RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 SMKR1H3BMG3 65 aa12.36□□□□□ -0.43
CTSA-207ENST00000484855 NCR2O95944 276 aa12.36□□□□□ -0.43
CTSA-207ENST00000484855 CD7P09564 240 aa12.36□□□□□ -0.43
CTSA-207ENST00000484855 LINC00614P0C842 121 aa12.36□□□□□ -0.43
CTSA-207ENST00000484855 TDRG1Q3Y452 100 aa12.36□□□□□ -0.43
CTSA-207ENST00000484855 RBMY1BA6NDE4 496 aaKnown RBP12.35□□□□□ -0.43
CTSA-207ENST00000484855 RBMY1EA6NEQ0 496 aaKnown RBP12.35□□□□□ -0.43
CTSA-207ENST00000484855 PCP4L1A6NKN8 68 aa12.35□□□□□ -0.43
CTSA-207ENST00000484855 SPRY2O43597 315 aa12.35□□□□□ -0.43
CTSA-207ENST00000484855 RBMY1DP0C7P1 496 aaKnown RBP12.35□□□□□ -0.43
CTSA-207ENST00000484855 ODF3L2Q3SX64 289 aa12.35□□□□□ -0.43
CTSA-207ENST00000484855 FLNBO75369 2602 aaKnown RBP12.34□□□□□ -0.43
CTSA-207ENST00000484855 MUC4Q99102 2169 aa12.34□□□□□ -0.43
CTSA-207ENST00000484855 IGHV1OR15-1A0A075B7D0 117 aa12.34□□□□□ -0.43
CTSA-207ENST00000484855 PPBPP02775 128 aa12.34□□□□□ -0.43
CTSA-207ENST00000484855 PF4P02776 101 aa12.34□□□□□ -0.43
CTSA-207ENST00000484855 PRSS3P2Q8NHM4 247 aa12.33□□□□□ -0.44
CTSA-207ENST00000484855 OR11H12B2RN74 326 aa12.33□□□□□ -0.44
CTSA-207ENST00000484855 SCGB1D1O95968 90 aa12.33□□□□□ -0.44
CTSA-207ENST00000484855 NPYP01303 97 aa12.33□□□□□ -0.44
CTSA-207ENST00000484855 FA2HQ7L5A8 372 aa12.33□□□□□ -0.44
CTSA-207ENST00000484855 LOC389332A0A1B0GUA5 103 aa12.32□□□□□ -0.44
CTSA-207ENST00000484855 CRXO43186 299 aaPredicted RBP12.32□□□□□ -0.44
CTSA-207ENST00000484855 IGLV1-51P01701 117 aa12.32□□□□□ -0.44
CTSA-207ENST00000484855 PMCHL1Q16048 86 aa12.32□□□□□ -0.44
CTSA-207ENST00000484855 IGHV3-16A0A0C4DH30 117 aa12.32□□□□□ -0.44
CTSA-207ENST00000484855 IGHV1-24A0A0C4DH33 117 aa12.32□□□□□ -0.44
CTSA-207ENST00000484855 IFI27P40305 119 aaPredicted RBP12.32□□□□□ -0.44
CTSA-207ENST00000484855 KRTDAPP60985 99 aa12.32□□□□□ -0.44
CTSA-207ENST00000484855 Q8N1Y9 231 aa12.32□□□□□ -0.44
CTSA-207ENST00000484855 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.32□□□□□ -0.44
CTSA-207ENST00000484855 AP5S1Q9NUS5 200 aa12.32□□□□□ -0.44
CTSA-207ENST00000484855 LAMTOR2Q9Y2Q5 125 aa12.32□□□□□ -0.44
CTSA-207ENST00000484855 NXPH4O95158 308 aa12.31□□□□□ -0.44
CTSA-207ENST00000484855 RBMY1A1P0DJD3 496 aaKnown RBP12.31□□□□□ -0.44
CTSA-207ENST00000484855 RBMY1CP0DJD4 496 aa12.31□□□□□ -0.44
CTSA-207ENST00000484855 RBMY1FQ15415 496 aaKnown RBP12.31□□□□□ -0.44
CTSA-207ENST00000484855 OR2K2Q8NGT1 345 aa12.31□□□□□ -0.44
CTSA-207ENST00000484855 AP1S3Q96PC3 154 aa12.31□□□□□ -0.44
CTSA-207ENST00000484855 F8P00451 2351 aa12.31□□□□□ -0.44
CTSA-207ENST00000484855 GAS8-AS1O95177 125 aa12.3□□□□□ -0.44
CTSA-207ENST00000484855 STHQ8IWL8 128 aa12.3□□□□□ -0.44
CTSA-207ENST00000484855 DPH3P1Q9H4G8 78 aa12.3□□□□□ -0.44
CTSA-207ENST00000484855 LINC00482Q8N8I6 264 aa12.3□□□□□ -0.44
CTSA-207ENST00000484855 C9orf85Q96MD7 179 aa12.3□□□□□ -0.44
CTSA-207ENST00000484855 MAP1LC3AQ9H492 121 aa12.3□□□□□ -0.44
CTSA-207ENST00000484855 MDFICQ9P1T7 246 aa12.3□□□□□ -0.44
CTSA-207ENST00000484855 TRGV11A0A075B6L2 103 aa12.29□□□□□ -0.44
CTSA-207ENST00000484855 TRAV26-2A0A0B4J265 109 aa12.29□□□□□ -0.44
CTSA-207ENST00000484855 TNFRSF6BO95407 300 aa12.29□□□□□ -0.44
CTSA-207ENST00000484855 GATA1P15976 413 aaPredicted RBP12.29□□□□□ -0.44
CTSA-207ENST00000484855 S100A12P80511 92 aa12.29□□□□□ -0.44
CTSA-207ENST00000484855 C14orf178Q8N769 122 aaPredicted RBP12.29□□□□□ -0.44
CTSA-207ENST00000484855 CLUHP3Q96NS8 147 aa12.29□□□□□ -0.44
CTSA-207ENST00000484855 CBY3A6NI87 242 aa12.28□□□□□ -0.44
CTSA-207ENST00000484855 C3orf79P0CE67 100 aa12.28□□□□□ -0.44
CTSA-207ENST00000484855 CMC4P56277 68 aaPredicted RBP12.28□□□□□ -0.44
CTSA-207ENST00000484855 MRAP2Q96G30 205 aa12.28□□□□□ -0.44
CTSA-207ENST00000484855 GSN-AS1Q9NRJ2 163 aa12.28□□□□□ -0.44
CTSA-207ENST00000484855 NIPBLQ6KC79 2804 aaeCLIP12.27□□□□□ -0.44
CTSA-207ENST00000484855 INSP01308 110 aa12.27□□□□□ -0.45
CTSA-207ENST00000484855 LEPROTL1O95214 131 aa12.26□□□□□ -0.45
CTSA-207ENST00000484855 MGPP08493 103 aa12.26□□□□□ -0.45
CTSA-207ENST00000484855 TRPT1Q86TN4 253 aaKnown RBP12.26□□□□□ -0.45
CTSA-207ENST00000484855 SYT8Q8NBV8 401 aa12.26□□□□□ -0.45
CTSA-207ENST00000484855 SMIM17P0DL12 118 aa12.26□□□□□ -0.45
CTSA-207ENST00000484855 HTN1P15515 57 aa12.26□□□□□ -0.45
CTSA-207ENST00000484855 NRACQ8N912 160 aa12.26□□□□□ -0.45
CTSA-207ENST00000484855 BEAN1Q3B7T3 259 aa12.25□□□□□ -0.45
CTSA-207ENST00000484855 C20orf144Q9BQM9 153 aa12.25□□□□□ -0.45
CTSA-207ENST00000484855 FAM110AQ9BQ89 295 aa12.25□□□□□ -0.45
CTSA-207ENST00000484855 Q8N976 141 aa12.24□□□□□ -0.45
CTSA-207ENST00000484855 CITED1Q99966 193 aa12.24□□□□□ -0.45
CTSA-207ENST00000484855 NXT2Q9NPJ8 142 aaKnown RBP12.24□□□□□ -0.45
CTSA-207ENST00000484855 XCL2Q9UBD3 114 aa12.24□□□□□ -0.45
CTSA-207ENST00000484855 BTF3P20290 206 aaKnown RBP12.23□□□□□ -0.45
CTSA-207ENST00000484855 LINC01587Q99440 93 aa12.23□□□□□ -0.45
CTSA-207ENST00000484855 JPT2Q9H910 190 aa12.23□□□□□ -0.45
CTSA-207ENST00000484855 KIF25-AS1Q9Y6Z4 181 aa12.23□□□□□ -0.45
CTSA-207ENST00000484855 NUTF2P61970 127 aaKnown RBP12.23□□□□□ -0.45
CTSA-207ENST00000484855 LINC00173Q6ZV60 143 aa12.23□□□□□ -0.45
CTSA-207ENST00000484855 WFDC10AQ9H1F0 79 aa12.23□□□□□ -0.45
CTSA-207ENST00000484855 HSPB8Q9UJY1 196 aa12.23□□□□□ -0.45
CTSA-207ENST00000484855 POM121L12Q8N7R1 296 aa12.22□□□□□ -0.45
CTSA-207ENST00000484855 TMEM70Q9BUB7 260 aa12.22□□□□□ -0.45
CTSA-207ENST00000484855 BAHCC1Q9P281 2608 aa12.22□□□□□ -0.45
CTSA-207ENST00000484855 A0A087WWL8 130 aa12.22□□□□□ -0.45
CTSA-207ENST00000484855 TEX43Q6ZNM6 134 aa12.22□□□□□ -0.45
CTSA-207ENST00000484855 Q8N8P6 123 aa12.22□□□□□ -0.45
CTSA-207ENST00000484855 LINC00467Q9BRT7 94 aa12.22□□□□□ -0.45
CTSA-207ENST00000484855 C19orf73Q9NVV2 129 aa12.22□□□□□ -0.45
CTSA-207ENST00000484855 A0A096LNJ9 63 aa12.21□□□□□ -0.45
CTSA-207ENST00000484855 LINC01546A6NGU7 62 aa12.21□□□□□ -0.45
CTSA-207ENST00000484855 PRSS47A8MTI9 375 aa12.21□□□□□ -0.45
CTSA-207ENST00000484855 LINC00315P59091 139 aa12.21□□□□□ -0.45
CTSA-207ENST00000484855 ZNF415Q09FC8 603 aa12.21□□□□□ -0.45
CTSA-207ENST00000484855 ZNF876PQ49A33 203 aa12.21□□□□□ -0.45
CTSA-207ENST00000484855 RASL10AQ92737 203 aa12.21□□□□□ -0.45
CTSA-207ENST00000484855 HBDP02042 147 aa12.2□□□□□ -0.46
CTSA-207ENST00000484855 PRM2P04554 102 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms