RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 C8orf76Q96K31 380 aa0.64□□□□□ -2.31
COPA-204ENST00000481522 HIST1H2BNQ99877 126 aa0.64□□□□□ -2.31
COPA-204ENST00000481522 HIST1H2BMQ99879 126 aa0.64□□□□□ -2.31
COPA-204ENST00000481522 NKIRAS1Q9NYS0 192 aa0.64□□□□□ -2.31
COPA-204ENST00000481522 ATP6V1DQ9Y5K8 247 aa0.64□□□□□ -2.31
COPA-204ENST00000481522 TRAV1-1A0A0B4J248 108 aa0.63□□□□□ -2.31
COPA-204ENST00000481522 DCTN3O75935 186 aa0.63□□□□□ -2.31
COPA-204ENST00000481522 CMPK1P30085 196 aa0.63□□□□□ -2.31
COPA-204ENST00000481522 CASQ1P31415 396 aa0.63□□□□□ -2.31
COPA-204ENST00000481522 TPM4P67936 248 aa0.63□□□□□ -2.31
COPA-204ENST00000481522 PMAIP1Q13794 54 aa0.63□□□□□ -2.31
COPA-204ENST00000481522 BRMS1LQ5PSV4 323 aa0.63□□□□□ -2.31
COPA-204ENST00000481522 DPPA3Q6W0C5 159 aa0.63□□□□□ -2.31
COPA-204ENST00000481522 Q6ZQT0 140 aa0.63□□□□□ -2.31
COPA-204ENST00000481522 BPIFA4PQ86YQ2 179 aa0.63□□□□□ -2.31
COPA-204ENST00000481522 C5orf56Q8N8D9 126 aa0.63□□□□□ -2.31
COPA-204ENST00000481522 OR4B1Q8NGF8 309 aa0.63□□□□□ -2.31
COPA-204ENST00000481522 PFN4Q8NHR9 129 aa0.63□□□□□ -2.31
COPA-204ENST00000481522 MRPL30Q8TCC3 161 aaKnown RBP0.63□□□□□ -2.31
COPA-204ENST00000481522 MALSU1Q96EH3 234 aa0.63□□□□□ -2.31
COPA-204ENST00000481522 LINC00526Q96FQ7 95 aa0.63□□□□□ -2.31
COPA-204ENST00000481522 GINS4Q9BRT9 223 aa0.63□□□□□ -2.31
COPA-204ENST00000481522 SLC50A1Q9BRV3 221 aa0.63□□□□□ -2.31
COPA-204ENST00000481522 TVP23BQ9NYZ1 205 aa0.63□□□□□ -2.31
COPA-204ENST00000481522 LOC110117498A0A087WWA1 95 aa0.62□□□□□ -2.31
COPA-204ENST00000481522 CETN3O15182 167 aa0.62□□□□□ -2.31
COPA-204ENST00000481522 MRPL33O75394 65 aaKnown RBP0.62□□□□□ -2.31
COPA-204ENST00000481522 CTSDP07339 412 aaPredicted RBP0.62□□□□□ -2.31
COPA-204ENST00000481522 OR5G3P0C626 314 aa0.62□□□□□ -2.31
COPA-204ENST00000481522 ASAH2BP0C7U1 165 aa0.62□□□□□ -2.31
COPA-204ENST00000481522 FKBP2P26885 142 aaKnown RBP0.62□□□□□ -2.31
COPA-204ENST00000481522 HBA1P69905 142 aa0.62□□□□□ -2.31
COPA-204ENST00000481522 SPANXN5Q5MJ07 72 aa0.62□□□□□ -2.31
COPA-204ENST00000481522 HIST2H3PS2Q5TEC6 136 aa0.62□□□□□ -2.31
COPA-204ENST00000481522 KLK9Q9UKQ9 250 aa0.62□□□□□ -2.31
COPA-204ENST00000481522 IGKV1D-42A0A075B6H8 117 aa0.61□□□□□ -2.31
COPA-204ENST00000481522 M0R1W7 72 aa0.61□□□□□ -2.31
COPA-204ENST00000481522 HYPMO75409 117 aa0.61□□□□□ -2.31
COPA-204ENST00000481522 SPART-AS1P0CW21 52 aa0.61□□□□□ -2.31
COPA-204ENST00000481522 SPI1P17947 270 aa0.61□□□□□ -2.31
COPA-204ENST00000481522 ZNF93P35789 620 aaPredicted RBP0.61□□□□□ -2.31
COPA-204ENST00000481522 KCNJ8Q15842 424 aa0.61□□□□□ -2.31
COPA-204ENST00000481522 LINC00311Q8N616 119 aa0.61□□□□□ -2.31
COPA-204ENST00000481522 OR13C4Q8NGS5 318 aa0.61□□□□□ -2.31
COPA-204ENST00000481522 OBSCN-AS1Q96MR7 158 aa0.61□□□□□ -2.31
COPA-204ENST00000481522 LLPHQ9BRT6 129 aaKnown RBP0.61□□□□□ -2.31
COPA-204ENST00000481522 G3V318 75 aa0.6□□□□□ -2.31
COPA-204ENST00000481522 PITX3O75364 302 aa0.6□□□□□ -2.31
COPA-204ENST00000481522 IGKV1-5P01602 117 aa0.6□□□□□ -2.31
COPA-204ENST00000481522 GYPAP02724 150 aa0.6□□□□□ -2.31
COPA-204ENST00000481522 UBE2D1P51668 147 aa0.6□□□□□ -2.31
COPA-204ENST00000481522 RAB4BP61018 213 aa0.6□□□□□ -2.31
COPA-204ENST00000481522 PDE6HQ13956 83 aa0.6□□□□□ -2.31
COPA-204ENST00000481522 Q5VV11 94 aa0.6□□□□□ -2.31
COPA-204ENST00000481522 CLVS1Q8IUQ0 354 aaPredicted RBP0.6□□□□□ -2.31
COPA-204ENST00000481522 C20orf196Q8IYI0 205 aa0.6□□□□□ -2.31
COPA-204ENST00000481522 DYNLRB2Q8TF09 96 aa0.6□□□□□ -2.31
COPA-204ENST00000481522 DNAJC9Q8WXX5 260 aa0.6□□□□□ -2.31
COPA-204ENST00000481522 SLC35B4Q969S0 331 aa0.6□□□□□ -2.31
COPA-204ENST00000481522 PRAP1Q96NZ9 151 aa0.6□□□□□ -2.31
COPA-204ENST00000481522 WFDC6Q9BQY6 131 aa0.6□□□□□ -2.31
COPA-204ENST00000481522 ZFP30Q9Y2G7 519 aa0.6□□□□□ -2.31
COPA-204ENST00000481522 C2orf70A6NJV1 201 aa0.59□□□□□ -2.31
COPA-204ENST00000481522 M0QZK8 103 aa0.59□□□□□ -2.31
COPA-204ENST00000481522 OR1I1O60431 355 aa0.59□□□□□ -2.31
COPA-204ENST00000481522 IGLV3-1P01715 115 aa0.59□□□□□ -2.31
COPA-204ENST00000481522 CALB1P05937 261 aa0.59□□□□□ -2.31
COPA-204ENST00000481522 HIST3H3Q16695 136 aa0.59□□□□□ -2.31
COPA-204ENST00000481522 KHDC3LQ587J8 217 aa0.59□□□□□ -2.31
COPA-204ENST00000481522 LPCAT3Q6P1A2 487 aa0.59□□□□□ -2.31
COPA-204ENST00000481522 MIR17HGQ75NE6 70 aa0.59□□□□□ -2.31
COPA-204ENST00000481522 OR5A1Q8NGJ0 315 aa0.59□□□□□ -2.31
COPA-204ENST00000481522 PTH2Q96A98 100 aa0.59□□□□□ -2.31
COPA-204ENST00000481522 OR52E6Q96RD3 313 aa0.59□□□□□ -2.31
COPA-204ENST00000481522 MRPS26Q9BYN8 205 aaKnown RBP0.59□□□□□ -2.31
COPA-204ENST00000481522 COMMD5Q9GZQ3 224 aa0.59□□□□□ -2.31
COPA-204ENST00000481522 MIXL1Q9H2W2 232 aa0.59□□□□□ -2.31
COPA-204ENST00000481522 CMTM6Q9NX76 183 aa0.59□□□□□ -2.31
COPA-204ENST00000481522 TCL1BO95988 128 aa0.58□□□□□ -2.32
COPA-204ENST00000481522 HLA-DRB1P01911 266 aa0.58□□□□□ -2.32
COPA-204ENST00000481522 MAGOHP61326 146 aaKnown RBP0.58□□□□□ -2.32
COPA-204ENST00000481522 RHEBQ15382 184 aa0.58□□□□□ -2.32
COPA-204ENST00000481522 ZNF720Q7Z2F6 126 aa0.58□□□□□ -2.32
COPA-204ENST00000481522 FAM216BQ8N7L0 139 aa0.58□□□□□ -2.32
COPA-204ENST00000481522 TERB2Q8NHR7 220 aa0.58□□□□□ -2.32
COPA-204ENST00000481522 H1FXQ92522 213 aaKnown RBP0.58□□□□□ -2.32
COPA-204ENST00000481522 TMEM147Q9BVK8 224 aa0.58□□□□□ -2.32
COPA-204ENST00000481522 PARVGQ9HBI0 331 aa0.58□□□□□ -2.32
COPA-204ENST00000481522 ACER3Q9NUN7 267 aa0.58□□□□□ -2.32
COPA-204ENST00000481522 OR2T1O43869 369 aa0.57□□□□□ -2.32
COPA-204ENST00000481522 UBL3O95164 117 aa0.57□□□□□ -2.32
COPA-204ENST00000481522 BAALC-AS2P0C853 105 aa0.57□□□□□ -2.32
COPA-204ENST00000481522 CD79AP11912 226 aa0.57□□□□□ -2.32
COPA-204ENST00000481522 OGNP20774 298 aaKnown RBP0.57□□□□□ -2.32
COPA-204ENST00000481522 SPCS3P61009 180 aa0.57□□□□□ -2.32
COPA-204ENST00000481522 PSME3P61289 254 aa0.57□□□□□ -2.32
COPA-204ENST00000481522 COTL1Q14019 142 aa0.57□□□□□ -2.32
COPA-204ENST00000481522 TOMM6Q96B49 74 aa0.57□□□□□ -2.32
COPA-204ENST00000481522 IMP4Q96G21 291 aaKnown RBP0.57□□□□□ -2.32
COPA-204ENST00000481522 NIPSNAP1Q9BPW8 284 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms