-208ENST00000492896 CRXO43186 299 aaPredicted RBP6.74□□□□□ -1.33
SMARCC1-208ENST00000492896 SCGB1D1O95968 90 aa6.74□□□□□ -1.33
SMARCC1-208ENST00000492896 INSP01308 110 aa6.74□□□□□ -1.33
SMARCC1-208ENST00000492896 KRTDAPP60985 99 aa6.74□□□□□ -1.33
SMARCC1-208ENST00000492896 LINC00482Q8N8I6 264 aa6.74□□□□□ -1.33
SMARCC1-208ENST00000492896 SYT8Q8NBV8 401 aa6.74□□□□□ -1.33
SMARCC1-208ENST00000492896 MRAP2Q96G30 205 aa6.74□□□□□ -1.33
SMARCC1-208ENST00000492896 C9orf85Q96MD7 179 aa6.74□□□□□ -1.33
SMARCC1-208ENST00000492896 C20orf144Q9BQM9 153 aa6.74□□□□□ -1.33
SMARCC1-208ENST00000492896 AP5S1Q9NUS5 200 aa6.74□□□□□ -1.33
SMARCC1-208ENST00000492896 NSD1Q96L73 2696 aaPredicted RBP6.74□□□□□ -1.33
SMARCC1-208ENST00000492896 LOC389332A0A1B0GUA5 103 aa6.73□□□□□ -1.33
SMARCC1-208ENST00000492896 CBY3A6NI87 242 aa6.73□□□□□ -1.33
SMARCC1-208ENST00000492896 PCP4L1A6NKN8 68 aa6.73□□□□□ -1.33
SMARCC1-208ENST00000492896 SPRY2O43597 315 aa6.73□□□□□ -1.33
SMARCC1-208ENST00000492896 MGPP08493 103 aa6.73□□□□□ -1.33
SMARCC1-208ENST00000492896 RBMY1A1P0DJD3 496 aaKnown RBP6.73□□□□□ -1.33
SMARCC1-208ENST00000492896 RBMY1CP0DJD4 496 aa6.73□□□□□ -1.33
SMARCC1-208ENST00000492896 IFI27P40305 119 aaPredicted RBP6.73□□□□□ -1.33
SMARCC1-208ENST00000492896 S100A12P80511 92 aa6.73□□□□□ -1.33
SMARCC1-208ENST00000492896 RBMY1FQ15415 496 aaKnown RBP6.73□□□□□ -1.33
SMARCC1-208ENST00000492896 TRPT1Q86TN4 253 aaKnown RBP6.73□□□□□ -1.33
SMARCC1-208ENST00000492896 Q8N1Y9 231 aa6.73□□□□□ -1.33
SMARCC1-208ENST00000492896 FAM110AQ9BQ89 295 aa6.73□□□□□ -1.33
SMARCC1-208ENST00000492896 TNFRSF6BO95407 300 aa6.72□□□□□ -1.33
SMARCC1-208ENST00000492896 C3orf79P0CE67 100 aa6.72□□□□□ -1.33
SMARCC1-208ENST00000492896 SMIM17P0DL12 118 aa6.72□□□□□ -1.33
SMARCC1-208ENST00000492896 PMCHL1Q16048 86 aa6.72□□□□□ -1.33
SMARCC1-208ENST00000492896 BEAN1Q3B7T3 259 aa6.72□□□□□ -1.33
SMARCC1-208ENST00000492896 C14orf178Q8N769 122 aaPredicted RBP6.72□□□□□ -1.33
SMARCC1-208ENST00000492896 NXT2Q9NPJ8 142 aaKnown RBP6.72□□□□□ -1.33
SMARCC1-208ENST00000492896 GSN-AS1Q9NRJ2 163 aa6.72□□□□□ -1.33
SMARCC1-208ENST00000492896 MDFICQ9P1T7 246 aa6.72□□□□□ -1.33
SMARCC1-208ENST00000492896 C2CD3Q4AC94 2353 aa6.72□□□□□ -1.33
SMARCC1-208ENST00000492896 SETXQ7Z333 2677 aaKnown RBP6.72□□□□□ -1.33
SMARCC1-208ENST00000492896 HIVEP1P15822 2718 aa6.71□□□□□ -1.33
SMARCC1-208ENST00000492896 GAS8-AS1O95177 125 aa6.71□□□□□ -1.34
SMARCC1-208ENST00000492896 LEPROTL1O95214 131 aa6.71□□□□□ -1.34
SMARCC1-208ENST00000492896 GATA1P15976 413 aaPredicted RBP6.71□□□□□ -1.34
SMARCC1-208ENST00000492896 ZNF415Q09FC8 603 aa6.71□□□□□ -1.34
SMARCC1-208ENST00000492896 NRACQ8N912 160 aa6.71□□□□□ -1.34
SMARCC1-208ENST00000492896 CITED1Q99966 193 aa6.71□□□□□ -1.34
SMARCC1-208ENST00000492896 LINC00467Q9BRT7 94 aa6.71□□□□□ -1.34
SMARCC1-208ENST00000492896 HSPB8Q9UJY1 196 aa6.71□□□□□ -1.34
SMARCC1-208ENST00000492896 NF1P21359 2839 aa6.71□□□□□ -1.34
SMARCC1-208ENST00000492896 TRAV26-2A0A0B4J265 109 aa6.7□□□□□ -1.34
SMARCC1-208ENST00000492896 HBDP02042 147 aa6.7□□□□□ -1.34
SMARCC1-208ENST00000492896 BTF3P20290 206 aaKnown RBP6.7□□□□□ -1.34
SMARCC1-208ENST00000492896 NUTF2P61970 127 aaKnown RBP6.7□□□□□ -1.34
SMARCC1-208ENST00000492896 C9orf66Q5T8R8 295 aa6.7□□□□□ -1.34
SMARCC1-208ENST00000492896 POM121L12Q8N7R1 296 aa6.7□□□□□ -1.34
SMARCC1-208ENST00000492896 Q8N8P6 123 aa6.7□□□□□ -1.34
SMARCC1-208ENST00000492896 Q8N976 141 aa6.7□□□□□ -1.34
SMARCC1-208ENST00000492896 LINC01587Q99440 93 aa6.7□□□□□ -1.34
SMARCC1-208ENST00000492896 KIF25-AS1Q9Y6Z4 181 aa6.7□□□□□ -1.34
SMARCC1-208ENST00000492896 F8P00451 2351 aa6.69□□□□□ -1.34
SMARCC1-208ENST00000492896 LINC01546A6NGU7 62 aa6.69□□□□□ -1.34
SMARCC1-208ENST00000492896 PRSS47A8MTI9 375 aa6.69□□□□□ -1.34
SMARCC1-208ENST00000492896 PPP1R17O96001 155 aa6.69□□□□□ -1.34
SMARCC1-208ENST00000492896 INSL3P51460 131 aa6.69□□□□□ -1.34
SMARCC1-208ENST00000492896 TEX43Q6ZNM6 134 aa6.69□□□□□ -1.34
SMARCC1-208ENST00000492896 DEFB125Q8N687 156 aa6.69□□□□□ -1.34
SMARCC1-208ENST00000492896 TMEM70Q9BUB7 260 aa6.69□□□□□ -1.34
SMARCC1-208ENST00000492896 C19orf73Q9NVV2 129 aa6.69□□□□□ -1.34
SMARCC1-208ENST00000492896 XCL2Q9UBD3 114 aa6.69□□□□□ -1.34
SMARCC1-208ENST00000492896 A0A087WWL8 130 aa6.68□□□□□ -1.34
SMARCC1-208ENST00000492896 A0A096LNJ9 63 aa6.68□□□□□ -1.34
SMARCC1-208ENST00000492896 C20orf202A1L168 122 aa6.68□□□□□ -1.34
SMARCC1-208ENST00000492896 TSTD3H0UI37 97 aa6.68□□□□□ -1.34
SMARCC1-208ENST00000492896 HTN1P15515 57 aa6.68□□□□□ -1.34
SMARCC1-208ENST00000492896 LINC00315P59091 139 aa6.68□□□□□ -1.34
SMARCC1-208ENST00000492896 PKIAP61925 76 aa6.68□□□□□ -1.34
SMARCC1-208ENST00000492896 SUMO4Q6EEV6 95 aa6.68□□□□□ -1.34
SMARCC1-208ENST00000492896 LINC00173Q6ZV60 143 aa6.68□□□□□ -1.34
SMARCC1-208ENST00000492896 RASL10AQ92737 203 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 177 ms