RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 CEMP1Q6PRD7 247 aaPredicted RBP7.57□□□□□ -1.2
TOP3B-216ENST00000487485 ZNF575Q86XF7 245 aa7.57□□□□□ -1.2
TOP3B-216ENST00000487485 LINC00612Q8N6U2 182 aa7.57□□□□□ -1.2
TOP3B-216ENST00000487485 MRPL16Q9NX20 251 aaKnown RBP7.57□□□□□ -1.2
TOP3B-216ENST00000487485 LY96Q9Y6Y9 160 aa7.57□□□□□ -1.2
TOP3B-216ENST00000487485 DEFB131BA0A096LNP1 70 aa7.56□□□□□ -1.2
TOP3B-216ENST00000487485 TRAV10A0A0B4J240 114 aa7.56□□□□□ -1.2
TOP3B-216ENST00000487485 M0R2P5 195 aa7.56□□□□□ -1.2
TOP3B-216ENST00000487485 P01737 135 aa7.56□□□□□ -1.2
TOP3B-216ENST00000487485 TMEM241Q24JQ0 296 aa7.56□□□□□ -1.2
TOP3B-216ENST00000487485 SOHLH1Q5JUK2 328 aa7.56□□□□□ -1.2
TOP3B-216ENST00000487485 NUDT10Q8NFP7 164 aa7.56□□□□□ -1.2
TOP3B-216ENST00000487485 NUDT11Q96G61 164 aa7.56□□□□□ -1.2
TOP3B-216ENST00000487485 C9orf85Q96MD7 179 aa7.56□□□□□ -1.2
TOP3B-216ENST00000487485 RNASE7Q9H1E1 156 aaKnown RBP7.56□□□□□ -1.2
TOP3B-216ENST00000487485 TRGV2A0A075B6R0 118 aa7.55□□□□□ -1.2
TOP3B-216ENST00000487485 NUPR2A6NF83 97 aa7.55□□□□□ -1.2
TOP3B-216ENST00000487485 ARMS2P0C7Q2 107 aa7.55□□□□□ -1.2
TOP3B-216ENST00000487485 HTN3P15516 51 aa7.55□□□□□ -1.2
TOP3B-216ENST00000487485 LINC01551Q86U37 167 aa7.55□□□□□ -1.2
TOP3B-216ENST00000487485 OR2D3Q8NGH3 330 aa7.55□□□□□ -1.2
TOP3B-216ENST00000487485 RASL10AQ92737 203 aa7.55□□□□□ -1.2
TOP3B-216ENST00000487485 IL36BQ9NZH7 164 aa7.55□□□□□ -1.2
TOP3B-216ENST00000487485 NAT8Q9UHE5 227 aa7.55□□□□□ -1.2
TOP3B-216ENST00000487485 LINC00862A6NCI5 91 aa7.54□□□□□ -1.2
TOP3B-216ENST00000487485 H3BVH4 76 aa7.54□□□□□ -1.2
TOP3B-216ENST00000487485 ATP5G1P05496 136 aa7.54□□□□□ -1.2
TOP3B-216ENST00000487485 CXCL1P09341 107 aa7.54□□□□□ -1.2
TOP3B-216ENST00000487485 SFTA3P0C7M3 94 aa7.54□□□□□ -1.2
TOP3B-216ENST00000487485 ERVFC1-1P60608 527 aa7.54□□□□□ -1.2
TOP3B-216ENST00000487485 RPS20P60866 119 aaKnown RBP7.54□□□□□ -1.2
TOP3B-216ENST00000487485 RPL23P62829 140 aaKnown RBP7.54□□□□□ -1.2
TOP3B-216ENST00000487485 UQCC3Q6UW78 93 aa7.54□□□□□ -1.2
TOP3B-216ENST00000487485 C18orf15Q96N68 181 aa7.54□□□□□ -1.2
TOP3B-216ENST00000487485 PKHD1P08F94 4074 aa7.53□□□□□ -1.2
TOP3B-216ENST00000487485 GATCO43716 136 aaKnown RBP7.53□□□□□ -1.2
TOP3B-216ENST00000487485 GZMBP10144 247 aa7.53□□□□□ -1.2
TOP3B-216ENST00000487485 ZNF876PQ49A33 203 aa7.53□□□□□ -1.2
TOP3B-216ENST00000487485 FAM231DQ6ZW35 169 aa7.53□□□□□ -1.2
TOP3B-216ENST00000487485 COMMD7Q86VX2 200 aa7.53□□□□□ -1.2
TOP3B-216ENST00000487485 PTH2Q96A98 100 aa7.53□□□□□ -1.2
TOP3B-216ENST00000487485 RPP21Q9H633 154 aaKnown RBP7.53□□□□□ -1.2
TOP3B-216ENST00000487485 KLK5Q9Y337 293 aaPredicted RBP7.53□□□□□ -1.2
TOP3B-216ENST00000487485 PHLDA3Q9Y5J5 127 aa7.53□□□□□ -1.2
TOP3B-216ENST00000487485 DNAH17Q9UFH2 4485 aa7.53□□□□□ -1.2
TOP3B-216ENST00000487485 XKRY2A2RUG3 117 aa7.52□□□□□ -1.21
TOP3B-216ENST00000487485 F5H768 121 aa7.52□□□□□ -1.21
TOP3B-216ENST00000487485 IGHV3-53P01767 116 aa7.52□□□□□ -1.21
TOP3B-216ENST00000487485 MED14OSP0DP75 135 aa7.52□□□□□ -1.21
TOP3B-216ENST00000487485 ADIRFQ15847 76 aa7.52□□□□□ -1.21
TOP3B-216ENST00000487485 ISOC2Q96AB3 205 aa7.52□□□□□ -1.21
TOP3B-216ENST00000487485 SSBP4Q9BWG4 385 aaPredicted RBP7.52□□□□□ -1.21
TOP3B-216ENST00000487485 SCRT2Q9NQ03 307 aa7.52□□□□□ -1.21
TOP3B-216ENST00000487485 DYNC1H1Q14204 4646 aaKnown RBP7.52□□□□□ -1.21
TOP3B-216ENST00000487485 NACAE9PAV3 2078 aa7.51□□□□□ -1.21
TOP3B-216ENST00000487485 TRAV4A0A0B4J268 109 aa7.51□□□□□ -1.21
TOP3B-216ENST00000487485 IGLL5B9A064 214 aa7.51□□□□□ -1.21
TOP3B-216ENST00000487485 SNAI2O43623 268 aa7.51□□□□□ -1.21
TOP3B-216ENST00000487485 OR5AL1P0C617 328 aa7.51□□□□□ -1.21
TOP3B-216ENST00000487485 HOXA5P20719 270 aa7.51□□□□□ -1.21
TOP3B-216ENST00000487485 DMRTA1Q5VZB9 504 aa7.51□□□□□ -1.21
TOP3B-216ENST00000487485 LGALS9CQ6DKI2 356 aa7.51□□□□□ -1.21
TOP3B-216ENST00000487485 POM121L12Q8N7R1 296 aa7.51□□□□□ -1.21
TOP3B-216ENST00000487485 SYT8Q8NBV8 401 aa7.51□□□□□ -1.21
TOP3B-216ENST00000487485 OR4C5Q8NGB2 326 aa7.51□□□□□ -1.21
TOP3B-216ENST00000487485 ZNF479Q96JC4 524 aa7.51□□□□□ -1.21
TOP3B-216ENST00000487485 NDUFAF3Q9BU61 184 aa7.51□□□□□ -1.21
TOP3B-216ENST00000487485 OSTCQ9NRP0 149 aa7.51□□□□□ -1.21
TOP3B-216ENST00000487485 IGHV4-4A0A075B6R2 117 aa7.5□□□□□ -1.21
TOP3B-216ENST00000487485 MUC21A0A0G2JKD1 596 aa7.5□□□□□ -1.21
TOP3B-216ENST00000487485 MUC21A0A140T8X8 626 aa7.5□□□□□ -1.21
TOP3B-216ENST00000487485 TMEM218A2RU14 115 aa7.5□□□□□ -1.21
TOP3B-216ENST00000487485 A8MWL6 223 aa7.5□□□□□ -1.21
TOP3B-216ENST00000487485 M0R381 172 aa7.5□□□□□ -1.21
TOP3B-216ENST00000487485 IGLC6P0CF74 106 aa7.5□□□□□ -1.21
TOP3B-216ENST00000487485 SSTP61278 116 aa7.5□□□□□ -1.21
TOP3B-216ENST00000487485 PIK3CD-AS1Q5SR53 167 aa7.5□□□□□ -1.21
TOP3B-216ENST00000487485 ZFP82Q8N141 532 aa7.5□□□□□ -1.21
TOP3B-216ENST00000487485 C15orf54Q8N8G6 183 aa7.5□□□□□ -1.21
TOP3B-216ENST00000487485 FER1L6-AS1Q8NA97 138 aa7.5□□□□□ -1.21
TOP3B-216ENST00000487485 OR10AG1Q8NH19 301 aa7.5□□□□□ -1.21
TOP3B-216ENST00000487485 SFRP2Q96HF1 295 aa7.5□□□□□ -1.21
TOP3B-216ENST00000487485 TPPP3Q9BW30 176 aa7.5□□□□□ -1.21
TOP3B-216ENST00000487485 FAT2Q9NYQ8 4349 aa7.5□□□□□ -1.21
TOP3B-216ENST00000487485 DNAH2Q9P225 4427 aa7.5□□□□□ -1.21
TOP3B-216ENST00000487485 TRGV4A0A0C4DH28 118 aa7.49□□□□□ -1.21
TOP3B-216ENST00000487485 A0A1W2PPQ1 181 aa7.49□□□□□ -1.21
TOP3B-216ENST00000487485 A8MWV9 139 aa7.49□□□□□ -1.21
TOP3B-216ENST00000487485 F8W036 122 aa7.49□□□□□ -1.21
TOP3B-216ENST00000487485 RS1O15537 224 aa7.49□□□□□ -1.21
TOP3B-216ENST00000487485 FHL2Q14192 279 aa7.49□□□□□ -1.21
TOP3B-216ENST00000487485 CT83Q5H943 113 aa7.49□□□□□ -1.21
TOP3B-216ENST00000487485 SPANXN1Q5VSR9 72 aa7.49□□□□□ -1.21
TOP3B-216ENST00000487485 CFAP126Q5VTH2 177 aa7.49□□□□□ -1.21
TOP3B-216ENST00000487485 TMEM88Q6PEY1 159 aa7.49□□□□□ -1.21
TOP3B-216ENST00000487485 LYZL1Q6UWQ5 148 aa7.49□□□□□ -1.21
TOP3B-216ENST00000487485 OR10G8Q8NGN5 311 aa7.49□□□□□ -1.21
TOP3B-216ENST00000487485 FAM210BQ96KR6 192 aa7.49□□□□□ -1.21
TOP3B-216ENST00000487485 JPT2Q9H910 190 aa7.49□□□□□ -1.21
TOP3B-216ENST00000487485 DNAH11Q96DT5 4516 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms