RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 C16orf74Q96GX8 76 aa4.04□□□□□ -1.76
COPS3-208ENST00000486032 KCNS1Q96KK3 526 aa4.04□□□□□ -1.76
COPS3-208ENST00000486032 NEU1Q99519 415 aa4.04□□□□□ -1.76
COPS3-208ENST00000486032 MLST8Q9BVC4 326 aa4.04□□□□□ -1.76
COPS3-208ENST00000486032 TPPP3Q9BW30 176 aa4.04□□□□□ -1.76
COPS3-208ENST00000486032 SMDT1Q9H4I9 107 aa4.04□□□□□ -1.76
COPS3-208ENST00000486032 NOP10Q9NPE3 64 aaKnown RBP4.04□□□□□ -1.76
COPS3-208ENST00000486032 BIN3Q9NQY0 253 aa4.04□□□□□ -1.76
COPS3-208ENST00000486032 MRPL16Q9NX20 251 aaKnown RBP4.04□□□□□ -1.76
COPS3-208ENST00000486032 MDFICQ9P1T7 246 aa4.04□□□□□ -1.76
COPS3-208ENST00000486032 NAT8Q9UHE5 227 aa4.04□□□□□ -1.76
COPS3-208ENST00000486032 CELA1Q9UNI1 258 aa4.04□□□□□ -1.76
COPS3-208ENST00000486032 HYDINQ4G0P3 5121 aa4.04□□□□□ -1.76
COPS3-208ENST00000486032 CSMD3Q7Z407 3707 aa4.04□□□□□ -1.76
COPS3-208ENST00000486032 TRGV1A0A0A0MS02 117 aa4.03□□□□□ -1.76
COPS3-208ENST00000486032 MUC21A0A0G2JKD1 596 aa4.03□□□□□ -1.76
COPS3-208ENST00000486032 MUC21A0A140T8X8 626 aa4.03□□□□□ -1.76
COPS3-208ENST00000486032 GAGE12BA1L429 117 aa4.03□□□□□ -1.76
COPS3-208ENST00000486032 TMEM218A2RU14 115 aa4.03□□□□□ -1.76
COPS3-208ENST00000486032 KRBOX1C9JBD0 128 aa4.03□□□□□ -1.76
COPS3-208ENST00000486032 H3BVH4 76 aa4.03□□□□□ -1.76
COPS3-208ENST00000486032 GAGE7O76087 117 aa4.03□□□□□ -1.76
COPS3-208ENST00000486032 IGHV3-53P01767 116 aa4.03□□□□□ -1.76
COPS3-208ENST00000486032 PLA2G1BP04054 148 aaKnown RBP4.03□□□□□ -1.76
COPS3-208ENST00000486032 GAGE12FP0CL80 117 aa4.03□□□□□ -1.76
COPS3-208ENST00000486032 GAGE12GP0CL81 117 aa4.03□□□□□ -1.76
COPS3-208ENST00000486032 GAGE12IP0CL82 117 aa4.03□□□□□ -1.76
COPS3-208ENST00000486032 ASIPP42127 132 aa4.03□□□□□ -1.76
COPS3-208ENST00000486032 NANOS2P60321 138 aaKnown RBP4.03□□□□□ -1.76
COPS3-208ENST00000486032 ERVFC1-1P60608 527 aa4.03□□□□□ -1.76
COPS3-208ENST00000486032 RPL23P62829 140 aaKnown RBP4.03□□□□□ -1.76
COPS3-208ENST00000486032 FAM74A3Q4VXF1 159 aa4.03□□□□□ -1.76
COPS3-208ENST00000486032 IBA57Q5T440 356 aaKnown RBP4.03□□□□□ -1.76
COPS3-208ENST00000486032 KRTAP5-11Q6L8G4 156 aa4.03□□□□□ -1.76
COPS3-208ENST00000486032 UQCC3Q6UW78 93 aa4.03□□□□□ -1.76
COPS3-208ENST00000486032 LINC01551Q86U37 167 aa4.03□□□□□ -1.76
COPS3-208ENST00000486032 NUDT10Q8NFP7 164 aa4.03□□□□□ -1.76
COPS3-208ENST00000486032 RNASE8Q8TDE3 154 aaKnown RBP4.03□□□□□ -1.76
COPS3-208ENST00000486032 TMEM263Q8WUH6 116 aaKnown RBP4.03□□□□□ -1.76
COPS3-208ENST00000486032 NUDT11Q96G61 164 aa4.03□□□□□ -1.76
COPS3-208ENST00000486032 ALMS1Q8TCU4 4167 aa4.03□□□□□ -1.77
COPS3-208ENST00000486032 TRGV2A0A075B6R0 118 aa4.02□□□□□ -1.77
COPS3-208ENST00000486032 IGHV3-16A0A0C4DH30 117 aa4.02□□□□□ -1.77
COPS3-208ENST00000486032 PLAC8L1A1L4L8 177 aa4.02□□□□□ -1.77
COPS3-208ENST00000486032 C19orf71A6NCJ1 209 aa4.02□□□□□ -1.77
COPS3-208ENST00000486032 NDUFS6O75380 124 aaKnown RBP4.02□□□□□ -1.77
COPS3-208ENST00000486032 ARMS2P0C7Q2 107 aa4.02□□□□□ -1.77
COPS3-208ENST00000486032 SPART-AS1P0CW21 52 aa4.02□□□□□ -1.77
COPS3-208ENST00000486032 ADCYAP1P18509 176 aa4.02□□□□□ -1.77
COPS3-208ENST00000486032 TCL1AP56279 114 aa4.02□□□□□ -1.77
COPS3-208ENST00000486032 DAD1P61803 113 aa4.02□□□□□ -1.77
COPS3-208ENST00000486032 ZFAND6Q6FIF0 208 aa4.02□□□□□ -1.77
COPS3-208ENST00000486032 ZNF493Q6ZR52 646 aa4.02□□□□□ -1.77
COPS3-208ENST00000486032 Q6ZTI0 123 aa4.02□□□□□ -1.77
COPS3-208ENST00000486032 COX8CQ7Z4L0 72 aa4.02□□□□□ -1.77
COPS3-208ENST00000486032 C11orf72Q8NBR9 251 aa4.02□□□□□ -1.77
COPS3-208ENST00000486032 OR10G8Q8NGN5 311 aa4.02□□□□□ -1.77
COPS3-208ENST00000486032 C11orf45Q8TAV5 145 aa4.02□□□□□ -1.77
COPS3-208ENST00000486032 SMIM12Q96EX1 92 aa4.02□□□□□ -1.77
COPS3-208ENST00000486032 C11orf68Q9H3H3 251 aaKnown RBP4.02□□□□□ -1.77
COPS3-208ENST00000486032 RPP21Q9H633 154 aaKnown RBP4.02□□□□□ -1.77
COPS3-208ENST00000486032 DKK2Q9UBU2 259 aa4.02□□□□□ -1.77
COPS3-208ENST00000486032 STAB2Q8WWQ8 2551 aa4.02□□□□□ -1.77
COPS3-208ENST00000486032 IGHV3-73A0A0B4J1V6 119 aa4.01□□□□□ -1.77
COPS3-208ENST00000486032 XKRY2A2RUG3 117 aa4.01□□□□□ -1.77
COPS3-208ENST00000486032 M0R381 172 aa4.01□□□□□ -1.77
COPS3-208ENST00000486032 RNASE3P12724 160 aaKnown RBP4.01□□□□□ -1.77
COPS3-208ENST00000486032 KRTAP10-7P60409 375 aaPredicted RBP4.01□□□□□ -1.77
COPS3-208ENST00000486032 RPS20P60866 119 aaKnown RBP4.01□□□□□ -1.77
COPS3-208ENST00000486032 TDRG1Q3Y452 100 aa4.01□□□□□ -1.77
COPS3-208ENST00000486032 SPANXN1Q5VSR9 72 aa4.01□□□□□ -1.77
COPS3-208ENST00000486032 Q6ZTC4 211 aa4.01□□□□□ -1.77
COPS3-208ENST00000486032 C15orf54Q8N8G6 183 aa4.01□□□□□ -1.77
COPS3-208ENST00000486032 IL17DQ8TAD2 202 aa4.01□□□□□ -1.77
COPS3-208ENST00000486032 ISOC2Q96AB3 205 aa4.01□□□□□ -1.77
COPS3-208ENST00000486032 SFRP2Q96HF1 295 aa4.01□□□□□ -1.77
COPS3-208ENST00000486032 LINC00467Q9BRT7 94 aa4.01□□□□□ -1.77
COPS3-208ENST00000486032 EDA2RQ9HAV5 297 aa4.01□□□□□ -1.77
COPS3-208ENST00000486032 PHLDA3Q9Y5J5 127 aa4.01□□□□□ -1.77
COPS3-208ENST00000486032 LY96Q9Y6Y9 160 aa4.01□□□□□ -1.77
COPS3-208ENST00000486032 NBEAL2Q6ZNJ1 2754 aa4.01□□□□□ -1.77
COPS3-208ENST00000486032 LYRM9A8MSI8 78 aa4□□□□□ -1.77
COPS3-208ENST00000486032 F5H768 121 aa4□□□□□ -1.77
COPS3-208ENST00000486032 M0R2P5 195 aa4□□□□□ -1.77
COPS3-208ENST00000486032 SPINK4O60575 86 aa4□□□□□ -1.77
COPS3-208ENST00000486032 APOC3P02656 99 aa4□□□□□ -1.77
COPS3-208ENST00000486032 C12orf74Q32Q52 190 aa4□□□□□ -1.77
COPS3-208ENST00000486032 RNF212Q495C1 297 aa4□□□□□ -1.77
COPS3-208ENST00000486032 ZNF876PQ49A33 203 aa4□□□□□ -1.77
COPS3-208ENST00000486032 LYZL1Q6UWQ5 148 aa4□□□□□ -1.77
COPS3-208ENST00000486032 FAM231DQ6ZW35 169 aa4□□□□□ -1.77
COPS3-208ENST00000486032 FER1L6-AS1Q8NA97 138 aa4□□□□□ -1.77
COPS3-208ENST00000486032 PGLYRP4Q96LB8 373 aa4□□□□□ -1.77
COPS3-208ENST00000486032 C9orf85Q96MD7 179 aa4□□□□□ -1.77
COPS3-208ENST00000486032 SPXQ9BT56 116 aa4□□□□□ -1.77
COPS3-208ENST00000486032 SEC11CQ9BY50 192 aa4□□□□□ -1.77
COPS3-208ENST00000486032 OSTCQ9NRP0 149 aa4□□□□□ -1.77
COPS3-208ENST00000486032 LYSTQ99698 3801 aa3.99□□□□□ -1.77
COPS3-208ENST00000486032 VPS13DQ5THJ4 4388 aa3.99□□□□□ -1.77
COPS3-208ENST00000486032 DEFB131BA0A096LNP1 70 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms