RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 SCRT1Q9BWW7 348 aa6.47□□□□□ -1.37
HDAC3-212ENST00000492407 SLC35B3Q9H1N7 401 aa6.47□□□□□ -1.37
HDAC3-212ENST00000492407 PRO0628Q9UI54 55 aa6.47□□□□□ -1.37
HDAC3-212ENST00000492407 CYSLTR1Q9Y271 337 aa6.47□□□□□ -1.37
HDAC3-212ENST00000492407 YTHDF2Q9Y5A9 579 aaKnown RBP6.47□□□□□ -1.37
HDAC3-212ENST00000492407 PKHD1P08F94 4074 aa6.46□□□□□ -1.38
HDAC3-212ENST00000492407 TINCRA0A1B0GVN0 87 aa6.46□□□□□ -1.38
HDAC3-212ENST00000492407 FABP5P3A8MUU1 101 aa6.46□□□□□ -1.38
HDAC3-212ENST00000492407 PRSS46E5RG02 174 aa6.46□□□□□ -1.38
HDAC3-212ENST00000492407 NPIPB6E9PJ23 425 aa6.46□□□□□ -1.38
HDAC3-212ENST00000492407 M0R2N4 97 aa6.46□□□□□ -1.38
HDAC3-212ENST00000492407 M0R2Z0 102 aa6.46□□□□□ -1.38
HDAC3-212ENST00000492407 SYNGR2O43760 224 aa6.46□□□□□ -1.38
HDAC3-212ENST00000492407 INSP01308 110 aa6.46□□□□□ -1.38
HDAC3-212ENST00000492407 SFTA3P0C7M3 94 aa6.46□□□□□ -1.38
HDAC3-212ENST00000492407 FXYD7P58549 80 aa6.46□□□□□ -1.38
HDAC3-212ENST00000492407 C1orf134Q5TEV5 83 aa6.46□□□□□ -1.38
HDAC3-212ENST00000492407 TMEM256Q8N2U0 113 aa6.46□□□□□ -1.38
HDAC3-212ENST00000492407 OR2G3Q8NGZ4 309 aa6.46□□□□□ -1.38
HDAC3-212ENST00000492407 TMEM147Q9BVK8 224 aa6.46□□□□□ -1.38
HDAC3-212ENST00000492407 PRR13Q9NZ81 148 aa6.46□□□□□ -1.38
HDAC3-212ENST00000492407 DNAH11Q96DT5 4516 aa6.46□□□□□ -1.38
HDAC3-212ENST00000492407 PKD1P98161 4303 aa6.45□□□□□ -1.38
HDAC3-212ENST00000492407 KANTRA0A1W2PQU2 76 aa6.45□□□□□ -1.38
HDAC3-212ENST00000492407 F6UB75 175 aa6.45□□□□□ -1.38
HDAC3-212ENST00000492407 BCL2L11O43521 198 aa6.45□□□□□ -1.38
HDAC3-212ENST00000492407 SFT2D2O95562 160 aa6.45□□□□□ -1.38
HDAC3-212ENST00000492407 TRGC1P0CF51 173 aa6.45□□□□□ -1.38
HDAC3-212ENST00000492407 RPL7P18124 248 aaKnown RBP6.45□□□□□ -1.38
HDAC3-212ENST00000492407 SRIP30626 198 aa6.45□□□□□ -1.38
HDAC3-212ENST00000492407 DEFB1P60022 68 aa6.45□□□□□ -1.38
HDAC3-212ENST00000492407 UBE2MP61081 183 aaKnown RBP6.45□□□□□ -1.38
HDAC3-212ENST00000492407 ZNF415Q09FC8 603 aa6.45□□□□□ -1.38
HDAC3-212ENST00000492407 ZNF266Q14584 549 aa6.45□□□□□ -1.38
HDAC3-212ENST00000492407 BATFQ16520 125 aa6.45□□□□□ -1.38
HDAC3-212ENST00000492407 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.45□□□□□ -1.38
HDAC3-212ENST00000492407 TOMM5Q8N4H5 51 aa6.45□□□□□ -1.38
HDAC3-212ENST00000492407 C17orf77Q96MU5 243 aa6.45□□□□□ -1.38
HDAC3-212ENST00000492407 ANAPC13Q9BS18 74 aa6.45□□□□□ -1.38
HDAC3-212ENST00000492407 MAP1LC3AQ9H492 121 aa6.45□□□□□ -1.38
HDAC3-212ENST00000492407 TMEM242Q9NWH2 141 aa6.45□□□□□ -1.38
HDAC3-212ENST00000492407 ABCA13Q86UQ4 5058 aa6.44□□□□□ -1.38
HDAC3-212ENST00000492407 NAP1L6A6NFF2 107 aa6.44□□□□□ -1.38
HDAC3-212ENST00000492407 B4DEV8 164 aa6.44□□□□□ -1.38
HDAC3-212ENST00000492407 FNDC10F2Z333 226 aa6.44□□□□□ -1.38
HDAC3-212ENST00000492407 J3KT08 172 aa6.44□□□□□ -1.38
HDAC3-212ENST00000492407 CRXO43186 299 aaPredicted RBP6.44□□□□□ -1.38
HDAC3-212ENST00000492407 IAPPP10997 89 aa6.44□□□□□ -1.38
HDAC3-212ENST00000492407 ORM2P19652 201 aa6.44□□□□□ -1.38
HDAC3-212ENST00000492407 MALP21145 153 aa6.44□□□□□ -1.38
HDAC3-212ENST00000492407 UFSP1Q6NVU6 142 aa6.44□□□□□ -1.38
HDAC3-212ENST00000492407 BLNKQ8WV28 456 aa6.44□□□□□ -1.38
HDAC3-212ENST00000492407 BAALCQ8WXS3 180 aa6.44□□□□□ -1.38
HDAC3-212ENST00000492407 SHANK2-AS3Q9BTD1 123 aa6.44□□□□□ -1.38
HDAC3-212ENST00000492407 SLC25A22Q9H936 323 aa6.44□□□□□ -1.38
HDAC3-212ENST00000492407 DYNC1H1Q14204 4646 aaKnown RBP6.44□□□□□ -1.38
HDAC3-212ENST00000492407 IGLV2-18A0A075B6J9 118 aa6.43□□□□□ -1.38
HDAC3-212ENST00000492407 A0A087X0K7 114 aa6.43□□□□□ -1.38
HDAC3-212ENST00000492407 TRAV8-2A0A0B4J237 113 aa6.43□□□□□ -1.38
HDAC3-212ENST00000492407 H3BQ15 152 aa6.43□□□□□ -1.38
HDAC3-212ENST00000492407 H3BRN7 92 aa6.43□□□□□ -1.38
HDAC3-212ENST00000492407 HYPMO75409 117 aa6.43□□□□□ -1.38
HDAC3-212ENST00000492407 ATP5G1P05496 136 aa6.43□□□□□ -1.38
HDAC3-212ENST00000492407 CT45A10P0DMU9 189 aa6.43□□□□□ -1.38
HDAC3-212ENST00000492407 HTN3P15516 51 aa6.43□□□□□ -1.38
HDAC3-212ENST00000492407 ATP5G3P48201 142 aa6.43□□□□□ -1.38
HDAC3-212ENST00000492407 HNRNPA3P51991 378 aaKnown RBP6.43□□□□□ -1.38
HDAC3-212ENST00000492407 ID3Q02535 119 aa6.43□□□□□ -1.38
HDAC3-212ENST00000492407 AKR1C1Q04828 323 aa6.43□□□□□ -1.38
HDAC3-212ENST00000492407 GFI1BQ5VTD9 330 aa6.43□□□□□ -1.38
HDAC3-212ENST00000492407 MRPL54Q6P161 138 aaKnown RBP6.43□□□□□ -1.38
HDAC3-212ENST00000492407 ZNF493Q6ZR52 646 aa6.43□□□□□ -1.38
HDAC3-212ENST00000492407 SGK494Q96LW2 274 aa6.43□□□□□ -1.38
HDAC3-212ENST00000492407 VAMP8Q9BV40 100 aa6.43□□□□□ -1.38
HDAC3-212ENST00000492407 ZNF471Q9BX82 626 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-212ENST00000492407 SPANXDQ9BXN6 97 aa6.43□□□□□ -1.38
HDAC3-212ENST00000492407 SLC25A39Q9BZJ4 359 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-212ENST00000492407 SMIM3Q9BZL3 60 aa6.43□□□□□ -1.38
HDAC3-212ENST00000492407 PLA2G2EQ9NZK7 142 aa6.43□□□□□ -1.38
HDAC3-212ENST00000492407 NBDYA0A0U1RRE5 68 aa6.42□□□□□ -1.38
HDAC3-212ENST00000492407 K7EN84 100 aa6.42□□□□□ -1.38
HDAC3-212ENST00000492407 CDK2AP2O75956 126 aa6.42□□□□□ -1.38
HDAC3-212ENST00000492407 CCL18P55774 89 aa6.42□□□□□ -1.38
HDAC3-212ENST00000492407 PPP1R1AQ13522 171 aa6.42□□□□□ -1.38
HDAC3-212ENST00000492407 SPANXN5Q5MJ07 72 aa6.42□□□□□ -1.38
HDAC3-212ENST00000492407 CYP2G1PQ6ZSU1 146 aa6.42□□□□□ -1.38
HDAC3-212ENST00000492407 FAM19A5Q7Z5A7 132 aaPredicted RBP6.42□□□□□ -1.38
HDAC3-212ENST00000492407 ZNF503Q96F45 646 aa6.42□□□□□ -1.38
HDAC3-212ENST00000492407 C16orf74Q96GX8 76 aa6.42□□□□□ -1.38
HDAC3-212ENST00000492407 NPVFQ9HCQ7 196 aa6.42□□□□□ -1.38
HDAC3-212ENST00000492407 FUT9Q9Y231 359 aa6.42□□□□□ -1.38
HDAC3-212ENST00000492407 HIGD1AQ9Y241 93 aa6.42□□□□□ -1.38
HDAC3-212ENST00000492407 TRBV24-1A0A075B6N3 115 aa6.41□□□□□ -1.38
HDAC3-212ENST00000492407 PLAC8L1A1L4L8 177 aa6.41□□□□□ -1.38
HDAC3-212ENST00000492407 SPINK13Q1W4C9 94 aa6.41□□□□□ -1.38
HDAC3-212ENST00000492407 TDRG1Q3Y452 100 aa6.41□□□□□ -1.38
HDAC3-212ENST00000492407 C6orf223Q8N319 242 aa6.41□□□□□ -1.38
HDAC3-212ENST00000492407 SYT8Q8NBV8 401 aa6.41□□□□□ -1.38
HDAC3-212ENST00000492407 OR8A1Q8NGG7 326 aa6.41□□□□□ -1.38
HDAC3-212ENST00000492407 MBD3L1Q8WWY6 194 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms