RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 FGF8P55075 233 aaPredicted RBP6.08□□□□□ -1.44
USP54-212ENST00000480210 ZNF726P1Q15940 193 aa6.08□□□□□ -1.44
USP54-212ENST00000480210 SLC25A34Q6PIV7 304 aa6.08□□□□□ -1.44
USP54-212ENST00000480210 FA2HQ7L5A8 372 aa6.08□□□□□ -1.44
USP54-212ENST00000480210 TMEM256Q8N2U0 113 aa6.08□□□□□ -1.44
USP54-212ENST00000480210 C20orf173Q96LM9 149 aa6.08□□□□□ -1.44
USP54-212ENST00000480210 WFDC10AQ9H1F0 79 aa6.08□□□□□ -1.44
USP54-212ENST00000480210 VCX2Q9H322 139 aa6.08□□□□□ -1.44
USP54-212ENST00000480210 LENEPQ9Y5L5 61 aa6.08□□□□□ -1.44
USP54-212ENST00000480210 KNCNA6PVL3 124 aa6.07□□□□□ -1.44
USP54-212ENST00000480210 CRXO43186 299 aaPredicted RBP6.07□□□□□ -1.44
USP54-212ENST00000480210 NUDT3O95989 172 aa6.07□□□□□ -1.44
USP54-212ENST00000480210 RPL35AP18077 110 aaKnown RBP6.07□□□□□ -1.44
USP54-212ENST00000480210 IGFL4Q6B9Z1 124 aa6.07□□□□□ -1.44
USP54-212ENST00000480210 C9orf47Q6ZRZ4 202 aa6.07□□□□□ -1.44
USP54-212ENST00000480210 EXOC3-AS1Q8N2X6 119 aa6.07□□□□□ -1.44
USP54-212ENST00000480210 RNF182Q8N6D2 247 aa6.07□□□□□ -1.44
USP54-212ENST00000480210 C5orf17Q8NAS9 161 aa6.07□□□□□ -1.44
USP54-212ENST00000480210 SIGMAR1Q99720 223 aa6.07□□□□□ -1.44
USP54-212ENST00000480210 TM2D3Q9BRN9 247 aa6.07□□□□□ -1.44
USP54-212ENST00000480210 OSTCQ9NRP0 149 aa6.07□□□□□ -1.44
USP54-212ENST00000480210 SNURFLB1AK76 121 aa6.06□□□□□ -1.44
USP54-212ENST00000480210 NPIPB6E9PJ23 425 aa6.06□□□□□ -1.44
USP54-212ENST00000480210 H3BTX0 84 aa6.06□□□□□ -1.44
USP54-212ENST00000480210 SIVA1O15304 175 aa6.06□□□□□ -1.44
USP54-212ENST00000480210 HSBP1O75506 76 aa6.06□□□□□ -1.44
USP54-212ENST00000480210 HLA-DMBP28068 263 aa6.06□□□□□ -1.44
USP54-212ENST00000480210 LEPP41159 167 aa6.06□□□□□ -1.44
USP54-212ENST00000480210 HINT1P49773 126 aaPredicted RBP6.06□□□□□ -1.44
USP54-212ENST00000480210 UBE2G1P62253 170 aa6.06□□□□□ -1.44
USP54-212ENST00000480210 TMEM78Q5T7P6 136 aa6.06□□□□□ -1.44
USP54-212ENST00000480210 ATP5L2Q7Z4Y8 100 aa6.06□□□□□ -1.44
USP54-212ENST00000480210 SBSPONQ8IVN8 264 aa6.06□□□□□ -1.44
USP54-212ENST00000480210 C11orf52Q96A22 123 aa6.06□□□□□ -1.44
USP54-212ENST00000480210 CHCHD1Q96BP2 118 aaKnown RBP6.06□□□□□ -1.44
USP54-212ENST00000480210 RNF183Q96D59 192 aa6.06□□□□□ -1.44
USP54-212ENST00000480210 RCHY1Q96PM5 261 aa6.06□□□□□ -1.44
USP54-212ENST00000480210 TMEM70Q9BUB7 260 aa6.06□□□□□ -1.44
USP54-212ENST00000480210 TMEM189A5PLL7 270 aa6.05□□□□□ -1.44
USP54-212ENST00000480210 SMIM9A6NGZ8 99 aa6.05□□□□□ -1.44
USP54-212ENST00000480210 F6UB75 175 aa6.05□□□□□ -1.44
USP54-212ENST00000480210 H3BRM9 83 aa6.05□□□□□ -1.44
USP54-212ENST00000480210 M0R3E3 92 aa6.05□□□□□ -1.44
USP54-212ENST00000480210 SPRY2O43597 315 aa6.05□□□□□ -1.44
USP54-212ENST00000480210 CA1P00915 261 aaPredicted RBP6.05□□□□□ -1.44
USP54-212ENST00000480210 GDF5OSQ5U4N7 250 aa6.05□□□□□ -1.44
USP54-212ENST00000480210 FER1L6-AS1Q8NA97 138 aa6.05□□□□□ -1.44
USP54-212ENST00000480210 ZNF492Q9P255 531 aa6.05□□□□□ -1.44
USP54-212ENST00000480210 NAT8BQ9UHF3 227 aa6.05□□□□□ -1.44
USP54-212ENST00000480210 EPDR1Q9UM22 224 aa6.05□□□□□ -1.44
USP54-212ENST00000480210 TAX1BP3O14907 124 aa6.04□□□□□ -1.44
USP54-212ENST00000480210 PAGE4O60829 102 aa6.04□□□□□ -1.44
USP54-212ENST00000480210 TCRAP04437 139 aa6.04□□□□□ -1.44
USP54-212ENST00000480210 C3orf79P0CE67 100 aa6.04□□□□□ -1.44
USP54-212ENST00000480210 ZNF138P52744 262 aa6.04□□□□□ -1.44
USP54-212ENST00000480210 AMTNQ6UX39 209 aa6.04□□□□□ -1.44
USP54-212ENST00000480210 Q8N976 141 aa6.04□□□□□ -1.44
USP54-212ENST00000480210 TMEM75Q8N9X5 138 aa6.04□□□□□ -1.44
USP54-212ENST00000480210 IGF2BP2-AS1Q96M15 143 aa6.04□□□□□ -1.44
USP54-212ENST00000480210 NDFIP1Q9BT67 221 aa6.04□□□□□ -1.44
USP54-212ENST00000480210 AGPAT4-IT1Q9H0P7 198 aa6.04□□□□□ -1.44
USP54-212ENST00000480210 HSPB8Q9UJY1 196 aa6.04□□□□□ -1.44
USP54-212ENST00000480210 PRAC2D3DTV9 90 aa6.03□□□□□ -1.44
USP54-212ENST00000480210 INSP01308 110 aa6.03□□□□□ -1.44
USP54-212ENST00000480210 APCSP02743 223 aa6.03□□□□□ -1.44
USP54-212ENST00000480210 MIFP14174 115 aa6.03□□□□□ -1.44
USP54-212ENST00000480210 BVES-AS1Q5T3Y7 98 aa6.03□□□□□ -1.44
USP54-212ENST00000480210 NEGR1Q7Z3B1 354 aa6.03□□□□□ -1.44
USP54-212ENST00000480210 CSNK1G2-AS1Q8NCQ2 148 aa6.03□□□□□ -1.44
USP54-212ENST00000480210 FAM19A4Q96LR4 140 aa6.03□□□□□ -1.44
USP54-212ENST00000480210 ASCL2Q99929 193 aa6.03□□□□□ -1.44
USP54-212ENST00000480210 OVOL2Q9BRP0 275 aa6.03□□□□□ -1.44
USP54-212ENST00000480210 YTHDF2Q9Y5A9 579 aaKnown RBP6.03□□□□□ -1.44
USP54-212ENST00000480210 FBN3Q75N90 2809 aa6.02□□□□□ -1.45
USP54-212ENST00000480210 TRBV6-1A0A0K0K1D8 114 aa6.02□□□□□ -1.45
USP54-212ENST00000480210 C9orf118A6NHY6 69 aa6.02□□□□□ -1.45
USP54-212ENST00000480210 GGTLC3B5MD39 225 aa6.02□□□□□ -1.45
USP54-212ENST00000480210 M0R2Z0 102 aa6.02□□□□□ -1.45
USP54-212ENST00000480210 PEX7O00628 323 aa6.02□□□□□ -1.45
USP54-212ENST00000480210 IGKV3-20P01619 116 aa6.02□□□□□ -1.45
USP54-212ENST00000480210 GIG44P09565 113 aaPredicted RBP6.02□□□□□ -1.45
USP54-212ENST00000480210 CT45A10P0DMU9 189 aa6.02□□□□□ -1.45
USP54-212ENST00000480210 GNG4P50150 75 aa6.02□□□□□ -1.45
USP54-212ENST00000480210 DEFB1P60022 68 aa6.02□□□□□ -1.45
USP54-212ENST00000480210 DEFB135Q30KP9 77 aa6.02□□□□□ -1.45
USP54-212ENST00000480210 LINC01559Q495D7 138 aa6.02□□□□□ -1.45
USP54-212ENST00000480210 AMMECR1LQ6DCA0 310 aa6.02□□□□□ -1.45
USP54-212ENST00000480210 GOLT1AQ6ZVE7 132 aa6.02□□□□□ -1.45
USP54-212ENST00000480210 OR11H2Q8NH07 326 aa6.02□□□□□ -1.45
USP54-212ENST00000480210 FMC1Q96HJ9 113 aa6.02□□□□□ -1.45
USP54-212ENST00000480210 VGLL1Q99990 258 aa6.02□□□□□ -1.45
USP54-212ENST00000480210 XCL2Q9UBD3 114 aa6.02□□□□□ -1.45
USP54-212ENST00000480210 TP53TG3Q9ULZ0 132 aa6.02□□□□□ -1.45
USP54-212ENST00000480210 U3KQK5 164 aa6.02□□□□□ -1.45
USP54-212ENST00000480210 IGKV2-40A0A087WW87 121 aaPredicted RBP6.01□□□□□ -1.45
USP54-212ENST00000480210 C7orf71A4D174 169 aa6.01□□□□□ -1.45
USP54-212ENST00000480210 GRIFINA4D1Z8 144 aa6.01□□□□□ -1.45
USP54-212ENST00000480210 KLLNB2CW77 178 aa6.01□□□□□ -1.45
USP54-212ENST00000480210 K7EP34 96 aa6.01□□□□□ -1.45
USP54-212ENST00000480210 NUPR1O60356 82 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms