RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 MSRB1Q9NZV6 116 aa8.58□□□□□ -1.04
PRKCB-207ENST00000486868 FN1P02751 2386 aaKnown RBP8.57□□□□□ -1.04
PRKCB-207ENST00000486868 LINC01546A6NGU7 62 aa8.57□□□□□ -1.04
PRKCB-207ENST00000486868 M0R2Z0 102 aa8.57□□□□□ -1.04
PRKCB-207ENST00000486868 PPP1R17O96001 155 aa8.57□□□□□ -1.04
PRKCB-207ENST00000486868 PF4P02776 101 aa8.57□□□□□ -1.04
PRKCB-207ENST00000486868 CD7P09564 240 aa8.57□□□□□ -1.04
PRKCB-207ENST00000486868 TRPT1Q86TN4 253 aaKnown RBP8.57□□□□□ -1.04
PRKCB-207ENST00000486868 AP1S3Q96PC3 154 aa8.57□□□□□ -1.04
PRKCB-207ENST00000486868 DPH3P1Q9H4G8 78 aa8.57□□□□□ -1.04
PRKCB-207ENST00000486868 MUC21A0A0G2JKD1 596 aa8.56□□□□□ -1.04
PRKCB-207ENST00000486868 MUC21A0A140T8X8 626 aa8.56□□□□□ -1.04
PRKCB-207ENST00000486868 RBMY1BA6NDE4 496 aaKnown RBP8.56□□□□□ -1.04
PRKCB-207ENST00000486868 RBMY1EA6NEQ0 496 aaKnown RBP8.56□□□□□ -1.04
PRKCB-207ENST00000486868 M0R381 172 aa8.56□□□□□ -1.04
PRKCB-207ENST00000486868 RBMY1DP0C7P1 496 aaKnown RBP8.56□□□□□ -1.04
PRKCB-207ENST00000486868 EVI2AP22794 236 aa8.56□□□□□ -1.04
PRKCB-207ENST00000486868 NUTF2P61970 127 aaKnown RBP8.56□□□□□ -1.04
PRKCB-207ENST00000486868 S100A12P80511 92 aa8.56□□□□□ -1.04
PRKCB-207ENST00000486868 HIST2H2BDQ6DRA6 164 aa8.56□□□□□ -1.04
PRKCB-207ENST00000486868 STHQ8IWL8 128 aa8.56□□□□□ -1.04
PRKCB-207ENST00000486868 SYT8Q8NBV8 401 aa8.56□□□□□ -1.04
PRKCB-207ENST00000486868 NDUFAF3Q9BU61 184 aa8.56□□□□□ -1.04
PRKCB-207ENST00000486868 NXT2Q9NPJ8 142 aaKnown RBP8.56□□□□□ -1.04
PRKCB-207ENST00000486868 AP5S1Q9NUS5 200 aa8.56□□□□□ -1.04
PRKCB-207ENST00000486868 TRAV12-2A0A075B6T6 113 aa8.55□□□□□ -1.04
PRKCB-207ENST00000486868 INSP01308 110 aa8.55□□□□□ -1.04
PRKCB-207ENST00000486868 IGKV3-20P01619 116 aa8.55□□□□□ -1.04
PRKCB-207ENST00000486868 C9orf66Q5T8R8 295 aa8.55□□□□□ -1.04
PRKCB-207ENST00000486868 RNASEKQ6P5S7 137 aaKnown RBP8.55□□□□□ -1.04
PRKCB-207ENST00000486868 Q6ZWC4 215 aa8.55□□□□□ -1.04
PRKCB-207ENST00000486868 FA2HQ7L5A8 372 aa8.55□□□□□ -1.04
PRKCB-207ENST00000486868 Q8N1Y9 231 aa8.55□□□□□ -1.04
PRKCB-207ENST00000486868 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.55□□□□□ -1.04
PRKCB-207ENST00000486868 PRSS3P2Q8NHM4 247 aa8.55□□□□□ -1.04
PRKCB-207ENST00000486868 MCRIP2Q9BUT9 160 aaKnown RBP8.55□□□□□ -1.04
PRKCB-207ENST00000486868 MAP1LC3AQ9H492 121 aa8.55□□□□□ -1.04
PRKCB-207ENST00000486868 NIT2Q9NQR4 276 aa8.55□□□□□ -1.04
PRKCB-207ENST00000486868 C19orf73Q9NVV2 129 aa8.55□□□□□ -1.04
PRKCB-207ENST00000486868 BAHCC1Q9P281 2608 aa8.54□□□□□ -1.04
PRKCB-207ENST00000486868 TNFRSF6BO95407 300 aa8.54□□□□□ -1.04
PRKCB-207ENST00000486868 MORN3Q6PF18 240 aaPredicted RBP8.54□□□□□ -1.04
PRKCB-207ENST00000486868 C20orf78Q9BR46 151 aa8.54□□□□□ -1.04
PRKCB-207ENST00000486868 KIF25-AS1Q9Y6Z4 181 aa8.54□□□□□ -1.04
PRKCB-207ENST00000486868 HIVEP1P15822 2718 aa8.53□□□□□ -1.04
PRKCB-207ENST00000486868 K7EMI3 77 aa8.53□□□□□ -1.04
PRKCB-207ENST00000486868 NPYP01303 97 aa8.53□□□□□ -1.04
PRKCB-207ENST00000486868 RPL32P62910 135 aaKnown RBP8.53□□□□□ -1.04
PRKCB-207ENST00000486868 WFDC9Q8NEX5 89 aa8.53□□□□□ -1.04
PRKCB-207ENST00000486868 SPXQ9BT56 116 aa8.53□□□□□ -1.04
PRKCB-207ENST00000486868 IGHV1-24A0A0C4DH33 117 aa8.52□□□□□ -1.05
PRKCB-207ENST00000486868 RBMY1A1P0DJD3 496 aaKnown RBP8.52□□□□□ -1.05
PRKCB-207ENST00000486868 RBMY1CP0DJD4 496 aa8.52□□□□□ -1.05
PRKCB-207ENST00000486868 SMIM17P0DL12 118 aa8.52□□□□□ -1.05
PRKCB-207ENST00000486868 LINC00315P59091 139 aa8.52□□□□□ -1.05
PRKCB-207ENST00000486868 SSTP61278 116 aa8.52□□□□□ -1.05
PRKCB-207ENST00000486868 RBMY1FQ15415 496 aaKnown RBP8.52□□□□□ -1.05
PRKCB-207ENST00000486868 Q8N8P6 123 aa8.52□□□□□ -1.05
PRKCB-207ENST00000486868 NRACQ8N912 160 aa8.52□□□□□ -1.05
PRKCB-207ENST00000486868 C1QTNF4Q9BXJ3 329 aa8.52□□□□□ -1.05
PRKCB-207ENST00000486868 HSPB8Q9UJY1 196 aa8.52□□□□□ -1.05
PRKCB-207ENST00000486868 NSD1Q96L73 2696 aaPredicted RBP8.51□□□□□ -1.05
PRKCB-207ENST00000486868 CBY3A6NI87 242 aa8.51□□□□□ -1.05
PRKCB-207ENST00000486868 WIPF1O43516 503 aa8.51□□□□□ -1.05
PRKCB-207ENST00000486868 IFI27P40305 119 aaPredicted RBP8.51□□□□□ -1.05
PRKCB-207ENST00000486868 ZNF415Q09FC8 603 aa8.51□□□□□ -1.05
PRKCB-207ENST00000486868 ZNF124Q15973 351 aa8.51□□□□□ -1.05
PRKCB-207ENST00000486868 FAM19A2Q8N3H0 131 aa8.51□□□□□ -1.05
PRKCB-207ENST00000486868 EDA2RQ9HAV5 297 aa8.51□□□□□ -1.05
PRKCB-207ENST00000486868 MDFICQ9P1T7 246 aa8.51□□□□□ -1.05
PRKCB-207ENST00000486868 TIMM8BQ9Y5J9 83 aaPredicted RBP8.51□□□□□ -1.05
PRKCB-207ENST00000486868 C2CD3Q4AC94 2353 aa8.51□□□□□ -1.05
PRKCB-207ENST00000486868 IGLV2-18A0A075B6J9 118 aa8.5□□□□□ -1.05
PRKCB-207ENST00000486868 SMKR1H3BMG3 65 aa8.5□□□□□ -1.05
PRKCB-207ENST00000486868 M0R2P5 195 aa8.5□□□□□ -1.05
PRKCB-207ENST00000486868 LEPROTL1O95214 131 aa8.5□□□□□ -1.05
PRKCB-207ENST00000486868 SCGB1D1O95968 90 aa8.5□□□□□ -1.05
PRKCB-207ENST00000486868 C3orf79P0CE67 100 aa8.5□□□□□ -1.05
PRKCB-207ENST00000486868 BTF3P20290 206 aaKnown RBP8.5□□□□□ -1.05
PRKCB-207ENST00000486868 PRR31Q5SQ13 230 aa8.5□□□□□ -1.05
PRKCB-207ENST00000486868 C14orf178Q8N769 122 aaPredicted RBP8.5□□□□□ -1.05
PRKCB-207ENST00000486868 LINC01587Q99440 93 aa8.5□□□□□ -1.05
PRKCB-207ENST00000486868 TRBV6-5A0A0K0K1A5 114 aa8.49□□□□□ -1.05
PRKCB-207ENST00000486868 A8MWV9 139 aa8.49□□□□□ -1.05
PRKCB-207ENST00000486868 NCR2O95944 276 aa8.49□□□□□ -1.05
PRKCB-207ENST00000486868 FXYD7P58549 80 aa8.49□□□□□ -1.05
PRKCB-207ENST00000486868 PMCHL1Q16048 86 aa8.49□□□□□ -1.05
PRKCB-207ENST00000486868 TEX43Q6ZNM6 134 aa8.49□□□□□ -1.05
PRKCB-207ENST00000486868 SPATA12Q7Z6I5 190 aa8.49□□□□□ -1.05
PRKCB-207ENST00000486868 ZNF747Q9BV97 191 aa8.49□□□□□ -1.05
PRKCB-207ENST00000486868 SORL1Q92673 2214 aa8.48□□□□□ -1.05
PRKCB-207ENST00000486868 LOC389332A0A1B0GUA5 103 aa8.48□□□□□ -1.05
PRKCB-207ENST00000486868 LINC01549A6NIU2 74 aa8.48□□□□□ -1.05
PRKCB-207ENST00000486868 HBDP02042 147 aa8.48□□□□□ -1.05
PRKCB-207ENST00000486868 CRYGDP07320 174 aa8.48□□□□□ -1.05
PRKCB-207ENST00000486868 FCER1GP30273 86 aa8.48□□□□□ -1.05
PRKCB-207ENST00000486868 KRTDAPP60985 99 aa8.48□□□□□ -1.05
PRKCB-207ENST00000486868 SUMO2P61956 95 aaKnown RBP8.48□□□□□ -1.05
PRKCB-207ENST00000486868 PET117Q6UWS5 81 aa8.48□□□□□ -1.05
PRKCB-207ENST00000486868 C1orf158Q8N1D5 194 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms