RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 SRSF3P84103 164 aaKnown RBP5.68□□□□□ -1.5
APOBEC3F-204ENST00000491387 ZNF726P1Q15940 193 aa5.68□□□□□ -1.5
APOBEC3F-204ENST00000491387 TMEM183BQ1AE95 376 aa5.68□□□□□ -1.5
APOBEC3F-204ENST00000491387 SH2D6Q7Z4S9 175 aa5.68□□□□□ -1.5
APOBEC3F-204ENST00000491387 WFDC10BQ8IUB3 73 aa5.68□□□□□ -1.5
APOBEC3F-204ENST00000491387 TMEM183AQ8IXX5 376 aa5.68□□□□□ -1.5
APOBEC3F-204ENST00000491387 OR10G9Q8NGN4 311 aa5.68□□□□□ -1.5
APOBEC3F-204ENST00000491387 OR10G7Q8NGN6 311 aa5.68□□□□□ -1.5
APOBEC3F-204ENST00000491387 SPXQ9BT56 116 aa5.68□□□□□ -1.5
APOBEC3F-204ENST00000491387 KCNIP2Q9NS61 270 aa5.68□□□□□ -1.5
APOBEC3F-204ENST00000491387 LENEPQ9Y5L5 61 aa5.68□□□□□ -1.5
APOBEC3F-204ENST00000491387 TRAV1-1A0A0B4J248 108 aa5.67□□□□□ -1.5
APOBEC3F-204ENST00000491387 IGHV3-16A0A0C4DH30 117 aa5.67□□□□□ -1.5
APOBEC3F-204ENST00000491387 A0A1B0GV50 99 aa5.67□□□□□ -1.5
APOBEC3F-204ENST00000491387 GGTLC3B5MD39 225 aa5.67□□□□□ -1.5
APOBEC3F-204ENST00000491387 SMR3BP02814 79 aaPredicted RBP5.67□□□□□ -1.5
APOBEC3F-204ENST00000491387 TYMSP04818 313 aa5.67□□□□□ -1.5
APOBEC3F-204ENST00000491387 GYPEP15421 78 aa5.67□□□□□ -1.5
APOBEC3F-204ENST00000491387 CDC34P49427 236 aaPredicted RBP5.67□□□□□ -1.5
APOBEC3F-204ENST00000491387 PEA15Q15121 130 aa5.67□□□□□ -1.5
APOBEC3F-204ENST00000491387 ACOT6Q3I5F7 207 aaPredicted RBP5.67□□□□□ -1.5
APOBEC3F-204ENST00000491387 TDRG1Q3Y452 100 aa5.67□□□□□ -1.5
APOBEC3F-204ENST00000491387 Q6AWC8 147 aa5.67□□□□□ -1.5
APOBEC3F-204ENST00000491387 Q6ZSN1 163 aa5.67□□□□□ -1.5
APOBEC3F-204ENST00000491387 SFT2D1Q8WV19 159 aa5.67□□□□□ -1.5
APOBEC3F-204ENST00000491387 MBD3L1Q8WWY6 194 aa5.67□□□□□ -1.5
APOBEC3F-204ENST00000491387 TXNDC17Q9BRA2 123 aa5.67□□□□□ -1.5
APOBEC3F-204ENST00000491387 OTORQ9NRC9 128 aa5.67□□□□□ -1.5
APOBEC3F-204ENST00000491387 TRGV4A0A0C4DH28 118 aa5.66□□□□□ -1.5
APOBEC3F-204ENST00000491387 CTXND1A0A1B0GTU2 59 aa5.66□□□□□ -1.5
APOBEC3F-204ENST00000491387 MAP1LC3B2A6NCE7 125 aa5.66□□□□□ -1.5
APOBEC3F-204ENST00000491387 C9JCJ5 164 aa5.66□□□□□ -1.5
APOBEC3F-204ENST00000491387 F8W036 122 aa5.66□□□□□ -1.5
APOBEC3F-204ENST00000491387 APOC3P02656 99 aa5.66□□□□□ -1.5
APOBEC3F-204ENST00000491387 CRYGDP07320 174 aa5.66□□□□□ -1.5
APOBEC3F-204ENST00000491387 STAG3L2P0CL84 134 aa5.66□□□□□ -1.5
APOBEC3F-204ENST00000491387 STAG3L3P0CL85 134 aa5.66□□□□□ -1.5
APOBEC3F-204ENST00000491387 GCHFRP30047 84 aa5.66□□□□□ -1.5
APOBEC3F-204ENST00000491387 CCL20P78556 96 aa5.66□□□□□ -1.5
APOBEC3F-204ENST00000491387 LINC01556Q5JQF7 62 aa5.66□□□□□ -1.5
APOBEC3F-204ENST00000491387 C10orf91Q5T1B1 145 aa5.66□□□□□ -1.5
APOBEC3F-204ENST00000491387 RAB24Q969Q5 203 aa5.66□□□□□ -1.5
APOBEC3F-204ENST00000491387 SEC11CQ9BY50 192 aa5.66□□□□□ -1.5
APOBEC3F-204ENST00000491387 ACTR3CQ9C0K3 210 aaPredicted RBP5.66□□□□□ -1.5
APOBEC3F-204ENST00000491387 MAP1LC3BQ9GZQ8 125 aa5.66□□□□□ -1.5
APOBEC3F-204ENST00000491387 EIF5A2Q9GZV4 153 aaKnown RBP5.66□□□□□ -1.5
APOBEC3F-204ENST00000491387 SMDT1Q9H4I9 107 aa5.66□□□□□ -1.5
APOBEC3F-204ENST00000491387 TRGV11A0A075B6L2 103 aa5.65□□□□□ -1.5
APOBEC3F-204ENST00000491387 IGLV5-52A0A0A0MRZ9 124 aa5.65□□□□□ -1.5
APOBEC3F-204ENST00000491387 TRAV4A0A0B4J268 109 aa5.65□□□□□ -1.5
APOBEC3F-204ENST00000491387 IGHV3-38A0A0C4DH36 116 aa5.65□□□□□ -1.5
APOBEC3F-204ENST00000491387 A0A1W2PPV4 95 aa5.65□□□□□ -1.5
APOBEC3F-204ENST00000491387 RBFOX3A6NFN3 312 aa5.65□□□□□ -1.5
APOBEC3F-204ENST00000491387 KRTAP29-1A8MX34 341 aaPredicted RBP5.65□□□□□ -1.5
APOBEC3F-204ENST00000491387 IBA57-AS1B1ANH7 110 aa5.65□□□□□ -1.5
APOBEC3F-204ENST00000491387 C9JQL5 133 aa5.65□□□□□ -1.5
APOBEC3F-204ENST00000491387 IGLV2-11P01706 119 aa5.65□□□□□ -1.5
APOBEC3F-204ENST00000491387 ADCYAP1P18509 176 aa5.65□□□□□ -1.5
APOBEC3F-204ENST00000491387 CSN1S1P47710 185 aa5.65□□□□□ -1.5
APOBEC3F-204ENST00000491387 FGF8P55075 233 aaPredicted RBP5.65□□□□□ -1.5
APOBEC3F-204ENST00000491387 TAS2R45P59539 299 aa5.65□□□□□ -1.5
APOBEC3F-204ENST00000491387 ZNF506Q5JVG8 444 aa5.65□□□□□ -1.5
APOBEC3F-204ENST00000491387 LINC00479Q96M42 142 aa5.65□□□□□ -1.5
APOBEC3F-204ENST00000491387 CARHSP1Q9Y2V2 147 aaKnown RBP5.65□□□□□ -1.5
APOBEC3F-204ENST00000491387 FAT3Q8TDW7 4589 aa5.64□□□□□ -1.51
APOBEC3F-204ENST00000491387 TRAV34A0A0B4J273 112 aa5.64□□□□□ -1.51
APOBEC3F-204ENST00000491387 IFNA1P01562 189 aa5.64□□□□□ -1.51
APOBEC3F-204ENST00000491387 TCRAP04437 139 aa5.64□□□□□ -1.51
APOBEC3F-204ENST00000491387 GATA1P15976 413 aaPredicted RBP5.64□□□□□ -1.51
APOBEC3F-204ENST00000491387 PPT1P50897 306 aa5.64□□□□□ -1.51
APOBEC3F-204ENST00000491387 UBE2G2P60604 165 aa5.64□□□□□ -1.51
APOBEC3F-204ENST00000491387 FAM159AQ6UWV7 190 aa5.64□□□□□ -1.51
APOBEC3F-204ENST00000491387 PQLC2Q6ZP29 291 aa5.64□□□□□ -1.51
APOBEC3F-204ENST00000491387 Q6ZSA8 131 aa5.64□□□□□ -1.51
APOBEC3F-204ENST00000491387 SVBPQ8N300 66 aa5.64□□□□□ -1.51
APOBEC3F-204ENST00000491387 Q8N814 137 aa5.64□□□□□ -1.51
APOBEC3F-204ENST00000491387 SUN5Q8TC36 379 aa5.64□□□□□ -1.51
APOBEC3F-204ENST00000491387 IGHV3-73A0A0B4J1V6 119 aa5.63□□□□□ -1.51
APOBEC3F-204ENST00000491387 M0R2P5 195 aa5.63□□□□□ -1.51
APOBEC3F-204ENST00000491387 CIDEAO60543 219 aa5.63□□□□□ -1.51
APOBEC3F-204ENST00000491387 SCO1O75880 301 aa5.63□□□□□ -1.51
APOBEC3F-204ENST00000491387 SNAPINO95295 136 aa5.63□□□□□ -1.51
APOBEC3F-204ENST00000491387 BCL2P10415 239 aa5.63□□□□□ -1.51
APOBEC3F-204ENST00000491387 TAGLN2P37802 199 aaKnown RBP5.63□□□□□ -1.51
APOBEC3F-204ENST00000491387 SUMO1P63165 101 aaKnown RBP5.63□□□□□ -1.51
APOBEC3F-204ENST00000491387 LAGE3Q14657 143 aa5.63□□□□□ -1.51
APOBEC3F-204ENST00000491387 PRNTQ86SH4 94 aa5.63□□□□□ -1.51
APOBEC3F-204ENST00000491387 Q8N3U1 123 aa5.63□□□□□ -1.51
APOBEC3F-204ENST00000491387 ARL6IP6Q8N6S5 226 aa5.63□□□□□ -1.51
APOBEC3F-204ENST00000491387 OR4C5Q8NGB2 326 aa5.63□□□□□ -1.51
APOBEC3F-204ENST00000491387 CMTM2Q8TAZ6 248 aa5.63□□□□□ -1.51
APOBEC3F-204ENST00000491387 FAM30AQ9NZY2 134 aa5.63□□□□□ -1.51
APOBEC3F-204ENST00000491387 GNG13Q9P2W3 67 aa5.63□□□□□ -1.51
APOBEC3F-204ENST00000491387 Q9UF83 564 aa5.63□□□□□ -1.51
APOBEC3F-204ENST00000491387 PSG8Q9UQ74 426 aa5.63□□□□□ -1.51
APOBEC3F-204ENST00000491387 PGPEP1LA6NFU8 196 aa5.62□□□□□ -1.51
APOBEC3F-204ENST00000491387 J3QL48 77 aa5.62□□□□□ -1.51
APOBEC3F-204ENST00000491387 PSCAO43653 123 aa5.62□□□□□ -1.51
APOBEC3F-204ENST00000491387 GCGP01275 180 aa5.62□□□□□ -1.51
APOBEC3F-204ENST00000491387 PLA2G1BP04054 148 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms