RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 HSPG2P98160 4391 aa6.41□□□□□ -1.38
VCP-206ENST00000480327 TEX48A0A1B0GUV7 120 aa6.41□□□□□ -1.38
VCP-206ENST00000480327 A0A1B0GVY2 172 aa6.41□□□□□ -1.38
VCP-206ENST00000480327 KRBOX1C9JBD0 128 aa6.41□□□□□ -1.38
VCP-206ENST00000480327 K7EN84 100 aa6.41□□□□□ -1.38
VCP-206ENST00000480327 S100A4P26447 101 aaKnown RBP6.41□□□□□ -1.38
VCP-206ENST00000480327 DAZ2Q13117 558 aaKnown RBP6.41□□□□□ -1.38
VCP-206ENST00000480327 IBA57Q5T440 356 aaKnown RBP6.41□□□□□ -1.38
VCP-206ENST00000480327 DAZAP1Q96EP5 407 aaKnown RBP6.41□□□□□ -1.38
VCP-206ENST00000480327 TRGV2A0A075B6R0 118 aa6.4□□□□□ -1.38
VCP-206ENST00000480327 C9JCJ5 164 aa6.4□□□□□ -1.38
VCP-206ENST00000480327 H3BVH4 76 aa6.4□□□□□ -1.38
VCP-206ENST00000480327 SPINK4O60575 86 aa6.4□□□□□ -1.38
VCP-206ENST00000480327 ASIPP42127 132 aa6.4□□□□□ -1.38
VCP-206ENST00000480327 LINC01559Q495D7 138 aa6.4□□□□□ -1.38
VCP-206ENST00000480327 RNASE7Q9H1E1 156 aaKnown RBP6.4□□□□□ -1.38
VCP-206ENST00000480327 DEFB131BA0A096LNP1 70 aa6.39□□□□□ -1.39
VCP-206ENST00000480327 TRAV10A0A0B4J240 114 aa6.39□□□□□ -1.39
VCP-206ENST00000480327 C19orf71A6NCJ1 209 aa6.39□□□□□ -1.39
VCP-206ENST00000480327 F5H768 121 aa6.39□□□□□ -1.39
VCP-206ENST00000480327 NDUFS6O75380 124 aaKnown RBP6.39□□□□□ -1.39
VCP-206ENST00000480327 IGHV3-53P01767 116 aa6.39□□□□□ -1.39
VCP-206ENST00000480327 ARMS2P0C7Q2 107 aa6.39□□□□□ -1.39
VCP-206ENST00000480327 GZMBP10144 247 aa6.39□□□□□ -1.39
VCP-206ENST00000480327 RNASE3P12724 160 aaKnown RBP6.39□□□□□ -1.39
VCP-206ENST00000480327 SSTP61278 116 aa6.39□□□□□ -1.39
VCP-206ENST00000480327 ZNF575Q86XF7 245 aa6.39□□□□□ -1.39
VCP-206ENST00000480327 NUDT10Q8NFP7 164 aa6.39□□□□□ -1.39
VCP-206ENST00000480327 OR2D3Q8NGH3 330 aa6.39□□□□□ -1.39
VCP-206ENST00000480327 SMIM12Q96EX1 92 aa6.39□□□□□ -1.39
VCP-206ENST00000480327 NUDT11Q96G61 164 aa6.39□□□□□ -1.39
VCP-206ENST00000480327 SPXQ9BT56 116 aa6.39□□□□□ -1.39
VCP-206ENST00000480327 BIN3Q9NQY0 253 aa6.39□□□□□ -1.39
VCP-206ENST00000480327 MUC21A0A0G2JKD1 596 aa6.38□□□□□ -1.39
VCP-206ENST00000480327 MUC21A0A140T8X8 626 aa6.38□□□□□ -1.39
VCP-206ENST00000480327 IGLL5B9A064 214 aa6.38□□□□□ -1.39
VCP-206ENST00000480327 M0R2P5 195 aa6.38□□□□□ -1.39
VCP-206ENST00000480327 P01737 135 aa6.38□□□□□ -1.39
VCP-206ENST00000480327 ATP5G1P05496 136 aa6.38□□□□□ -1.39
VCP-206ENST00000480327 SFTA3P0C7M3 94 aa6.38□□□□□ -1.39
VCP-206ENST00000480327 TMEM241Q24JQ0 296 aa6.38□□□□□ -1.39
VCP-206ENST00000480327 ZNF876PQ49A33 203 aa6.38□□□□□ -1.39
VCP-206ENST00000480327 SOHLH1Q5JUK2 328 aa6.38□□□□□ -1.39
VCP-206ENST00000480327 LINC01551Q86U37 167 aa6.38□□□□□ -1.39
VCP-206ENST00000480327 COMMD7Q86VX2 200 aa6.38□□□□□ -1.39
VCP-206ENST00000480327 LINC00612Q8N6U2 182 aa6.38□□□□□ -1.39
VCP-206ENST00000480327 C9orf85Q96MD7 179 aa6.38□□□□□ -1.39
VCP-206ENST00000480327 TPPP3Q9BW30 176 aa6.38□□□□□ -1.39
VCP-206ENST00000480327 SMDT1Q9H4I9 107 aa6.38□□□□□ -1.39
VCP-206ENST00000480327 ERVFC1-1P60608 527 aa6.37□□□□□ -1.39
VCP-206ENST00000480327 ADIRFQ15847 76 aa6.37□□□□□ -1.39
VCP-206ENST00000480327 LGALS9BQ3B8N2 356 aa6.37□□□□□ -1.39
VCP-206ENST00000480327 FAM74A3Q4VXF1 159 aa6.37□□□□□ -1.39
VCP-206ENST00000480327 IL36BQ9NZH7 164 aa6.37□□□□□ -1.39
VCP-206ENST00000480327 NAT8Q9UHE5 227 aa6.37□□□□□ -1.39
VCP-206ENST00000480327 NACAE9PAV3 2078 aa6.37□□□□□ -1.39
VCP-206ENST00000480327 LRP1BQ9NZR2 4599 aa6.37□□□□□ -1.39
VCP-206ENST00000480327 IGHV3-73A0A0B4J1V6 119 aa6.36□□□□□ -1.39
VCP-206ENST00000480327 M0R381 172 aa6.36□□□□□ -1.39
VCP-206ENST00000480327 GATCO43716 136 aaKnown RBP6.36□□□□□ -1.39
VCP-206ENST00000480327 HOXA5P20719 270 aa6.36□□□□□ -1.39
VCP-206ENST00000480327 TCTAP57738 103 aa6.36□□□□□ -1.39
VCP-206ENST00000480327 RPL23P62829 140 aaKnown RBP6.36□□□□□ -1.39
VCP-206ENST00000480327 DNLZQ5SXM8 178 aa6.36□□□□□ -1.39
VCP-206ENST00000480327 DMRTA1Q5VZB9 504 aa6.36□□□□□ -1.39
VCP-206ENST00000480327 RASL10AQ92737 203 aa6.36□□□□□ -1.39
VCP-206ENST00000480327 ZNF479Q96JC4 524 aa6.36□□□□□ -1.39
VCP-206ENST00000480327 RPP21Q9H633 154 aaKnown RBP6.36□□□□□ -1.39
VCP-206ENST00000480327 JPT2Q9H910 190 aa6.36□□□□□ -1.39
VCP-206ENST00000480327 PHLDA3Q9Y5J5 127 aa6.36□□□□□ -1.39
VCP-206ENST00000480327 LY96Q9Y6Y9 160 aa6.36□□□□□ -1.39
VCP-206ENST00000480327 APOBP04114 4563 aaKnown RBP6.36□□□□□ -1.39
VCP-206ENST00000480327 IGHV4-4A0A075B6R2 117 aa6.35□□□□□ -1.39
VCP-206ENST00000480327 A0A0J9YY99 117 aa6.35□□□□□ -1.39
VCP-206ENST00000480327 LINC00862A6NCI5 91 aa6.35□□□□□ -1.39
VCP-206ENST00000480327 RTL8CO15255 209 aa6.35□□□□□ -1.39
VCP-206ENST00000480327 RPS20P60866 119 aaKnown RBP6.35□□□□□ -1.39
VCP-206ENST00000480327 TMEM88Q6PEY1 159 aa6.35□□□□□ -1.39
VCP-206ENST00000480327 POM121L12Q8N7R1 296 aa6.35□□□□□ -1.39
VCP-206ENST00000480327 SYT8Q8NBV8 401 aa6.35□□□□□ -1.39
VCP-206ENST00000480327 OR4C5Q8NGB2 326 aa6.35□□□□□ -1.39
VCP-206ENST00000480327 OR10AG1Q8NH19 301 aa6.35□□□□□ -1.39
VCP-206ENST00000480327 ISOC2Q96AB3 205 aa6.35□□□□□ -1.39
VCP-206ENST00000480327 KRTAP4-5Q9BYR2 181 aa6.35□□□□□ -1.39
VCP-206ENST00000480327 TRGV4A0A0C4DH28 118 aa6.34□□□□□ -1.39
VCP-206ENST00000480327 XKRY2A2RUG3 117 aa6.34□□□□□ -1.39
VCP-206ENST00000480327 CXCL1P09341 107 aa6.34□□□□□ -1.39
VCP-206ENST00000480327 S100A12P80511 92 aa6.34□□□□□ -1.39
VCP-206ENST00000480327 FHL2Q14192 279 aa6.34□□□□□ -1.39
VCP-206ENST00000480327 SPANXN1Q5VSR9 72 aa6.34□□□□□ -1.39
VCP-206ENST00000480327 UQCC3Q6UW78 93 aa6.34□□□□□ -1.39
VCP-206ENST00000480327 FAM231DQ6ZW35 169 aa6.34□□□□□ -1.39
VCP-206ENST00000480327 LINC00469Q8N7U9 141 aa6.34□□□□□ -1.39
VCP-206ENST00000480327 FER1L6-AS1Q8NA97 138 aa6.34□□□□□ -1.39
VCP-206ENST00000480327 SCRT2Q9NQ03 307 aa6.34□□□□□ -1.39
VCP-206ENST00000480327 TRAV26-1A0A087WT03 109 aa6.33□□□□□ -1.4
VCP-206ENST00000480327 A0A087WWL8 130 aa6.33□□□□□ -1.4
VCP-206ENST00000480327 TRAV4A0A0B4J268 109 aa6.33□□□□□ -1.4
VCP-206ENST00000480327 TMEM218A2RU14 115 aa6.33□□□□□ -1.4
VCP-206ENST00000480327 F8W036 122 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms