RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 HMGB3O15347 200 aaKnown RBP6.2□□□□□ -1.42
SMARCE1-210ENST00000481231 CIDEAO60543 219 aa6.2□□□□□ -1.42
SMARCE1-210ENST00000481231 GAS8-AS1O95177 125 aa6.2□□□□□ -1.42
SMARCE1-210ENST00000481231 MPC2O95563 127 aa6.2□□□□□ -1.42
SMARCE1-210ENST00000481231 LINC00694P0DN24 101 aa6.2□□□□□ -1.42
SMARCE1-210ENST00000481231 MGST1P10620 155 aaKnown RBP6.2□□□□□ -1.42
SMARCE1-210ENST00000481231 ACOT6Q3I5F7 207 aaPredicted RBP6.2□□□□□ -1.42
SMARCE1-210ENST00000481231 TMEM75Q8N9X5 138 aa6.2□□□□□ -1.42
SMARCE1-210ENST00000481231 NDFIP1Q9BT67 221 aa6.2□□□□□ -1.42
SMARCE1-210ENST00000481231 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.19□□□□□ -1.42
SMARCE1-210ENST00000481231 TRAV8-3A0A0A6YYJ7 113 aa6.19□□□□□ -1.42
SMARCE1-210ENST00000481231 A0A1W2PPV4 95 aa6.19□□□□□ -1.42
SMARCE1-210ENST00000481231 PGPEP1LA6NFU8 196 aa6.19□□□□□ -1.42
SMARCE1-210ENST00000481231 GCGP01275 180 aa6.19□□□□□ -1.42
SMARCE1-210ENST00000481231 ARL14EPLP0DKL9 152 aa6.19□□□□□ -1.42
SMARCE1-210ENST00000481231 RNASE3P12724 160 aaKnown RBP6.19□□□□□ -1.42
SMARCE1-210ENST00000481231 RPL12P30050 165 aaKnown RBP6.19□□□□□ -1.42
SMARCE1-210ENST00000481231 LINC01620Q4KN68 170 aa6.19□□□□□ -1.42
SMARCE1-210ENST00000481231 DAZ4Q86SG3 579 aaKnown RBP6.19□□□□□ -1.42
SMARCE1-210ENST00000481231 PTH2Q96A98 100 aa6.19□□□□□ -1.42
SMARCE1-210ENST00000481231 DAZ3Q9NR90 486 aaKnown RBP6.19□□□□□ -1.42
SMARCE1-210ENST00000481231 SERTM2A0A1B0GWG4 89 aa6.18□□□□□ -1.42
SMARCE1-210ENST00000481231 GAGE12JA6NER3 117 aa6.18□□□□□ -1.42
SMARCE1-210ENST00000481231 INMT-MINDY4F8WBC2 141 aa6.18□□□□□ -1.42
SMARCE1-210ENST00000481231 TAAR5O14804 337 aa6.18□□□□□ -1.42
SMARCE1-210ENST00000481231 IGLV2-11P01706 119 aa6.18□□□□□ -1.42
SMARCE1-210ENST00000481231 TCRAP04437 139 aa6.18□□□□□ -1.42
SMARCE1-210ENST00000481231 PET100P0DJ07 73 aa6.18□□□□□ -1.42
SMARCE1-210ENST00000481231 GAGE1Q13065 139 aa6.18□□□□□ -1.42
SMARCE1-210ENST00000481231 GAGE4Q13068 117 aa6.18□□□□□ -1.42
SMARCE1-210ENST00000481231 GAGE5Q13069 117 aa6.18□□□□□ -1.42
SMARCE1-210ENST00000481231 GAGE13Q4V321 117 aa6.18□□□□□ -1.42
SMARCE1-210ENST00000481231 C5orf17Q8NAS9 161 aa6.18□□□□□ -1.42
SMARCE1-210ENST00000481231 OR10G9Q8NGN4 311 aa6.18□□□□□ -1.42
SMARCE1-210ENST00000481231 OR10G7Q8NGN6 311 aa6.18□□□□□ -1.42
SMARCE1-210ENST00000481231 BAALCQ8WXS3 180 aa6.18□□□□□ -1.42
SMARCE1-210ENST00000481231 PARLQ9H300 379 aa6.18□□□□□ -1.42
SMARCE1-210ENST00000481231 NDUFA13Q9P0J0 144 aa6.18□□□□□ -1.42
SMARCE1-210ENST00000481231 Q9UF83 564 aa6.18□□□□□ -1.42
SMARCE1-210ENST00000481231 PSG8Q9UQ74 426 aa6.18□□□□□ -1.42
SMARCE1-210ENST00000481231 GGTLC3B5MD39 225 aa6.17□□□□□ -1.42
SMARCE1-210ENST00000481231 SSNA1O43805 119 aa6.17□□□□□ -1.42
SMARCE1-210ENST00000481231 UPK1BO75841 260 aa6.17□□□□□ -1.42
SMARCE1-210ENST00000481231 SMUG1Q53HV7 270 aa6.17□□□□□ -1.42
SMARCE1-210ENST00000481231 ZFP2Q6ZN57 461 aa6.17□□□□□ -1.42
SMARCE1-210ENST00000481231 LINC00299Q6ZSB3 139 aa6.17□□□□□ -1.42
SMARCE1-210ENST00000481231 PRNTQ86SH4 94 aa6.17□□□□□ -1.42
SMARCE1-210ENST00000481231 DNAJC30Q96LL9 226 aa6.17□□□□□ -1.42
SMARCE1-210ENST00000481231 A0A087WWC5 75 aa6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 RBFOX3A6NFN3 312 aa6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 A8MWV9 139 aa6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 K7EQM0 130 aa6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 IGLV2-8P01709 118 aa6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 STAG3L2P0CL84 134 aa6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 STAG3L3P0CL85 134 aa6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 GCHFRP30047 84 aa6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 CDC34P49427 236 aaPredicted RBP6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 FLI1Q01543 452 aaPredicted RBP6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 IFITM3Q01628 133 aa6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 ODF1Q14990 250 aa6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 ZFP69Q49AA0 526 aa6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 TOR2AQ5JU69 321 aa6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 UFSP1Q6NVU6 142 aa6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 C14orf178Q8N769 122 aaPredicted RBP6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 OR2T35Q8NGX2 323 aa6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 SUN5Q8TC36 379 aa6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 S100ZQ8WXG8 99 aa6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 RAB24Q969Q5 203 aa6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 DAZAP1Q96EP5 407 aaKnown RBP6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 LINC00479Q96M42 142 aa6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 MARVELD1Q9BSK0 173 aa6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 CHAC1Q9BUX1 264 aa6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 SAMD10Q9BYL1 202 aa6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 SH3BGRL3Q9H299 93 aa6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 JPT2Q9H910 190 aa6.16□□□□□ -1.42
SMARCE1-210ENST00000481231 IGKV3D-20A0A0C4DH25 116 aa6.15□□□□□ -1.42
SMARCE1-210ENST00000481231 SUMO1P63165 101 aaKnown RBP6.15□□□□□ -1.42
SMARCE1-210ENST00000481231 LGALSLQ3ZCW2 172 aaPredicted RBP6.15□□□□□ -1.42
SMARCE1-210ENST00000481231 PIK3CD-AS1Q5SR53 167 aa6.15□□□□□ -1.42
SMARCE1-210ENST00000481231 NIT1Q86X76 327 aa6.15□□□□□ -1.42
SMARCE1-210ENST00000481231 CYB561D1Q8N8Q1 229 aa6.15□□□□□ -1.42
SMARCE1-210ENST00000481231 Q8N976 141 aa6.15□□□□□ -1.42
SMARCE1-210ENST00000481231 OR2G3Q8NGZ4 309 aa6.15□□□□□ -1.42
SMARCE1-210ENST00000481231 CIRBP-AS1Q8TBR5 109 aa6.15□□□□□ -1.42
SMARCE1-210ENST00000481231 RMI2Q96E14 147 aa6.15□□□□□ -1.42
SMARCE1-210ENST00000481231 EPDR1Q9UM22 224 aa6.15□□□□□ -1.42
SMARCE1-210ENST00000481231 COX11Q9Y6N1 276 aa6.15□□□□□ -1.42
SMARCE1-210ENST00000481231 IGKV2D-24A0A075B6R9 120 aa6.14□□□□□ -1.43
SMARCE1-210ENST00000481231 RNF222A6NCQ9 220 aa6.14□□□□□ -1.43
SMARCE1-210ENST00000481231 S100A4P26447 101 aaKnown RBP6.14□□□□□ -1.43
SMARCE1-210ENST00000481231 RPL37AP61513 92 aaKnown RBP6.14□□□□□ -1.43
SMARCE1-210ENST00000481231 SAPCD1Q5SSQ6 148 aa6.14□□□□□ -1.43
SMARCE1-210ENST00000481231 HSD17B11Q8NBQ5 300 aa6.14□□□□□ -1.43
SMARCE1-210ENST00000481231 KLK12Q9UKR0 248 aa6.14□□□□□ -1.43
SMARCE1-210ENST00000481231 TRAV34A0A0B4J273 112 aa6.13□□□□□ -1.43
SMARCE1-210ENST00000481231 H3BVH4 76 aa6.13□□□□□ -1.43
SMARCE1-210ENST00000481231 FGF8P55075 233 aaPredicted RBP6.13□□□□□ -1.43
SMARCE1-210ENST00000481231 UBE2WQ96B02 151 aa6.13□□□□□ -1.43
SMARCE1-210ENST00000481231 TMEM167BQ9NRX6 74 aa6.13□□□□□ -1.43
SMARCE1-210ENST00000481231 IL36BQ9NZH7 164 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms