RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 C19orf71A6NCJ1 209 aa12.99□□□□□ -0.33
PTCD3-217ENST00000488801 PGPEP1LA6NFU8 196 aa12.99□□□□□ -0.33
PTCD3-217ENST00000488801 H3BVH4 76 aa12.99□□□□□ -0.33
PTCD3-217ENST00000488801 P0DMU3 169 aa12.99□□□□□ -0.33
PTCD3-217ENST00000488801 FAM231AP0DMU4 169 aa12.99□□□□□ -0.33
PTCD3-217ENST00000488801 FAM231CP0DMU5 169 aa12.99□□□□□ -0.33
PTCD3-217ENST00000488801 OR5I1Q13606 314 aa12.99□□□□□ -0.33
PTCD3-217ENST00000488801 ZNF876PQ49A33 203 aa12.99□□□□□ -0.33
PTCD3-217ENST00000488801 PARLQ9H300 379 aa12.99□□□□□ -0.33
PTCD3-217ENST00000488801 RS1O15537 224 aa12.98□□□□□ -0.33
PTCD3-217ENST00000488801 IGHV3-53P01767 116 aa12.98□□□□□ -0.33
PTCD3-217ENST00000488801 SFTA3P0C7M3 94 aa12.98□□□□□ -0.33
PTCD3-217ENST00000488801 MED14OSP0DP75 135 aa12.98□□□□□ -0.33
PTCD3-217ENST00000488801 RPL19P84098 196 aaKnown RBP12.98□□□□□ -0.33
PTCD3-217ENST00000488801 PCNPQ8WW12 178 aaKnown RBP12.98□□□□□ -0.33
PTCD3-217ENST00000488801 CRYBA4P53673 196 aa12.97□□□□□ -0.33
PTCD3-217ENST00000488801 CFAP126Q5VTH2 177 aa12.97□□□□□ -0.33
PTCD3-217ENST00000488801 PRR27Q6MZM9 219 aa12.97□□□□□ -0.33
PTCD3-217ENST00000488801 PRO0255Q9UI72 69 aa12.97□□□□□ -0.33
PTCD3-217ENST00000488801 A0A0J9YY99 117 aa12.96□□□□□ -0.33
PTCD3-217ENST00000488801 GRIFINA4D1Z8 144 aa12.96□□□□□ -0.33
PTCD3-217ENST00000488801 NXPH4O95158 308 aa12.96□□□□□ -0.33
PTCD3-217ENST00000488801 ARMS2P0C7Q2 107 aa12.96□□□□□ -0.33
PTCD3-217ENST00000488801 S100A4P26447 101 aaKnown RBP12.96□□□□□ -0.33
PTCD3-217ENST00000488801 RNF212Q495C1 297 aa12.96□□□□□ -0.33
PTCD3-217ENST00000488801 TMSB15BA0A087X1C1 80 aa12.95□□□□□ -0.34
PTCD3-217ENST00000488801 K7EN84 100 aa12.95□□□□□ -0.34
PTCD3-217ENST00000488801 SNAI2O43623 268 aa12.95□□□□□ -0.34
PTCD3-217ENST00000488801 SRP19P09132 144 aaKnown RBP12.95□□□□□ -0.34
PTCD3-217ENST00000488801 SLAQ13239 276 aa12.95□□□□□ -0.34
PTCD3-217ENST00000488801 OR4C5Q8NGB2 326 aa12.95□□□□□ -0.34
PTCD3-217ENST00000488801 SSBP4Q9BWG4 385 aaPredicted RBP12.95□□□□□ -0.34
PTCD3-217ENST00000488801 FRAS1Q86XX4 4008 aa12.94□□□□□ -0.34
PTCD3-217ENST00000488801 A0A096LPF7 62 aa12.94□□□□□ -0.34
PTCD3-217ENST00000488801 CIDEAO60543 219 aa12.94□□□□□ -0.34
PTCD3-217ENST00000488801 NUDT3O95989 172 aa12.94□□□□□ -0.34
PTCD3-217ENST00000488801 GATA1P15976 413 aaPredicted RBP12.94□□□□□ -0.34
PTCD3-217ENST00000488801 UFSP1Q6NVU6 142 aa12.94□□□□□ -0.34
PTCD3-217ENST00000488801 EIF5A2Q9GZV4 153 aaKnown RBP12.94□□□□□ -0.34
PTCD3-217ENST00000488801 MGST1P10620 155 aaKnown RBP12.93□□□□□ -0.34
PTCD3-217ENST00000488801 DMRTA1Q5VZB9 504 aa12.93□□□□□ -0.34
PTCD3-217ENST00000488801 BIN3Q9NQY0 253 aa12.93□□□□□ -0.34
PTCD3-217ENST00000488801 HHLA3Q9XRX5 114 aa12.93□□□□□ -0.34
PTCD3-217ENST00000488801 LY96Q9Y6Y9 160 aa12.93□□□□□ -0.34
PTCD3-217ENST00000488801 TRGV4A0A0C4DH28 118 aa12.92□□□□□ -0.34
PTCD3-217ENST00000488801 A8MWV9 139 aa12.92□□□□□ -0.34
PTCD3-217ENST00000488801 PAX4O43316 350 aa12.92□□□□□ -0.34
PTCD3-217ENST00000488801 OR5AL1P0C617 328 aa12.92□□□□□ -0.34
PTCD3-217ENST00000488801 IGLC6P0CF74 106 aa12.92□□□□□ -0.34
PTCD3-217ENST00000488801 FAM3BP58499 235 aaPredicted RBP12.92□□□□□ -0.34
PTCD3-217ENST00000488801 ZFP2Q6ZN57 461 aa12.92□□□□□ -0.34
PTCD3-217ENST00000488801 OCC1Q8TAD7 63 aa12.92□□□□□ -0.34
PTCD3-217ENST00000488801 DNAH10Q8IVF4 4471 aa12.91□□□□□ -0.34
PTCD3-217ENST00000488801 PHLDA3Q9Y5J5 127 aa12.91□□□□□ -0.34
PTCD3-217ENST00000488801 C9JQL5 133 aa12.9□□□□□ -0.34
PTCD3-217ENST00000488801 ZFP82Q8N141 532 aa12.9□□□□□ -0.34
PTCD3-217ENST00000488801 SYT8Q8NBV8 401 aa12.9□□□□□ -0.34
PTCD3-217ENST00000488801 OR10AG1Q8NH19 301 aa12.9□□□□□ -0.34
PTCD3-217ENST00000488801 SMDT1Q9H4I9 107 aa12.9□□□□□ -0.34
PTCD3-217ENST00000488801 JPT2Q9H910 190 aa12.9□□□□□ -0.34
PTCD3-217ENST00000488801 LINC00588Q9Y4M8 146 aa12.9□□□□□ -0.34
PTCD3-217ENST00000488801 ICOSQ9Y6W8 199 aa12.9□□□□□ -0.34
PTCD3-217ENST00000488801 P01737 135 aa12.89□□□□□ -0.35
PTCD3-217ENST00000488801 RPS20P60866 119 aaKnown RBP12.89□□□□□ -0.35
PTCD3-217ENST00000488801 SRSF3P84103 164 aaKnown RBP12.89□□□□□ -0.35
PTCD3-217ENST00000488801 IFITM2Q01629 132 aa12.89□□□□□ -0.35
PTCD3-217ENST00000488801 NUDT10Q8NFP7 164 aa12.89□□□□□ -0.35
PTCD3-217ENST00000488801 OR2D3Q8NGH3 330 aa12.89□□□□□ -0.35
PTCD3-217ENST00000488801 NUDT11Q96G61 164 aa12.89□□□□□ -0.35
PTCD3-217ENST00000488801 SFRP2Q96HF1 295 aa12.89□□□□□ -0.35
PTCD3-217ENST00000488801 SMIM7Q9BQ49 75 aa12.89□□□□□ -0.35
PTCD3-217ENST00000488801 TRBV6-4A0A1B0GX49 114 aa12.88□□□□□ -0.35
PTCD3-217ENST00000488801 K7EQD1 137 aa12.88□□□□□ -0.35
PTCD3-217ENST00000488801 ESRGQ1W209 222 aa12.88□□□□□ -0.35
PTCD3-217ENST00000488801 FAM231DQ6ZW35 169 aa12.88□□□□□ -0.35
PTCD3-217ENST00000488801 UBE2DNLQ8IWF7 75 aa12.88□□□□□ -0.35
PTCD3-217ENST00000488801 SLC25A29Q8N8R3 303 aa12.88□□□□□ -0.35
PTCD3-217ENST00000488801 ZNRF2Q8NHG8 242 aa12.88□□□□□ -0.35
PTCD3-217ENST00000488801 DAZAP1Q96EP5 407 aaKnown RBP12.88□□□□□ -0.35
PTCD3-217ENST00000488801 UPK3BQ9BT76 320 aa12.88□□□□□ -0.35
PTCD3-217ENST00000488801 SAMD10Q9BYL1 202 aa12.88□□□□□ -0.35
PTCD3-217ENST00000488801 CRYGDP07320 174 aa12.87□□□□□ -0.35
PTCD3-217ENST00000488801 GZMBP10144 247 aa12.87□□□□□ -0.35
PTCD3-217ENST00000488801 CCL18P55774 89 aa12.87□□□□□ -0.35
PTCD3-217ENST00000488801 MRPL23Q16540 153 aaKnown RBP12.87□□□□□ -0.35
PTCD3-217ENST00000488801 LINC01551Q86U37 167 aa12.87□□□□□ -0.35
PTCD3-217ENST00000488801 RNASE7Q9H1E1 156 aaKnown RBP12.87□□□□□ -0.35
PTCD3-217ENST00000488801 DNAH2Q9P225 4427 aa12.87□□□□□ -0.35
PTCD3-217ENST00000488801 ZNF727A8MUV8 499 aa12.86□□□□□ -0.35
PTCD3-217ENST00000488801 M0R381 172 aa12.86□□□□□ -0.35
PTCD3-217ENST00000488801 RHODO00212 210 aa12.86□□□□□ -0.35
PTCD3-217ENST00000488801 LINC00694P0DN24 101 aa12.86□□□□□ -0.35
PTCD3-217ENST00000488801 GYPEP15421 78 aa12.86□□□□□ -0.35
PTCD3-217ENST00000488801 Q6ZSN1 163 aa12.86□□□□□ -0.35
PTCD3-217ENST00000488801 MRPS16Q9Y3D3 137 aaKnown RBP12.86□□□□□ -0.35
PTCD3-217ENST00000488801 IGHV3-73A0A0B4J1V6 119 aa12.85□□□□□ -0.35
PTCD3-217ENST00000488801 LOC100131303A0A0U1RQF7 123 aa12.85□□□□□ -0.35
PTCD3-217ENST00000488801 CTRLP40313 264 aa12.85□□□□□ -0.35
PTCD3-217ENST00000488801 CEBPGP53567 150 aa12.85□□□□□ -0.35
PTCD3-217ENST00000488801 RHOHQ15669 191 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms