RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 ICOSQ9Y6W8 199 aa12.46□□□□□ -0.41
HDAC6-225ENST00000483506 DNAH17Q9UFH2 4485 aa12.45□□□□□ -0.42
HDAC6-225ENST00000483506 RS1O15537 224 aa12.45□□□□□ -0.42
HDAC6-225ENST00000483506 TAGLN2P37802 199 aaKnown RBP12.45□□□□□ -0.42
HDAC6-225ENST00000483506 RPL35P42766 123 aaKnown RBP12.45□□□□□ -0.42
HDAC6-225ENST00000483506 NKX2-5P52952 324 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-225ENST00000483506 ESRGQ1W209 222 aa12.45□□□□□ -0.42
HDAC6-225ENST00000483506 ZNF506Q5JVG8 444 aa12.45□□□□□ -0.42
HDAC6-225ENST00000483506 BAGE2Q86Y30 109 aa12.45□□□□□ -0.42
HDAC6-225ENST00000483506 NHLRC2Q8NBF2 726 aa12.45□□□□□ -0.42
HDAC6-225ENST00000483506 HECTD4Q9Y4D8 3996 aa12.45□□□□□ -0.42
HDAC6-225ENST00000483506 FAT2Q9NYQ8 4349 aa12.44□□□□□ -0.42
HDAC6-225ENST00000483506 PGPEP1LA6NFU8 196 aa12.44□□□□□ -0.42
HDAC6-225ENST00000483506 C9JCJ5 164 aa12.44□□□□□ -0.42
HDAC6-225ENST00000483506 PDE6DO43924 150 aa12.44□□□□□ -0.42
HDAC6-225ENST00000483506 S100A4P26447 101 aaKnown RBP12.44□□□□□ -0.42
HDAC6-225ENST00000483506 CFAP126Q5VTH2 177 aa12.44□□□□□ -0.42
HDAC6-225ENST00000483506 ALKAL2Q6UX46 152 aa12.44□□□□□ -0.42
HDAC6-225ENST00000483506 LYPD6BQ8NI32 183 aa12.44□□□□□ -0.42
HDAC6-225ENST00000483506 MRPS16Q9Y3D3 137 aaKnown RBP12.44□□□□□ -0.42
HDAC6-225ENST00000483506 IGLV2-18A0A075B6J9 118 aa12.43□□□□□ -0.42
HDAC6-225ENST00000483506 M0R036 132 aa12.43□□□□□ -0.42
HDAC6-225ENST00000483506 GATA1P15976 413 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-225ENST00000483506 BLOC1S1P78537 153 aa12.43□□□□□ -0.42
HDAC6-225ENST00000483506 MRPL23Q16540 153 aaKnown RBP12.43□□□□□ -0.42
HDAC6-225ENST00000483506 DERL1Q9BUN8 251 aa12.43□□□□□ -0.42
HDAC6-225ENST00000483506 SCRT2Q9NQ03 307 aa12.43□□□□□ -0.42
HDAC6-225ENST00000483506 H3BVH4 76 aa12.42□□□□□ -0.42
HDAC6-225ENST00000483506 M0R2N4 97 aa12.42□□□□□ -0.42
HDAC6-225ENST00000483506 CXCL1P09341 107 aa12.42□□□□□ -0.42
HDAC6-225ENST00000483506 SMIM12Q96EX1 92 aa12.42□□□□□ -0.42
HDAC6-225ENST00000483506 VAX2Q9UIW0 290 aa12.42□□□□□ -0.42
HDAC6-225ENST00000483506 K7EQD1 137 aa12.41□□□□□ -0.42
HDAC6-225ENST00000483506 BOLA1Q9Y3E2 137 aa12.41□□□□□ -0.42
HDAC6-225ENST00000483506 BIRC6Q9NR09 4857 aa12.4□□□□□ -0.42
HDAC6-225ENST00000483506 NBDYA0A0U1RRE5 68 aa12.4□□□□□ -0.42
HDAC6-225ENST00000483506 A8MWV9 139 aa12.4□□□□□ -0.42
HDAC6-225ENST00000483506 ARMS2P0C7Q2 107 aa12.4□□□□□ -0.42
HDAC6-225ENST00000483506 MED14OSP0DP75 135 aa12.4□□□□□ -0.42
HDAC6-225ENST00000483506 CENPWQ5EE01 88 aa12.4□□□□□ -0.42
HDAC6-225ENST00000483506 ZFP2Q6ZN57 461 aa12.4□□□□□ -0.42
HDAC6-225ENST00000483506 LINC00336Q6ZUF6 198 aa12.4□□□□□ -0.42
HDAC6-225ENST00000483506 Q9H8V8 135 aa12.4□□□□□ -0.42
HDAC6-225ENST00000483506 TRBV6-4A0A1B0GX49 114 aa12.39□□□□□ -0.43
HDAC6-225ENST00000483506 GRIFINA4D1Z8 144 aa12.39□□□□□ -0.43
HDAC6-225ENST00000483506 IGLV2-8P01709 118 aa12.39□□□□□ -0.43
HDAC6-225ENST00000483506 GYPEP15421 78 aa12.39□□□□□ -0.43
HDAC6-225ENST00000483506 NEGR1Q7Z3B1 354 aa12.39□□□□□ -0.43
HDAC6-225ENST00000483506 PCNPQ8WW12 178 aaKnown RBP12.39□□□□□ -0.43
HDAC6-225ENST00000483506 PARLQ9H300 379 aa12.39□□□□□ -0.43
HDAC6-225ENST00000483506 RTL8CO15255 209 aa12.38□□□□□ -0.43
HDAC6-225ENST00000483506 SRIP30626 198 aa12.38□□□□□ -0.43
HDAC6-225ENST00000483506 DMRTA1Q5VZB9 504 aa12.38□□□□□ -0.43
HDAC6-225ENST00000483506 UFSP1Q6NVU6 142 aa12.38□□□□□ -0.43
HDAC6-225ENST00000483506 LYPD5Q6UWN5 251 aa12.38□□□□□ -0.43
HDAC6-225ENST00000483506 SLC25A29Q8N8R3 303 aa12.38□□□□□ -0.43
HDAC6-225ENST00000483506 SYT8Q8NBV8 401 aa12.38□□□□□ -0.43
HDAC6-225ENST00000483506 MED9Q9NWA0 146 aa12.38□□□□□ -0.43
HDAC6-225ENST00000483506 TRBV20OR9-2A0A075B6H5 130 aa12.37□□□□□ -0.43
HDAC6-225ENST00000483506 TMSB15BA0A087X1C1 80 aa12.37□□□□□ -0.43
HDAC6-225ENST00000483506 MGST1P10620 155 aaKnown RBP12.37□□□□□ -0.43
HDAC6-225ENST00000483506 SH2D6Q7Z4S9 175 aa12.37□□□□□ -0.43
HDAC6-225ENST00000483506 PHLDA3Q9Y5J5 127 aa12.37□□□□□ -0.43
HDAC6-225ENST00000483506 A0A1W2PPQ1 181 aa12.36□□□□□ -0.43
HDAC6-225ENST00000483506 RAB19A4D1S5 217 aa12.36□□□□□ -0.43
HDAC6-225ENST00000483506 NXPH4O95158 308 aa12.36□□□□□ -0.43
HDAC6-225ENST00000483506 GNG4P50150 75 aa12.36□□□□□ -0.43
HDAC6-225ENST00000483506 RPL19P84098 196 aaKnown RBP12.36□□□□□ -0.43
HDAC6-225ENST00000483506 RHOHQ15669 191 aa12.36□□□□□ -0.43
HDAC6-225ENST00000483506 PRR27Q6MZM9 219 aa12.36□□□□□ -0.43
HDAC6-225ENST00000483506 SSBP4Q9BWG4 385 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-225ENST00000483506 LOC100131303A0A0U1RQF7 123 aa12.35□□□□□ -0.43
HDAC6-225ENST00000483506 C19orf71A6NCJ1 209 aa12.35□□□□□ -0.43
HDAC6-225ENST00000483506 SNAI2O43623 268 aa12.35□□□□□ -0.43
HDAC6-225ENST00000483506 NDUFS6O75380 124 aaKnown RBP12.35□□□□□ -0.43
HDAC6-225ENST00000483506 TIRAPP58753 221 aa12.35□□□□□ -0.43
HDAC6-225ENST00000483506 TTC32Q5I0X7 151 aa12.35□□□□□ -0.43
HDAC6-225ENST00000483506 C1orf134Q5TEV5 83 aa12.35□□□□□ -0.43
HDAC6-225ENST00000483506 ZFP82Q8N141 532 aa12.35□□□□□ -0.43
HDAC6-225ENST00000483506 SFRP2Q96HF1 295 aa12.35□□□□□ -0.43
HDAC6-225ENST00000483506 PRADC1Q9BSG0 188 aa12.35□□□□□ -0.43
HDAC6-225ENST00000483506 IGHV3-73A0A0B4J1V6 119 aa12.34□□□□□ -0.43
HDAC6-225ENST00000483506 RBFOX3A6NFN3 312 aa12.34□□□□□ -0.43
HDAC6-225ENST00000483506 TMEM250H0YL14 139 aa12.34□□□□□ -0.43
HDAC6-225ENST00000483506 RHODO00212 210 aa12.34□□□□□ -0.43
HDAC6-225ENST00000483506 OR5AL1P0C617 328 aa12.34□□□□□ -0.43
HDAC6-225ENST00000483506 SOHLH1Q5JUK2 328 aa12.34□□□□□ -0.43
HDAC6-225ENST00000483506 KRTAP1-5Q9BYS1 174 aa12.34□□□□□ -0.43
HDAC6-225ENST00000483506 JPT2Q9H910 190 aa12.34□□□□□ -0.43
HDAC6-225ENST00000483506 BTF3P20290 206 aaKnown RBP12.33□□□□□ -0.44
HDAC6-225ENST00000483506 Q6ZSN1 163 aa12.33□□□□□ -0.44
HDAC6-225ENST00000483506 SAMD10Q9BYL1 202 aa12.33□□□□□ -0.44
HDAC6-225ENST00000483506 BIN3Q9NQY0 253 aa12.33□□□□□ -0.44
HDAC6-225ENST00000483506 SIVA1O15304 175 aa12.32□□□□□ -0.44
HDAC6-225ENST00000483506 LINC00694P0DN24 101 aa12.32□□□□□ -0.44
HDAC6-225ENST00000483506 A0A1B0GVY2 172 aa12.31□□□□□ -0.44
HDAC6-225ENST00000483506 M0R381 172 aa12.31□□□□□ -0.44
HDAC6-225ENST00000483506 CRYGDP07320 174 aa12.31□□□□□ -0.44
HDAC6-225ENST00000483506 RPS20P60866 119 aaKnown RBP12.31□□□□□ -0.44
HDAC6-225ENST00000483506 C6orf223Q8N319 242 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms