RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 ORM1P02763 201 aa6.86□□□□□ -1.31
COL12A1-208ENST00000486533 CTSGP08311 255 aa6.86□□□□□ -1.31
COL12A1-208ENST00000486533 TMEM97Q5BJF2 176 aa6.86□□□□□ -1.31
COL12A1-208ENST00000486533 C5orf56Q8N8D9 126 aa6.86□□□□□ -1.31
COL12A1-208ENST00000486533 ZNF502Q8TBZ5 544 aa6.86□□□□□ -1.31
COL12A1-208ENST00000486533 MRAPQ8TCY5 172 aa6.86□□□□□ -1.31
COL12A1-208ENST00000486533 TMSB15BA0A087X1C1 80 aa6.86□□□□□ -1.31
COL12A1-208ENST00000486533 IGHV7-81A0A0B4J1V7 117 aa6.86□□□□□ -1.31
COL12A1-208ENST00000486533 HLA-DRB4P13762 266 aa6.86□□□□□ -1.31
COL12A1-208ENST00000486533 ZNF138P52744 262 aa6.86□□□□□ -1.31
COL12A1-208ENST00000486533 AMN1Q8IY45 258 aa6.86□□□□□ -1.31
COL12A1-208ENST00000486533 LINC00527Q9UJ94 153 aa6.86□□□□□ -1.31
COL12A1-208ENST00000486533 HLA-DRB4X5D2U9 266 aa6.86□□□□□ -1.31
COL12A1-208ENST00000486533 LOC389332A0A1B0GUA5 103 aa6.85□□□□□ -1.31
COL12A1-208ENST00000486533 TMEM213A2RRL7 107 aa6.85□□□□□ -1.31
COL12A1-208ENST00000486533 FAM223BA6NKX1 122 aa6.85□□□□□ -1.31
COL12A1-208ENST00000486533 H3BRM9 83 aa6.85□□□□□ -1.31
COL12A1-208ENST00000486533 TAX1BP3O14907 124 aa6.85□□□□□ -1.31
COL12A1-208ENST00000486533 EGR2P11161 476 aaPredicted RBP6.85□□□□□ -1.31
COL12A1-208ENST00000486533 FCER1GP30273 86 aa6.85□□□□□ -1.31
COL12A1-208ENST00000486533 C15orf32Q32M92 178 aa6.85□□□□□ -1.31
COL12A1-208ENST00000486533 FAM223AQ8IWN6 122 aa6.85□□□□□ -1.31
COL12A1-208ENST00000486533 BOD1L2Q8IYS8 172 aa6.85□□□□□ -1.31
COL12A1-208ENST00000486533 Q8N9W7 124 aa6.85□□□□□ -1.31
COL12A1-208ENST00000486533 MUC21A0A0G2JKD1 596 aa6.84□□□□□ -1.31
COL12A1-208ENST00000486533 MUC21A0A140T8X8 626 aa6.84□□□□□ -1.31
COL12A1-208ENST00000486533 K7EMI3 77 aa6.84□□□□□ -1.31
COL12A1-208ENST00000486533 K7ERU9 68 aa6.84□□□□□ -1.31
COL12A1-208ENST00000486533 NDPQ00604 133 aa6.84□□□□□ -1.31
COL12A1-208ENST00000486533 ECSCRQ19T08 205 aa6.84□□□□□ -1.31
COL12A1-208ENST00000486533 MUC21Q5SSG8 566 aa6.84□□□□□ -1.31
COL12A1-208ENST00000486533 SAMD13Q5VXD3 122 aa6.84□□□□□ -1.31
COL12A1-208ENST00000486533 WFDC9Q8NEX5 89 aa6.84□□□□□ -1.31
COL12A1-208ENST00000486533 HIGD1BQ9P298 99 aa6.84□□□□□ -1.31
COL12A1-208ENST00000486533 C7orf71A4D174 169 aa6.83□□□□□ -1.32
COL12A1-208ENST00000486533 LINC01549A6NIU2 74 aa6.83□□□□□ -1.32
COL12A1-208ENST00000486533 BUB3O43684 328 aa6.83□□□□□ -1.32
COL12A1-208ENST00000486533 PPP1R17O96001 155 aa6.83□□□□□ -1.32
COL12A1-208ENST00000486533 IGHG2P01859 326 aa6.83□□□□□ -1.32
COL12A1-208ENST00000486533 CDKN1BP46527 198 aa6.83□□□□□ -1.32
COL12A1-208ENST00000486533 ATP5G2Q06055 141 aa6.83□□□□□ -1.32
COL12A1-208ENST00000486533 LCE3BQ5TA77 95 aa6.83□□□□□ -1.32
COL12A1-208ENST00000486533 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.83□□□□□ -1.32
COL12A1-208ENST00000486533 Q8N8P6 123 aa6.83□□□□□ -1.32
COL12A1-208ENST00000486533 KLHL30-AS1Q8NEE0 82 aa6.83□□□□□ -1.32
COL12A1-208ENST00000486533 MRAP2Q96G30 205 aa6.83□□□□□ -1.32
COL12A1-208ENST00000486533 S4R3C0 116 aa6.83□□□□□ -1.32
COL12A1-208ENST00000486533 CBY3A6NI87 242 aa6.82□□□□□ -1.32
COL12A1-208ENST00000486533 LINC01548A6NM66 108 aa6.82□□□□□ -1.32
COL12A1-208ENST00000486533 PRSS47A8MTI9 375 aa6.82□□□□□ -1.32
COL12A1-208ENST00000486533 H3BUA1 57 aa6.82□□□□□ -1.32
COL12A1-208ENST00000486533 TNFRSF6BO95407 300 aa6.82□□□□□ -1.32
COL12A1-208ENST00000486533 NPYP01303 97 aa6.82□□□□□ -1.32
COL12A1-208ENST00000486533 C9orf47Q6ZRZ4 202 aa6.82□□□□□ -1.32
COL12A1-208ENST00000486533 C18orf65Q6ZTR6 163 aa6.82□□□□□ -1.32
COL12A1-208ENST00000486533 C2orf91Q6ZV80 131 aa6.82□□□□□ -1.32
COL12A1-208ENST00000486533 LINC00482Q8N8I6 264 aa6.82□□□□□ -1.32
COL12A1-208ENST00000486533 OR5A1Q8NGJ0 315 aa6.82□□□□□ -1.32
COL12A1-208ENST00000486533 MYOZ3Q8TDC0 251 aa6.82□□□□□ -1.32
COL12A1-208ENST00000486533 VGLL1Q99990 258 aa6.82□□□□□ -1.32
COL12A1-208ENST00000486533 IGHV4-4A0A075B6R2 117 aa6.82□□□□□ -1.32
COL12A1-208ENST00000486533 GAGE10A6NGK3 116 aa6.82□□□□□ -1.32
COL12A1-208ENST00000486533 C9orf118A6NHY6 69 aa6.82□□□□□ -1.32
COL12A1-208ENST00000486533 OVOL1O14753 267 aa6.82□□□□□ -1.32
COL12A1-208ENST00000486533 ATP6V0E1O15342 81 aa6.82□□□□□ -1.32
COL12A1-208ENST00000486533 DPM2O94777 84 aa6.82□□□□□ -1.32
COL12A1-208ENST00000486533 MED14OSP0DP75 135 aa6.82□□□□□ -1.32
COL12A1-208ENST00000486533 HOXD3P31249 432 aaPredicted RBP6.82□□□□□ -1.32
COL12A1-208ENST00000486533 CRIP2P52943 208 aaPredicted RBP6.82□□□□□ -1.32
COL12A1-208ENST00000486533 Q8TAT8 98 aa6.82□□□□□ -1.32
COL12A1-208ENST00000486533 LINC00477Q96M19 166 aa6.82□□□□□ -1.32
COL12A1-208ENST00000486533 SMAD5-AS1Q9Y6J3 95 aa6.82□□□□□ -1.32
COL12A1-208ENST00000486533 COL7A1Q02388 2944 aa6.81□□□□□ -1.32
COL12A1-208ENST00000486533 A0A096LNJ9 63 aa6.81□□□□□ -1.32
COL12A1-208ENST00000486533 TRBV7-9A0A0J9YWB2 115 aa6.81□□□□□ -1.32
COL12A1-208ENST00000486533 BRI3O95415 125 aa6.81□□□□□ -1.32
COL12A1-208ENST00000486533 IGHV3-23P01764 117 aa6.81□□□□□ -1.32
COL12A1-208ENST00000486533 IGKCP01834 107 aa6.81□□□□□ -1.32
COL12A1-208ENST00000486533 CLEC3BP05452 202 aa6.81□□□□□ -1.32
COL12A1-208ENST00000486533 PRSS1P07477 247 aa6.81□□□□□ -1.32
COL12A1-208ENST00000486533 FGF6P10767 208 aa6.81□□□□□ -1.32
COL12A1-208ENST00000486533 EVI2AP22794 236 aa6.81□□□□□ -1.32
COL12A1-208ENST00000486533 LEPP41159 167 aa6.81□□□□□ -1.32
COL12A1-208ENST00000486533 LAGE3Q14657 143 aa6.81□□□□□ -1.32
COL12A1-208ENST00000486533 KIR3DS1Q14943 382 aa6.81□□□□□ -1.32
COL12A1-208ENST00000486533 ORMDL2Q53FV1 153 aa6.81□□□□□ -1.32
COL12A1-208ENST00000486533 SPANXN1Q5VSR9 72 aa6.81□□□□□ -1.32
COL12A1-208ENST00000486533 LCNL1Q6ZST4 164 aa6.81□□□□□ -1.32
COL12A1-208ENST00000486533 KRTAP19-1Q8IUB9 90 aa6.81□□□□□ -1.32
COL12A1-208ENST00000486533 OR2K2Q8NGT1 345 aa6.81□□□□□ -1.32
COL12A1-208ENST00000486533 DUX3Q96PT4 197 aa6.81□□□□□ -1.32
COL12A1-208ENST00000486533 SNAI2O43623 268 aa6.8□□□□□ -1.32
COL12A1-208ENST00000486533 NCR2O95944 276 aa6.8□□□□□ -1.32
COL12A1-208ENST00000486533 PLNP26678 52 aa6.8□□□□□ -1.32
COL12A1-208ENST00000486533 NMUP48645 174 aa6.8□□□□□ -1.32
COL12A1-208ENST00000486533 TAL2Q16559 108 aa6.8□□□□□ -1.32
COL12A1-208ENST00000486533 ANKRD39Q53RE8 183 aa6.8□□□□□ -1.32
COL12A1-208ENST00000486533 AMMECR1LQ6DCA0 310 aa6.8□□□□□ -1.32
COL12A1-208ENST00000486533 CLEC19AQ6UXS0 136 aa6.8□□□□□ -1.32
COL12A1-208ENST00000486533 OR10J6PQ8NGY7 276 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms