RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 TMEM89A2RUT3 159 aa9.11□□□□□ -0.95
TRIM27-205ENST00000481474 LRP5O75197 1615 aa9.11□□□□□ -0.95
TRIM27-205ENST00000481474 C5orf63A6NC05 138 aa9.11□□□□□ -0.95
TRIM27-205ENST00000481474 NUPR2A6NF83 97 aa9.11□□□□□ -0.95
TRIM27-205ENST00000481474 PSMB8P28062 276 aa9.1□□□□□ -0.95
TRIM27-205ENST00000481474 K7EM74 188 aa9.1□□□□□ -0.95
TRIM27-205ENST00000481474 IFI6P09912 130 aa9.1□□□□□ -0.95
TRIM27-205ENST00000481474 SND1-IT1Q9HBX3 110 aa9.1□□□□□ -0.95
TRIM27-205ENST00000481474 ARFGEF1Q9Y6D6 1849 aa9.1□□□□□ -0.95
TRIM27-205ENST00000481474 DCANP1Q8TF63 244 aa9.1□□□□□ -0.95
TRIM27-205ENST00000481474 QSER1Q2KHR3 1735 aa9.1□□□□□ -0.95
TRIM27-205ENST00000481474 RBAKDNA6NC62 111 aa9.1□□□□□ -0.95
TRIM27-205ENST00000481474 RNF126Q9BV68 326 aa9.09□□□□□ -0.95
TRIM27-205ENST00000481474 WNK3Q9BYP7 1800 aa9.09□□□□□ -0.95
TRIM27-205ENST00000481474 A0A1B0GTI1 187 aa9.09□□□□□ -0.95
TRIM27-205ENST00000481474 NCOA6Q14686 2063 aaPredicted RBP9.09□□□□□ -0.95
TRIM27-205ENST00000481474 MRPL51Q4U2R6 128 aaKnown RBP9.09□□□□□ -0.95
TRIM27-205ENST00000481474 CTHRC1Q96CG8 243 aa9.09□□□□□ -0.95
TRIM27-205ENST00000481474 MRPS18CQ9Y3D5 142 aaKnown RBP9.09□□□□□ -0.95
TRIM27-205ENST00000481474 MAST2Q6P0Q8 1798 aa9.09□□□□□ -0.95
TRIM27-205ENST00000481474 FAM236AA0A1B0GUQ0 79 aa9.09□□□□□ -0.95
TRIM27-205ENST00000481474 FAM236BA0A1B0GV22 79 aa9.09□□□□□ -0.95
TRIM27-205ENST00000481474 SH2D6Q7Z4S9 175 aa9.09□□□□□ -0.95
TRIM27-205ENST00000481474 SHANK2-AS3Q9BTD1 123 aa9.09□□□□□ -0.95
TRIM27-205ENST00000481474 MYLKQ15746 1914 aa9.08□□□□□ -0.96
TRIM27-205ENST00000481474 Q86TA4 180 aa9.08□□□□□ -0.96
TRIM27-205ENST00000481474 RPL39LQ96EH5 51 aaKnown RBP9.08□□□□□ -0.96
TRIM27-205ENST00000481474 OPRPNQ99935 248 aaPredicted RBP9.08□□□□□ -0.96
TRIM27-205ENST00000481474 TMEM61Q8N0U2 210 aa9.08□□□□□ -0.96
TRIM27-205ENST00000481474 PTPN13Q12923 2485 aa9.08□□□□□ -0.96
TRIM27-205ENST00000481474 IGKV2-28A0A075B6P5 120 aa9.08□□□□□ -0.96
TRIM27-205ENST00000481474 IGKV2D-28P01615 120 aa9.08□□□□□ -0.96
TRIM27-205ENST00000481474 VWCEQ96DN2 955 aa9.08□□□□□ -0.96
TRIM27-205ENST00000481474 XAGE1AQ9HD64 81 aa9.08□□□□□ -0.96
TRIM27-205ENST00000481474 GLI3P10071 1580 aa9.08□□□□□ -0.96
TRIM27-205ENST00000481474 FAM208BQ5VWN6 2430 aa9.08□□□□□ -0.96
TRIM27-205ENST00000481474 LOXP28300 417 aaPredicted RBP9.08□□□□□ -0.96
TRIM27-205ENST00000481474 IGHV2-70P01814 119 aa9.07□□□□□ -0.96
TRIM27-205ENST00000481474 SCN10AQ9Y5Y9 1956 aa9.07□□□□□ -0.96
TRIM27-205ENST00000481474 KDM3BQ7LBC6 1761 aa9.07□□□□□ -0.96
TRIM27-205ENST00000481474 TRBV12-3P01733 135 aa9.07□□□□□ -0.96
TRIM27-205ENST00000481474 FOXI2Q6ZQN5 318 aa9.07□□□□□ -0.96
TRIM27-205ENST00000481474 DIRC1Q969H9 104 aa9.07□□□□□ -0.96
TRIM27-205ENST00000481474 A0A087WWC5 75 aa9.07□□□□□ -0.96
TRIM27-205ENST00000481474 LINC00269Q8N2A0 174 aa9.07□□□□□ -0.96
TRIM27-205ENST00000481474 K7EP13 123 aa9.07□□□□□ -0.96
TRIM27-205ENST00000481474 RPL37AP8A6NKH3 93 aa9.07□□□□□ -0.96
TRIM27-205ENST00000481474 LOXL1Q08397 574 aaPredicted RBP9.06□□□□□ -0.96
TRIM27-205ENST00000481474 LINC00526Q96FQ7 95 aa9.06□□□□□ -0.96
TRIM27-205ENST00000481474 CCL25O15444 150 aa9.06□□□□□ -0.96
TRIM27-205ENST00000481474 C14orf177Q52M58 125 aa9.06□□□□□ -0.96
TRIM27-205ENST00000481474 CEND1Q8N111 149 aa9.06□□□□□ -0.96
TRIM27-205ENST00000481474 SERP2Q8N6R1 65 aa9.06□□□□□ -0.96
TRIM27-205ENST00000481474 C2orf16Q68DN1 1984 aa9.06□□□□□ -0.96
TRIM27-205ENST00000481474 RREB1Q92766 1687 aa9.06□□□□□ -0.96
TRIM27-205ENST00000481474 LINC00271P0C7V0 271 aa9.06□□□□□ -0.96
TRIM27-205ENST00000481474 MRPL35Q9NZE8 188 aaKnown RBP9.06□□□□□ -0.96
TRIM27-205ENST00000481474 GOLGB1Q14789 3259 aaKnown RBP9.06□□□□□ -0.96
TRIM27-205ENST00000481474 J3QQQ9 107 aa9.06□□□□□ -0.96
TRIM27-205ENST00000481474 BVES-AS1Q5T3Y7 98 aa9.06□□□□□ -0.96
TRIM27-205ENST00000481474 C9orf118A6NHY6 69 aa9.05□□□□□ -0.96
TRIM27-205ENST00000481474 LYPD3O95274 346 aa9.05□□□□□ -0.96
TRIM27-205ENST00000481474 CARHSP1Q9Y2V2 147 aaKnown RBP9.05□□□□□ -0.96
TRIM27-205ENST00000481474 DNAJC9-AS1A6NH13 148 aa9.05□□□□□ -0.96
TRIM27-205ENST00000481474 ADAMTS9Q9P2N4 1935 aa9.05□□□□□ -0.96
TRIM27-205ENST00000481474 TRAV23DV6A0A075B6W5 121 aa9.05□□□□□ -0.96
TRIM27-205ENST00000481474 CCDC168Q8NDH2 2452 aa9.05□□□□□ -0.96
TRIM27-205ENST00000481474 CFPP27918 469 aa9.05□□□□□ -0.96
TRIM27-205ENST00000481474 TUBGCP6Q96RT7 1819 aa9.05□□□□□ -0.96
TRIM27-205ENST00000481474 LGALS9O00182 355 aa9.05□□□□□ -0.96
TRIM27-205ENST00000481474 CT83Q5H943 113 aa9.05□□□□□ -0.96
TRIM27-205ENST00000481474 TNRC6CQ9HCJ0 1690 aaKnown RBP9.04□□□□□ -0.96
TRIM27-205ENST00000481474 PLXNB1O43157 2135 aa9.04□□□□□ -0.96
TRIM27-205ENST00000481474 TICRRQ7Z2Z1 1910 aa9.04□□□□□ -0.96
TRIM27-205ENST00000481474 PRO1854Q9UHT4 67 aa9.04□□□□□ -0.96
TRIM27-205ENST00000481474 TET2Q6N021 2002 aaPredicted RBP9.04□□□□□ -0.96
TRIM27-205ENST00000481474 PLA2G2EQ9NZK7 142 aa9.04□□□□□ -0.96
TRIM27-205ENST00000481474 FBLN5Q9UBX5 448 aa9.04□□□□□ -0.96
TRIM27-205ENST00000481474 POLR3KQ9Y2Y1 108 aaPredicted RBP9.04□□□□□ -0.96
TRIM27-205ENST00000481474 MARF1Q9Y4F3 1742 aaKnown RBP9.04□□□□□ -0.96
TRIM27-205ENST00000481474 WI2-2373I1.2A0A1W2PRP0 233 aa9.04□□□□□ -0.96
TRIM27-205ENST00000481474 TMEM263Q8WUH6 116 aaKnown RBP9.04□□□□□ -0.96
TRIM27-205ENST00000481474 FAM30AQ9NZY2 134 aa9.04□□□□□ -0.96
TRIM27-205ENST00000481474 TRBV19A0A075B6N1 114 aa9.03□□□□□ -0.96
TRIM27-205ENST00000481474 IGHV2-5P01817 119 aa9.03□□□□□ -0.96
TRIM27-205ENST00000481474 RNF5Q99942 180 aa9.03□□□□□ -0.96
TRIM27-205ENST00000481474 LHFPL1Q86WI0 220 aa9.03□□□□□ -0.96
TRIM27-205ENST00000481474 ODF3L1Q8IXM7 274 aa9.03□□□□□ -0.96
TRIM27-205ENST00000481474 PYGO2Q9BRQ0 406 aa9.03□□□□□ -0.96
TRIM27-205ENST00000481474 PRR15LQ9BU68 103 aa9.03□□□□□ -0.96
TRIM27-205ENST00000481474 WDR83OSQ9Y284 106 aa9.03□□□□□ -0.96
TRIM27-205ENST00000481474 ABCA2Q9BZC7 2435 aa9.03□□□□□ -0.96
TRIM27-205ENST00000481474 STRCP1A6NGW2 1772 aa9.03□□□□□ -0.96
TRIM27-205ENST00000481474 STRCQ7RTU9 1775 aa9.03□□□□□ -0.96
TRIM27-205ENST00000481474 RNF222A6NCQ9 220 aa9.03□□□□□ -0.96
TRIM27-205ENST00000481474 C3orf84H3BNL1 204 aa9.03□□□□□ -0.96
TRIM27-205ENST00000481474 IGLC2P0DOY2 106 aa9.03□□□□□ -0.96
TRIM27-205ENST00000481474 IGLC3P0DOY3 106 aa9.03□□□□□ -0.96
TRIM27-205ENST00000481474 POM121L12Q8N7R1 296 aa9.03□□□□□ -0.96
TRIM27-205ENST00000481474 C1orf158Q8N1D5 194 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms