RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 C9JQL5 133 aa10.06□□□□□ -0.8
SRGAP3-208ENST00000490348 SFTA3P0C7M3 94 aa10.06□□□□□ -0.8
SRGAP3-208ENST00000490348 ASIPP42127 132 aa10.06□□□□□ -0.8
SRGAP3-208ENST00000490348 OR5I1Q13606 314 aa10.06□□□□□ -0.8
SRGAP3-208ENST00000490348 SMIM12Q96EX1 92 aa10.06□□□□□ -0.8
SRGAP3-208ENST00000490348 ZNF479Q96JC4 524 aa10.06□□□□□ -0.8
SRGAP3-208ENST00000490348 IL36BQ9NZH7 164 aa10.06□□□□□ -0.8
SRGAP3-208ENST00000490348 TRAV26-1A0A087WT03 109 aa10.05□□□□□ -0.8
SRGAP3-208ENST00000490348 C19orf71A6NCJ1 209 aa10.05□□□□□ -0.8
SRGAP3-208ENST00000490348 C9JCJ5 164 aa10.05□□□□□ -0.8
SRGAP3-208ENST00000490348 H3BVH4 76 aa10.05□□□□□ -0.8
SRGAP3-208ENST00000490348 K7EN84 100 aa10.05□□□□□ -0.8
SRGAP3-208ENST00000490348 SRP19P09132 144 aaKnown RBP10.05□□□□□ -0.8
SRGAP3-208ENST00000490348 MGST1P10620 155 aaKnown RBP10.05□□□□□ -0.8
SRGAP3-208ENST00000490348 ZNF876PQ49A33 203 aa10.05□□□□□ -0.8
SRGAP3-208ENST00000490348 SCRT2Q9NQ03 307 aa10.05□□□□□ -0.8
SRGAP3-208ENST00000490348 NACAE9PAV3 2078 aa10.05□□□□□ -0.8
SRGAP3-208ENST00000490348 NDUFS6O75380 124 aaKnown RBP10.05□□□□□ -0.8
SRGAP3-208ENST00000490348 ARMS2P0C7Q2 107 aa10.05□□□□□ -0.8
SRGAP3-208ENST00000490348 S100A4P26447 101 aaKnown RBP10.05□□□□□ -0.8
SRGAP3-208ENST00000490348 CEBPGP53567 150 aa10.05□□□□□ -0.8
SRGAP3-208ENST00000490348 FHL2Q14192 279 aa10.05□□□□□ -0.8
SRGAP3-208ENST00000490348 OCC1Q8TAD7 63 aa10.05□□□□□ -0.8
SRGAP3-208ENST00000490348 PTH2Q96A98 100 aa10.05□□□□□ -0.8
SRGAP3-208ENST00000490348 VSIG2Q96IQ7 327 aa10.05□□□□□ -0.8
SRGAP3-208ENST00000490348 A0A0J9YY99 117 aa10.04□□□□□ -0.8
SRGAP3-208ENST00000490348 LY6G6CO95867 125 aa10.04□□□□□ -0.8
SRGAP3-208ENST00000490348 LGALS9CQ6DKI2 356 aa10.04□□□□□ -0.8
SRGAP3-208ENST00000490348 TRAV4A0A0B4J268 109 aa10.03□□□□□ -0.8
SRGAP3-208ENST00000490348 CFAP126Q5VTH2 177 aa10.03□□□□□ -0.8
SRGAP3-208ENST00000490348 DMRTA1Q5VZB9 504 aa10.03□□□□□ -0.8
SRGAP3-208ENST00000490348 FRAS1Q86XX4 4008 aa10.02□□□□□ -0.81
SRGAP3-208ENST00000490348 DNAH2Q9P225 4427 aa10.02□□□□□ -0.81
SRGAP3-208ENST00000490348 RS1O15537 224 aa10.01□□□□□ -0.81
SRGAP3-208ENST00000490348 CXCL1P09341 107 aa10.01□□□□□ -0.81
SRGAP3-208ENST00000490348 GZMBP10144 247 aa10.01□□□□□ -0.81
SRGAP3-208ENST00000490348 C15orf53Q8NAA6 179 aa10.01□□□□□ -0.81
SRGAP3-208ENST00000490348 OR4C5Q8NGB2 326 aa10.01□□□□□ -0.81
SRGAP3-208ENST00000490348 RNASE7Q9H1E1 156 aaKnown RBP10.01□□□□□ -0.81
SRGAP3-208ENST00000490348 JPT2Q9H910 190 aa10.01□□□□□ -0.81
SRGAP3-208ENST00000490348 NUDT3O95989 172 aa10.01□□□□□ -0.81
SRGAP3-208ENST00000490348 CRYBA4P53673 196 aa10.01□□□□□ -0.81
SRGAP3-208ENST00000490348 NUDT10Q8NFP7 164 aa10.01□□□□□ -0.81
SRGAP3-208ENST00000490348 NUDT11Q96G61 164 aa10.01□□□□□ -0.81
SRGAP3-208ENST00000490348 SMIM7Q9BQ49 75 aa10.01□□□□□ -0.81
SRGAP3-208ENST00000490348 SSBP4Q9BWG4 385 aaPredicted RBP10.01□□□□□ -0.81
SRGAP3-208ENST00000490348 HHLA3Q9XRX5 114 aa10.01□□□□□ -0.81
SRGAP3-208ENST00000490348 H3BNG1 76 aa10□□□□□ -0.81
SRGAP3-208ENST00000490348 SNAI2O43623 268 aa10□□□□□ -0.81
SRGAP3-208ENST00000490348 MED14OSP0DP75 135 aa10□□□□□ -0.81
SRGAP3-208ENST00000490348 PIK3CD-AS1Q5SR53 167 aa10□□□□□ -0.81
SRGAP3-208ENST00000490348 OR2D3Q8NGH3 330 aa10□□□□□ -0.81
SRGAP3-208ENST00000490348 OR10AG1Q8NH19 301 aa10□□□□□ -0.81
SRGAP3-208ENST00000490348 DAZAP1Q96EP5 407 aaKnown RBP10□□□□□ -0.81
SRGAP3-208ENST00000490348 SAMD10Q9BYL1 202 aa10□□□□□ -0.81
SRGAP3-208ENST00000490348 PRO0255Q9UI72 69 aa10□□□□□ -0.81
SRGAP3-208ENST00000490348 PHLDA3Q9Y5J5 127 aa10□□□□□ -0.81
SRGAP3-208ENST00000490348 IGHV3-73A0A0B4J1V6 119 aa9.99□□□□□ -0.81
SRGAP3-208ENST00000490348 TRGV4A0A0C4DH28 118 aa9.99□□□□□ -0.81
SRGAP3-208ENST00000490348 MUC21A0A0G2JKD1 596 aa9.99□□□□□ -0.81
SRGAP3-208ENST00000490348 MUC21A0A140T8X8 626 aa9.99□□□□□ -0.81
SRGAP3-208ENST00000490348 P01737 135 aa9.99□□□□□ -0.81
SRGAP3-208ENST00000490348 UFSP1Q6NVU6 142 aa9.99□□□□□ -0.81
SRGAP3-208ENST00000490348 LINC01551Q86U37 167 aa9.99□□□□□ -0.81
SRGAP3-208ENST00000490348 A0A096LPF7 62 aa9.98□□□□□ -0.81
SRGAP3-208ENST00000490348 ZNF727A8MUV8 499 aa9.98□□□□□ -0.81
SRGAP3-208ENST00000490348 M0R381 172 aa9.98□□□□□ -0.81
SRGAP3-208ENST00000490348 PAX4O43316 350 aa9.98□□□□□ -0.81
SRGAP3-208ENST00000490348 NXPH4O95158 308 aa9.98□□□□□ -0.81
SRGAP3-208ENST00000490348 OR5AL1P0C617 328 aa9.98□□□□□ -0.81
SRGAP3-208ENST00000490348 IGLC6P0CF74 106 aa9.98□□□□□ -0.81
SRGAP3-208ENST00000490348 P0DMU3 169 aa9.98□□□□□ -0.81
SRGAP3-208ENST00000490348 FAM231AP0DMU4 169 aa9.98□□□□□ -0.81
SRGAP3-208ENST00000490348 FAM231CP0DMU5 169 aa9.98□□□□□ -0.81
SRGAP3-208ENST00000490348 GATA1P15976 413 aaPredicted RBP9.98□□□□□ -0.81
SRGAP3-208ENST00000490348 PEA15Q15121 130 aa9.98□□□□□ -0.81
SRGAP3-208ENST00000490348 Q6ZSN1 163 aa9.98□□□□□ -0.81
SRGAP3-208ENST00000490348 BIN3Q9NQY0 253 aa9.98□□□□□ -0.81
SRGAP3-208ENST00000490348 LY96Q9Y6Y9 160 aa9.98□□□□□ -0.81
SRGAP3-208ENST00000490348 SMDT1Q9H4I9 107 aa9.97□□□□□ -0.81
SRGAP3-208ENST00000490348 TMA7Q9Y2S6 64 aaKnown RBP9.97□□□□□ -0.81
SRGAP3-208ENST00000490348 DNAH10Q8IVF4 4471 aa9.97□□□□□ -0.81
SRGAP3-208ENST00000490348 LOC100131303A0A0U1RQF7 123 aa9.97□□□□□ -0.81
SRGAP3-208ENST00000490348 A8MWV9 139 aa9.97□□□□□ -0.81
SRGAP3-208ENST00000490348 SLAQ13239 276 aa9.97□□□□□ -0.81
SRGAP3-208ENST00000490348 ZFP82Q8N141 532 aa9.97□□□□□ -0.81
SRGAP3-208ENST00000490348 SYT8Q8NBV8 401 aa9.97□□□□□ -0.81
SRGAP3-208ENST00000490348 SFRP2Q96HF1 295 aa9.97□□□□□ -0.81
SRGAP3-208ENST00000490348 RPP21Q9H633 154 aaKnown RBP9.97□□□□□ -0.81
SRGAP3-208ENST00000490348 CRYGDP07320 174 aa9.96□□□□□ -0.82
SRGAP3-208ENST00000490348 RPS20P60866 119 aaKnown RBP9.96□□□□□ -0.82
SRGAP3-208ENST00000490348 FAM231DQ6ZW35 169 aa9.96□□□□□ -0.82
SRGAP3-208ENST00000490348 SLC25A29Q8N8R3 303 aa9.96□□□□□ -0.82
SRGAP3-208ENST00000490348 LINC00588Q9Y4M8 146 aa9.96□□□□□ -0.82
SRGAP3-208ENST00000490348 A0A087WWL8 130 aa9.95□□□□□ -0.82
SRGAP3-208ENST00000490348 K7EQD1 137 aa9.95□□□□□ -0.82
SRGAP3-208ENST00000490348 ESRGQ1W209 222 aa9.95□□□□□ -0.82
SRGAP3-208ENST00000490348 FAM74A3Q4VXF1 159 aa9.95□□□□□ -0.82
SRGAP3-208ENST00000490348 ZFP2Q6ZN57 461 aa9.95□□□□□ -0.82
SRGAP3-208ENST00000490348 FER1L6-AS1Q8NA97 138 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms