RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 RAB14P61106 215 aa8.29□□□□□ -1.08
HPS4-214ENST00000485842 DNLZQ5SXM8 178 aa8.29□□□□□ -1.08
HPS4-214ENST00000485842 LGALS9CQ6DKI2 356 aa8.29□□□□□ -1.08
HPS4-214ENST00000485842 POM121L12Q8N7R1 296 aa8.29□□□□□ -1.08
HPS4-214ENST00000485842 SMIM7Q9BQ49 75 aa8.29□□□□□ -1.08
HPS4-214ENST00000485842 BIN3Q9NQY0 253 aa8.29□□□□□ -1.08
HPS4-214ENST00000485842 PHLDA3Q9Y5J5 127 aa8.29□□□□□ -1.08
HPS4-214ENST00000485842 NACAE9PAV3 2078 aa8.28□□□□□ -1.08
HPS4-214ENST00000485842 C19orf71A6NCJ1 209 aa8.28□□□□□ -1.08
HPS4-214ENST00000485842 M0R381 172 aa8.28□□□□□ -1.08
HPS4-214ENST00000485842 P01737 135 aa8.28□□□□□ -1.08
HPS4-214ENST00000485842 FHL2Q14192 279 aa8.28□□□□□ -1.08
HPS4-214ENST00000485842 UBE2DNLQ8IWF7 75 aa8.28□□□□□ -1.08
HPS4-214ENST00000485842 SYT8Q8NBV8 401 aa8.28□□□□□ -1.08
HPS4-214ENST00000485842 OR2D3Q8NGH3 330 aa8.28□□□□□ -1.08
HPS4-214ENST00000485842 OCC1Q8TAD7 63 aa8.28□□□□□ -1.08
HPS4-214ENST00000485842 DYNC2H1Q8NCM8 4307 aaKnown RBP8.28□□□□□ -1.08
HPS4-214ENST00000485842 IGHV3-73A0A0B4J1V6 119 aa8.27□□□□□ -1.09
HPS4-214ENST00000485842 ZNF727A8MUV8 499 aa8.27□□□□□ -1.09
HPS4-214ENST00000485842 K7EN84 100 aa8.27□□□□□ -1.09
HPS4-214ENST00000485842 RS1O15537 224 aa8.27□□□□□ -1.09
HPS4-214ENST00000485842 PAX4O43316 350 aa8.27□□□□□ -1.09
HPS4-214ENST00000485842 CXCL1P09341 107 aa8.27□□□□□ -1.09
HPS4-214ENST00000485842 P0DMU3 169 aa8.27□□□□□ -1.09
HPS4-214ENST00000485842 FAM231AP0DMU4 169 aa8.27□□□□□ -1.09
HPS4-214ENST00000485842 FAM231CP0DMU5 169 aa8.27□□□□□ -1.09
HPS4-214ENST00000485842 GZMBP10144 247 aa8.27□□□□□ -1.09
HPS4-214ENST00000485842 SRSF3P84103 164 aaKnown RBP8.27□□□□□ -1.09
HPS4-214ENST00000485842 CFAP126Q5VTH2 177 aa8.27□□□□□ -1.09
HPS4-214ENST00000485842 ZNF575Q86XF7 245 aa8.27□□□□□ -1.09
HPS4-214ENST00000485842 PTH2Q96A98 100 aa8.27□□□□□ -1.09
HPS4-214ENST00000485842 VSIG2Q96IQ7 327 aa8.27□□□□□ -1.09
HPS4-214ENST00000485842 PRO0255Q9UI72 69 aa8.27□□□□□ -1.09
HPS4-214ENST00000485842 HHLA3Q9XRX5 114 aa8.27□□□□□ -1.09
HPS4-214ENST00000485842 ALMS1Q8TCU4 4167 aa8.27□□□□□ -1.09
HPS4-214ENST00000485842 LYSTQ99698 3801 aa8.26□□□□□ -1.09
HPS4-214ENST00000485842 MUC21A0A0G2JKD1 596 aa8.26□□□□□ -1.09
HPS4-214ENST00000485842 MUC21A0A140T8X8 626 aa8.26□□□□□ -1.09
HPS4-214ENST00000485842 NDUFS6O75380 124 aaKnown RBP8.26□□□□□ -1.09
HPS4-214ENST00000485842 CRYBA4P53673 196 aa8.26□□□□□ -1.09
HPS4-214ENST00000485842 RPS20P60866 119 aaKnown RBP8.26□□□□□ -1.09
HPS4-214ENST00000485842 IFITM2Q01629 132 aa8.26□□□□□ -1.09
HPS4-214ENST00000485842 SLAQ13239 276 aa8.26□□□□□ -1.09
HPS4-214ENST00000485842 PEA15Q15121 130 aa8.26□□□□□ -1.09
HPS4-214ENST00000485842 DMRTA1Q5VZB9 504 aa8.26□□□□□ -1.09
HPS4-214ENST00000485842 ZFP82Q8N141 532 aa8.26□□□□□ -1.09
HPS4-214ENST00000485842 TPPP3Q9BW30 176 aa8.26□□□□□ -1.09
HPS4-214ENST00000485842 RNASE7Q9H1E1 156 aaKnown RBP8.26□□□□□ -1.09
HPS4-214ENST00000485842 JPT2Q9H910 190 aa8.26□□□□□ -1.09
HPS4-214ENST00000485842 SCRT2Q9NQ03 307 aa8.26□□□□□ -1.09
HPS4-214ENST00000485842 A8MWV9 139 aa8.25□□□□□ -1.09
HPS4-214ENST00000485842 C9JQL5 133 aa8.25□□□□□ -1.09
HPS4-214ENST00000485842 H3BNG1 76 aa8.25□□□□□ -1.09
HPS4-214ENST00000485842 MED14OSP0DP75 135 aa8.25□□□□□ -1.09
HPS4-214ENST00000485842 GATA1P15976 413 aaPredicted RBP8.25□□□□□ -1.09
HPS4-214ENST00000485842 SSTP61278 116 aa8.25□□□□□ -1.09
HPS4-214ENST00000485842 NUDT10Q8NFP7 164 aa8.25□□□□□ -1.09
HPS4-214ENST00000485842 OR10AG1Q8NH19 301 aa8.25□□□□□ -1.09
HPS4-214ENST00000485842 NUDT11Q96G61 164 aa8.25□□□□□ -1.09
HPS4-214ENST00000485842 ICOSQ9Y6W8 199 aa8.25□□□□□ -1.09
HPS4-214ENST00000485842 PLECQ15149 4684 aaKnown RBP8.24□□□□□ -1.09
HPS4-214ENST00000485842 A0A096LPF7 62 aa8.24□□□□□ -1.09
HPS4-214ENST00000485842 XKRY2A2RUG3 117 aa8.24□□□□□ -1.09
HPS4-214ENST00000485842 SNAI2O43623 268 aa8.24□□□□□ -1.09
HPS4-214ENST00000485842 OR5AL1P0C617 328 aa8.24□□□□□ -1.09
HPS4-214ENST00000485842 GYPEP15421 78 aa8.24□□□□□ -1.09
HPS4-214ENST00000485842 PIK3CD-AS1Q5SR53 167 aa8.24□□□□□ -1.09
HPS4-214ENST00000485842 FAM74A4Q5TZK3 123 aa8.24□□□□□ -1.09
HPS4-214ENST00000485842 SPANXN1Q5VSR9 72 aa8.24□□□□□ -1.09
HPS4-214ENST00000485842 FER1L6-AS1Q8NA97 138 aa8.24□□□□□ -1.09
HPS4-214ENST00000485842 RPP21Q9H633 154 aaKnown RBP8.24□□□□□ -1.09
HPS4-214ENST00000485842 LY96Q9Y6Y9 160 aa8.24□□□□□ -1.09
HPS4-214ENST00000485842 KMT2CQ8NEZ4 4911 aaKnown RBP8.24□□□□□ -1.09
HPS4-214ENST00000485842 A0A087WWL8 130 aa8.23□□□□□ -1.09
HPS4-214ENST00000485842 LOC100131303A0A0U1RQF7 123 aa8.23□□□□□ -1.09
HPS4-214ENST00000485842 GATCO43716 136 aaKnown RBP8.23□□□□□ -1.09
HPS4-214ENST00000485842 CLLU1Q5K131 121 aa8.23□□□□□ -1.09
HPS4-214ENST00000485842 LINC01551Q86U37 167 aa8.23□□□□□ -1.09
HPS4-214ENST00000485842 SAMD10Q9BYL1 202 aa8.23□□□□□ -1.09
HPS4-214ENST00000485842 RHODO00212 210 aa8.22□□□□□ -1.09
HPS4-214ENST00000485842 CIDEAO60543 219 aa8.22□□□□□ -1.09
HPS4-214ENST00000485842 NXPH4O95158 308 aa8.22□□□□□ -1.09
HPS4-214ENST00000485842 IGLC6P0CF74 106 aa8.22□□□□□ -1.09
HPS4-214ENST00000485842 CCL18P55774 89 aa8.22□□□□□ -1.09
HPS4-214ENST00000485842 ERVFC1-1P60608 527 aa8.22□□□□□ -1.09
HPS4-214ENST00000485842 MRPL23Q16540 153 aaKnown RBP8.22□□□□□ -1.09
HPS4-214ENST00000485842 TMEM241Q24JQ0 296 aa8.22□□□□□ -1.09
HPS4-214ENST00000485842 RNF212Q495C1 297 aa8.22□□□□□ -1.09
HPS4-214ENST00000485842 FAM74A3Q4VXF1 159 aa8.22□□□□□ -1.09
HPS4-214ENST00000485842 SOHLH1Q5JUK2 328 aa8.22□□□□□ -1.09
HPS4-214ENST00000485842 FAM231DQ6ZW35 169 aa8.22□□□□□ -1.09
HPS4-214ENST00000485842 SFRP2Q96HF1 295 aa8.22□□□□□ -1.09
HPS4-214ENST00000485842 SSBP4Q9BWG4 385 aaPredicted RBP8.22□□□□□ -1.09
HPS4-214ENST00000485842 SMDT1Q9H4I9 107 aa8.22□□□□□ -1.09
HPS4-214ENST00000485842 LINC00588Q9Y4M8 146 aa8.22□□□□□ -1.09
HPS4-214ENST00000485842 K7EQD1 137 aa8.21□□□□□ -1.1
HPS4-214ENST00000485842 SRIP30626 198 aa8.21□□□□□ -1.1
HPS4-214ENST00000485842 RHOHQ15669 191 aa8.21□□□□□ -1.1
HPS4-214ENST00000485842 ADIRFQ15847 76 aa8.21□□□□□ -1.1
HPS4-214ENST00000485842 ZFP2Q6ZN57 461 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms