RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 DAZAP1Q96EP5 407 aaKnown RBP7.6□□□□□ -1.19
ATG4B-219ENST00000479941 TRAV26-1A0A087WT03 109 aa7.59□□□□□ -1.19
ATG4B-219ENST00000479941 TRAV4A0A0B4J268 109 aa7.59□□□□□ -1.19
ATG4B-219ENST00000479941 GRIFINA4D1Z8 144 aa7.59□□□□□ -1.19
ATG4B-219ENST00000479941 PGPEP1LA6NFU8 196 aa7.59□□□□□ -1.19
ATG4B-219ENST00000479941 H3BNG1 76 aa7.59□□□□□ -1.19
ATG4B-219ENST00000479941 H3BVH4 76 aa7.59□□□□□ -1.19
ATG4B-219ENST00000479941 CIDEAO60543 219 aa7.59□□□□□ -1.19
ATG4B-219ENST00000479941 LY6G6CO95867 125 aa7.59□□□□□ -1.19
ATG4B-219ENST00000479941 IGHV3-53P01767 116 aa7.59□□□□□ -1.19
ATG4B-219ENST00000479941 ARMS2P0C7Q2 107 aa7.59□□□□□ -1.19
ATG4B-219ENST00000479941 CEBPGP53567 150 aa7.59□□□□□ -1.19
ATG4B-219ENST00000479941 RAB14P61106 215 aa7.59□□□□□ -1.19
ATG4B-219ENST00000479941 ZNF575Q86XF7 245 aa7.59□□□□□ -1.19
ATG4B-219ENST00000479941 OR4C5Q8NGB2 326 aa7.59□□□□□ -1.19
ATG4B-219ENST00000479941 SMDT1Q9H4I9 107 aa7.59□□□□□ -1.19
ATG4B-219ENST00000479941 DNAH2Q9P225 4427 aa7.58□□□□□ -1.2
ATG4B-219ENST00000479941 C19orf71A6NCJ1 209 aa7.58□□□□□ -1.2
ATG4B-219ENST00000479941 SRP19P09132 144 aaKnown RBP7.58□□□□□ -1.2
ATG4B-219ENST00000479941 P0DMU3 169 aa7.58□□□□□ -1.2
ATG4B-219ENST00000479941 FAM231AP0DMU4 169 aa7.58□□□□□ -1.2
ATG4B-219ENST00000479941 FAM231CP0DMU5 169 aa7.58□□□□□ -1.2
ATG4B-219ENST00000479941 MED14OSP0DP75 135 aa7.58□□□□□ -1.2
ATG4B-219ENST00000479941 FHL2Q14192 279 aa7.58□□□□□ -1.2
ATG4B-219ENST00000479941 PEA15Q15121 130 aa7.58□□□□□ -1.2
ATG4B-219ENST00000479941 POM121L12Q8N7R1 296 aa7.58□□□□□ -1.2
ATG4B-219ENST00000479941 SYT8Q8NBV8 401 aa7.58□□□□□ -1.2
ATG4B-219ENST00000479941 OCC1Q8TAD7 63 aa7.58□□□□□ -1.2
ATG4B-219ENST00000479941 ZNF479Q96JC4 524 aa7.58□□□□□ -1.2
ATG4B-219ENST00000479941 SCRT2Q9NQ03 307 aa7.58□□□□□ -1.2
ATG4B-219ENST00000479941 PRO0255Q9UI72 69 aa7.58□□□□□ -1.2
ATG4B-219ENST00000479941 HHLA3Q9XRX5 114 aa7.58□□□□□ -1.2
ATG4B-219ENST00000479941 PHLDA3Q9Y5J5 127 aa7.58□□□□□ -1.2
ATG4B-219ENST00000479941 TRGV4A0A0C4DH28 118 aa7.57□□□□□ -1.2
ATG4B-219ENST00000479941 A0A0J9YY99 117 aa7.57□□□□□ -1.2
ATG4B-219ENST00000479941 A8MWV9 139 aa7.57□□□□□ -1.2
ATG4B-219ENST00000479941 RS1O15537 224 aa7.57□□□□□ -1.2
ATG4B-219ENST00000479941 NUDT3O95989 172 aa7.57□□□□□ -1.2
ATG4B-219ENST00000479941 P01737 135 aa7.57□□□□□ -1.2
ATG4B-219ENST00000479941 SFTA3P0C7M3 94 aa7.57□□□□□ -1.2
ATG4B-219ENST00000479941 RPS20P60866 119 aaKnown RBP7.57□□□□□ -1.2
ATG4B-219ENST00000479941 RPL19P84098 196 aaKnown RBP7.57□□□□□ -1.2
ATG4B-219ENST00000479941 CFAP126Q5VTH2 177 aa7.57□□□□□ -1.2
ATG4B-219ENST00000479941 SMIM7Q9BQ49 75 aa7.57□□□□□ -1.2
ATG4B-219ENST00000479941 LY96Q9Y6Y9 160 aa7.57□□□□□ -1.2
ATG4B-219ENST00000479941 DNAH10Q8IVF4 4471 aa7.57□□□□□ -1.2
ATG4B-219ENST00000479941 XKRY2A2RUG3 117 aa7.56□□□□□ -1.2
ATG4B-219ENST00000479941 ZNF727A8MUV8 499 aa7.56□□□□□ -1.2
ATG4B-219ENST00000479941 K7EN84 100 aa7.56□□□□□ -1.2
ATG4B-219ENST00000479941 PAX4O43316 350 aa7.56□□□□□ -1.2
ATG4B-219ENST00000479941 CRYBA4P53673 196 aa7.56□□□□□ -1.2
ATG4B-219ENST00000479941 FAM74A3Q4VXF1 159 aa7.56□□□□□ -1.2
ATG4B-219ENST00000479941 ZFP82Q8N141 532 aa7.56□□□□□ -1.2
ATG4B-219ENST00000479941 NUDT10Q8NFP7 164 aa7.56□□□□□ -1.2
ATG4B-219ENST00000479941 OR2D3Q8NGH3 330 aa7.56□□□□□ -1.2
ATG4B-219ENST00000479941 NUDT11Q96G61 164 aa7.56□□□□□ -1.2
ATG4B-219ENST00000479941 VSIG2Q96IQ7 327 aa7.56□□□□□ -1.2
ATG4B-219ENST00000479941 SSBP4Q9BWG4 385 aaPredicted RBP7.56□□□□□ -1.2
ATG4B-219ENST00000479941 SNAI2O43623 268 aa7.55□□□□□ -1.2
ATG4B-219ENST00000479941 OR5AL1P0C617 328 aa7.55□□□□□ -1.2
ATG4B-219ENST00000479941 RNF212Q495C1 297 aa7.55□□□□□ -1.2
ATG4B-219ENST00000479941 CLLU1Q5K131 121 aa7.55□□□□□ -1.2
ATG4B-219ENST00000479941 DMRTA1Q5VZB9 504 aa7.55□□□□□ -1.2
ATG4B-219ENST00000479941 ZFP2Q6ZN57 461 aa7.55□□□□□ -1.2
ATG4B-219ENST00000479941 M0R381 172 aa7.54□□□□□ -1.2
ATG4B-219ENST00000479941 GATA1P15976 413 aaPredicted RBP7.54□□□□□ -1.2
ATG4B-219ENST00000479941 SRSF3P84103 164 aaKnown RBP7.54□□□□□ -1.2
ATG4B-219ENST00000479941 IFITM2Q01629 132 aa7.54□□□□□ -1.2
ATG4B-219ENST00000479941 FAM231DQ6ZW35 169 aa7.54□□□□□ -1.2
ATG4B-219ENST00000479941 LINC01551Q86U37 167 aa7.54□□□□□ -1.2
ATG4B-219ENST00000479941 UBE2DNLQ8IWF7 75 aa7.54□□□□□ -1.2
ATG4B-219ENST00000479941 SFRP2Q96HF1 295 aa7.54□□□□□ -1.2
ATG4B-219ENST00000479941 RNASE7Q9H1E1 156 aaKnown RBP7.54□□□□□ -1.2
ATG4B-219ENST00000479941 ICOSQ9Y6W8 199 aa7.54□□□□□ -1.2
ATG4B-219ENST00000479941 A0A096LPF7 62 aa7.53□□□□□ -1.2
ATG4B-219ENST00000479941 TRBV6-4A0A1B0GX49 114 aa7.53□□□□□ -1.2
ATG4B-219ENST00000479941 A0A1W2PPQ1 181 aa7.53□□□□□ -1.2
ATG4B-219ENST00000479941 C9JQL5 133 aa7.53□□□□□ -1.2
ATG4B-219ENST00000479941 RHODO00212 210 aa7.53□□□□□ -1.2
ATG4B-219ENST00000479941 NXPH4O95158 308 aa7.53□□□□□ -1.2
ATG4B-219ENST00000479941 IGLC6P0CF74 106 aa7.53□□□□□ -1.2
ATG4B-219ENST00000479941 CCL18P55774 89 aa7.53□□□□□ -1.2
ATG4B-219ENST00000479941 FAM3BP58499 235 aaPredicted RBP7.53□□□□□ -1.2
ATG4B-219ENST00000479941 MRPL23Q16540 153 aaKnown RBP7.53□□□□□ -1.2
ATG4B-219ENST00000479941 TMEM241Q24JQ0 296 aa7.53□□□□□ -1.2
ATG4B-219ENST00000479941 SPANXN1Q5VSR9 72 aa7.53□□□□□ -1.2
ATG4B-219ENST00000479941 FER1L6-AS1Q8NA97 138 aa7.53□□□□□ -1.2
ATG4B-219ENST00000479941 OR10AG1Q8NH19 301 aa7.53□□□□□ -1.2
ATG4B-219ENST00000479941 RPP21Q9H633 154 aaKnown RBP7.53□□□□□ -1.2
ATG4B-219ENST00000479941 NACAE9PAV3 2078 aa7.52□□□□□ -1.21
ATG4B-219ENST00000479941 IGHV3-73A0A0B4J1V6 119 aa7.52□□□□□ -1.21
ATG4B-219ENST00000479941 F2Z2F3 143 aa7.52□□□□□ -1.21
ATG4B-219ENST00000479941 K7EQD1 137 aa7.52□□□□□ -1.21
ATG4B-219ENST00000479941 GATCO43716 136 aaKnown RBP7.52□□□□□ -1.21
ATG4B-219ENST00000479941 GZMBP10144 247 aa7.52□□□□□ -1.21
ATG4B-219ENST00000479941 ERVFC1-1P60608 527 aa7.52□□□□□ -1.21
ATG4B-219ENST00000479941 RHOHQ15669 191 aa7.52□□□□□ -1.21
ATG4B-219ENST00000479941 SOHLH1Q5JUK2 328 aa7.52□□□□□ -1.21
ATG4B-219ENST00000479941 UFSP1Q6NVU6 142 aa7.52□□□□□ -1.21
ATG4B-219ENST00000479941 SLC25A29Q8N8R3 303 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms