RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 ICOSQ9Y6W8 199 aa12.63□□□□□ -0.39
COL1A1-207ENST00000486572 PGPEP1LA6NFU8 196 aa12.62□□□□□ -0.39
COL1A1-207ENST00000486572 TAGLN2P37802 199 aaKnown RBP12.62□□□□□ -0.39
COL1A1-207ENST00000486572 BLOC1S1P78537 153 aa12.62□□□□□ -0.39
COL1A1-207ENST00000486572 ZNF506Q5JVG8 444 aa12.62□□□□□ -0.39
COL1A1-207ENST00000486572 DNLZQ5SXM8 178 aa12.62□□□□□ -0.39
COL1A1-207ENST00000486572 ZNRF2Q8NHG8 242 aa12.62□□□□□ -0.39
COL1A1-207ENST00000486572 VAX2Q9UIW0 290 aa12.62□□□□□ -0.39
COL1A1-207ENST00000486572 H3BVH4 76 aa12.61□□□□□ -0.39
COL1A1-207ENST00000486572 M0R2N4 97 aa12.61□□□□□ -0.39
COL1A1-207ENST00000486572 TMSB15BA0A087X1C1 80 aa12.6□□□□□ -0.39
COL1A1-207ENST00000486572 GRIFINA4D1Z8 144 aa12.6□□□□□ -0.39
COL1A1-207ENST00000486572 RS1O15537 224 aa12.6□□□□□ -0.39
COL1A1-207ENST00000486572 ESRGQ1W209 222 aa12.6□□□□□ -0.39
COL1A1-207ENST00000486572 CENPWQ5EE01 88 aa12.6□□□□□ -0.39
COL1A1-207ENST00000486572 PIK3CD-AS1Q5SR53 167 aa12.6□□□□□ -0.39
COL1A1-207ENST00000486572 CFAP126Q5VTH2 177 aa12.6□□□□□ -0.39
COL1A1-207ENST00000486572 CIDEAO60543 219 aa12.59□□□□□ -0.39
COL1A1-207ENST00000486572 MRPL23Q16540 153 aaKnown RBP12.59□□□□□ -0.39
COL1A1-207ENST00000486572 PRR27Q6MZM9 219 aa12.59□□□□□ -0.39
COL1A1-207ENST00000486572 Q6ZR54 194 aa12.59□□□□□ -0.39
COL1A1-207ENST00000486572 PCNPQ8WW12 178 aaKnown RBP12.59□□□□□ -0.39
COL1A1-207ENST00000486572 MED9Q9NWA0 146 aa12.59□□□□□ -0.39
COL1A1-207ENST00000486572 MRPS16Q9Y3D3 137 aaKnown RBP12.59□□□□□ -0.39
COL1A1-207ENST00000486572 DNAH6Q9C0G6 4158 aa12.58□□□□□ -0.4
COL1A1-207ENST00000486572 ARMS2P0C7Q2 107 aa12.58□□□□□ -0.4
COL1A1-207ENST00000486572 GATA1P15976 413 aaPredicted RBP12.58□□□□□ -0.4
COL1A1-207ENST00000486572 ZNF575Q86XF7 245 aa12.58□□□□□ -0.4
COL1A1-207ENST00000486572 UPK3BQ9BT76 320 aa12.58□□□□□ -0.4
COL1A1-207ENST00000486572 A8MWV9 139 aa12.57□□□□□ -0.4
COL1A1-207ENST00000486572 K7EQD1 137 aa12.57□□□□□ -0.4
COL1A1-207ENST00000486572 GYPEP15421 78 aa12.57□□□□□ -0.4
COL1A1-207ENST00000486572 SRIP30626 198 aa12.57□□□□□ -0.4
COL1A1-207ENST00000486572 GNG4P50150 75 aa12.57□□□□□ -0.4
COL1A1-207ENST00000486572 SYT8Q8NBV8 401 aa12.57□□□□□ -0.4
COL1A1-207ENST00000486572 LYPD6BQ8NI32 183 aa12.57□□□□□ -0.4
COL1A1-207ENST00000486572 SMIM12Q96EX1 92 aa12.57□□□□□ -0.4
COL1A1-207ENST00000486572 CXCL1P09341 107 aa12.56□□□□□ -0.4
COL1A1-207ENST00000486572 RPL19P84098 196 aaKnown RBP12.56□□□□□ -0.4
COL1A1-207ENST00000486572 NEGR1Q7Z3B1 354 aa12.56□□□□□ -0.4
COL1A1-207ENST00000486572 SCRT2Q9NQ03 307 aa12.56□□□□□ -0.4
COL1A1-207ENST00000486572 PHLDA3Q9Y5J5 127 aa12.56□□□□□ -0.4
COL1A1-207ENST00000486572 IGHV3-73A0A0B4J1V6 119 aa12.55□□□□□ -0.4
COL1A1-207ENST00000486572 NBDYA0A0U1RRE5 68 aa12.55□□□□□ -0.4
COL1A1-207ENST00000486572 RAB19A4D1S5 217 aa12.55□□□□□ -0.4
COL1A1-207ENST00000486572 IGLV2-8P01709 118 aa12.55□□□□□ -0.4
COL1A1-207ENST00000486572 MED14OSP0DP75 135 aa12.55□□□□□ -0.4
COL1A1-207ENST00000486572 MGST1P10620 155 aaKnown RBP12.55□□□□□ -0.4
COL1A1-207ENST00000486572 PARLQ9H300 379 aa12.55□□□□□ -0.4
COL1A1-207ENST00000486572 Q9H8V8 135 aa12.55□□□□□ -0.4
COL1A1-207ENST00000486572 TRBV20OR9-2A0A075B6H5 130 aa12.54□□□□□ -0.4
COL1A1-207ENST00000486572 TRBV6-4A0A1B0GX49 114 aa12.54□□□□□ -0.4
COL1A1-207ENST00000486572 RBFOX3A6NFN3 312 aa12.54□□□□□ -0.4
COL1A1-207ENST00000486572 RHOHQ15669 191 aa12.54□□□□□ -0.4
COL1A1-207ENST00000486572 DMRTA1Q5VZB9 504 aa12.54□□□□□ -0.4
COL1A1-207ENST00000486572 ZFP2Q6ZN57 461 aa12.54□□□□□ -0.4
COL1A1-207ENST00000486572 SLC25A29Q8N8R3 303 aa12.54□□□□□ -0.4
COL1A1-207ENST00000486572 LOC100131303A0A0U1RQF7 123 aa12.53□□□□□ -0.4
COL1A1-207ENST00000486572 M0R381 172 aa12.53□□□□□ -0.4
COL1A1-207ENST00000486572 LYPD5Q6UWN5 251 aa12.53□□□□□ -0.4
COL1A1-207ENST00000486572 ZFP82Q8N141 532 aa12.53□□□□□ -0.4
COL1A1-207ENST00000486572 PRADC1Q9BSG0 188 aa12.53□□□□□ -0.4
COL1A1-207ENST00000486572 EPPK1P58107 5090 aaKnown RBP12.52□□□□□ -0.4
COL1A1-207ENST00000486572 LINC00336Q6ZUF6 198 aa12.52□□□□□ -0.41
COL1A1-207ENST00000486572 SH2D6Q7Z4S9 175 aa12.52□□□□□ -0.41
COL1A1-207ENST00000486572 DAZAP1Q96EP5 407 aaKnown RBP12.52□□□□□ -0.41
COL1A1-207ENST00000486572 JPT2Q9H910 190 aa12.52□□□□□ -0.41
COL1A1-207ENST00000486572 TMEM250H0YL14 139 aa12.51□□□□□ -0.41
COL1A1-207ENST00000486572 RHODO00212 210 aa12.51□□□□□ -0.41
COL1A1-207ENST00000486572 RTL8CO15255 209 aa12.51□□□□□ -0.41
COL1A1-207ENST00000486572 NXPH4O95158 308 aa12.51□□□□□ -0.41
COL1A1-207ENST00000486572 TTC32Q5I0X7 151 aa12.51□□□□□ -0.41
COL1A1-207ENST00000486572 SOHLH1Q5JUK2 328 aa12.51□□□□□ -0.41
COL1A1-207ENST00000486572 C1orf134Q5TEV5 83 aa12.51□□□□□ -0.41
COL1A1-207ENST00000486572 UFSP1Q6NVU6 142 aa12.51□□□□□ -0.41
COL1A1-207ENST00000486572 SFRP2Q96HF1 295 aa12.51□□□□□ -0.41
COL1A1-207ENST00000486572 SAMD10Q9BYL1 202 aa12.51□□□□□ -0.41
COL1A1-207ENST00000486572 BIN3Q9NQY0 253 aa12.51□□□□□ -0.41
COL1A1-207ENST00000486572 C19orf71A6NCJ1 209 aa12.5□□□□□ -0.41
COL1A1-207ENST00000486572 SNAI2O43623 268 aa12.5□□□□□ -0.41
COL1A1-207ENST00000486572 TOR2AQ5JU69 321 aa12.5□□□□□ -0.41
COL1A1-207ENST00000486572 SIVA1O15304 175 aa12.49□□□□□ -0.41
COL1A1-207ENST00000486572 OR5AL1P0C617 328 aa12.49□□□□□ -0.41
COL1A1-207ENST00000486572 FAM74A4Q5TZK3 123 aa12.49□□□□□ -0.41
COL1A1-207ENST00000486572 Q6ZSN1 163 aa12.49□□□□□ -0.41
COL1A1-207ENST00000486572 OR10AG1Q8NH19 301 aa12.49□□□□□ -0.41
COL1A1-207ENST00000486572 SSBP4Q9BWG4 385 aaPredicted RBP12.49□□□□□ -0.41
COL1A1-207ENST00000486572 A0A087WWL8 130 aa12.48□□□□□ -0.41
COL1A1-207ENST00000486572 A0A1W2PPQ1 181 aa12.48□□□□□ -0.41
COL1A1-207ENST00000486572 P01737 135 aa12.48□□□□□ -0.41
COL1A1-207ENST00000486572 RPS20P60866 119 aaKnown RBP12.48□□□□□ -0.41
COL1A1-207ENST00000486572 TEX261Q6UWH6 196 aa12.48□□□□□ -0.41
COL1A1-207ENST00000486572 OR2D3Q8NGH3 330 aa12.48□□□□□ -0.41
COL1A1-207ENST00000486572 FAM210AQ96ND0 272 aa12.48□□□□□ -0.41
COL1A1-207ENST00000486572 EIF5A2Q9GZV4 153 aaKnown RBP12.48□□□□□ -0.41
COL1A1-207ENST00000486572 KRTAP1-5Q9BYS1 174 aa12.47□□□□□ -0.41
COL1A1-207ENST00000486572 DNAH10Q8IVF4 4471 aa12.47□□□□□ -0.41
COL1A1-207ENST00000486572 XKRY2A2RUG3 117 aa12.46□□□□□ -0.41
COL1A1-207ENST00000486572 PRSS29PA6NIE9 313 aa12.46□□□□□ -0.41
COL1A1-207ENST00000486572 NDUFS6O75380 124 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms