RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 C7orf71A4D174 169 aa4.66□□□□□ -1.66
SF3B1-209ENST00000479532 NUPR1O60356 82 aa4.66□□□□□ -1.66
SF3B1-209ENST00000479532 COX7A2P2O60397 106 aa4.66□□□□□ -1.66
SF3B1-209ENST00000479532 CSN3P07498 182 aa4.66□□□□□ -1.66
SF3B1-209ENST00000479532 ORM2P19652 201 aa4.66□□□□□ -1.66
SF3B1-209ENST00000479532 UBE2G1P62253 170 aa4.66□□□□□ -1.66
SF3B1-209ENST00000479532 GAGE5Q13069 117 aa4.66□□□□□ -1.66
SF3B1-209ENST00000479532 GAGE6Q13070 117 aa4.66□□□□□ -1.66
SF3B1-209ENST00000479532 BOD1L2Q8IYS8 172 aa4.66□□□□□ -1.66
SF3B1-209ENST00000479532 MGST2Q99735 147 aa4.66□□□□□ -1.66
SF3B1-209ENST00000479532 RHPN1-AS1Q9BWJ2 59 aa4.66□□□□□ -1.66
SF3B1-209ENST00000479532 AAMDCQ9H7C9 122 aa4.66□□□□□ -1.66
SF3B1-209ENST00000479532 NAT8BQ9UHF3 227 aa4.66□□□□□ -1.66
SF3B1-209ENST00000479532 ERG28Q9UKR5 140 aa4.66□□□□□ -1.66
SF3B1-209ENST00000479532 HIGD1AQ9Y241 93 aa4.66□□□□□ -1.66
SF3B1-209ENST00000479532 LSM4Q9Y4Z0 139 aaKnown RBP4.66□□□□□ -1.66
SF3B1-209ENST00000479532 WNK1Q9H4A3 2382 aa4.66□□□□□ -1.66
SF3B1-209ENST00000479532 STAB1Q9NY15 2570 aa4.66□□□□□ -1.66
SF3B1-209ENST00000479532 TENM1Q9UKZ4 2725 aa4.65□□□□□ -1.66
SF3B1-209ENST00000479532 IGKV1OR2-108A0A075B7D4 117 aa4.65□□□□□ -1.67
SF3B1-209ENST00000479532 TRAV8-6A0A0B4J262 113 aa4.65□□□□□ -1.67
SF3B1-209ENST00000479532 TRAV25A0A0B4J276 109 aa4.65□□□□□ -1.67
SF3B1-209ENST00000479532 HELTA6NFD8 242 aa4.65□□□□□ -1.67
SF3B1-209ENST00000479532 CHEK1O14757 476 aa4.65□□□□□ -1.67
SF3B1-209ENST00000479532 IGLV1-51P01701 117 aa4.65□□□□□ -1.67
SF3B1-209ENST00000479532 C8orf88P0DMB2 117 aa4.65□□□□□ -1.67
SF3B1-209ENST00000479532 MPV17L2Q567V2 206 aa4.65□□□□□ -1.67
SF3B1-209ENST00000479532 SPATA12Q7Z6I5 190 aa4.65□□□□□ -1.67
SF3B1-209ENST00000479532 GTSCR1Q86UQ5 136 aa4.65□□□□□ -1.67
SF3B1-209ENST00000479532 OR8I2Q8N0Y5 310 aa4.65□□□□□ -1.67
SF3B1-209ENST00000479532 OR10G7Q8NGN6 311 aa4.65□□□□□ -1.67
SF3B1-209ENST00000479532 BLNKQ8WV28 456 aa4.65□□□□□ -1.67
SF3B1-209ENST00000479532 C11orf52Q96A22 123 aa4.65□□□□□ -1.67
SF3B1-209ENST00000479532 CHCHD1Q96BP2 118 aaKnown RBP4.65□□□□□ -1.67
SF3B1-209ENST00000479532 DERL1Q9BUN8 251 aa4.65□□□□□ -1.67
SF3B1-209ENST00000479532 GGTLC1Q9BX51 225 aa4.65□□□□□ -1.67
SF3B1-209ENST00000479532 NPCDR1Q9BY65 106 aa4.65□□□□□ -1.67
SF3B1-209ENST00000479532 TMEM191AQ9H0A3 160 aa4.65□□□□□ -1.67
SF3B1-209ENST00000479532 SLC39A9Q9NUM3 307 aa4.65□□□□□ -1.67
SF3B1-209ENST00000479532 CYSLTR1Q9Y271 337 aa4.65□□□□□ -1.67
SF3B1-209ENST00000479532 IGHV3-49A0A0A0MS15 119 aa4.64□□□□□ -1.67
SF3B1-209ENST00000479532 A0A1W2PPV4 95 aa4.64□□□□□ -1.67
SF3B1-209ENST00000479532 OR4C46A6NHA9 309 aa4.64□□□□□ -1.67
SF3B1-209ENST00000479532 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.64□□□□□ -1.67
SF3B1-209ENST00000479532 COX8AP10176 69 aa4.64□□□□□ -1.67
SF3B1-209ENST00000479532 FABP2P12104 132 aa4.64□□□□□ -1.67
SF3B1-209ENST00000479532 GATA2P23769 480 aaPredicted RBP4.64□□□□□ -1.67
SF3B1-209ENST00000479532 CMC4P56277 68 aaPredicted RBP4.64□□□□□ -1.67
SF3B1-209ENST00000479532 ZNF726P1Q15940 193 aa4.64□□□□□ -1.67
SF3B1-209ENST00000479532 DEFB114Q30KQ6 69 aa4.64□□□□□ -1.67
SF3B1-209ENST00000479532 C10orf113Q5VZT2 155 aa4.64□□□□□ -1.67
SF3B1-209ENST00000479532 MIC13Q5XKP0 118 aa4.64□□□□□ -1.67
SF3B1-209ENST00000479532 SIGLEC15Q6ZMC9 328 aa4.64□□□□□ -1.67
SF3B1-209ENST00000479532 SPAG8Q99932 426 aaPredicted RBP4.64□□□□□ -1.67
SF3B1-209ENST00000479532 TMEM70Q9BUB7 260 aa4.64□□□□□ -1.67
SF3B1-209ENST00000479532 VSIRQ9H7M9 311 aa4.64□□□□□ -1.67
SF3B1-209ENST00000479532 SLC25A22Q9H936 323 aa4.64□□□□□ -1.67
SF3B1-209ENST00000479532 SCRT2Q9NQ03 307 aa4.64□□□□□ -1.67
SF3B1-209ENST00000479532 ZNF256Q9Y2P7 627 aaPredicted RBP4.64□□□□□ -1.67
SF3B1-209ENST00000479532 IGHV3OR16-13A0A075B7E8 117 aa4.63□□□□□ -1.67
SF3B1-209ENST00000479532 IGHV3-74A0A0B4J1X5 117 aa4.63□□□□□ -1.67
SF3B1-209ENST00000479532 IGHV3-66A0A0C4DH42 116 aa4.63□□□□□ -1.67
SF3B1-209ENST00000479532 MUC21A0A0G2JKD1 596 aa4.63□□□□□ -1.67
SF3B1-209ENST00000479532 MUC21A0A140T8X8 626 aa4.63□□□□□ -1.67
SF3B1-209ENST00000479532 A0A1W2PPM0 123 aa4.63□□□□□ -1.67
SF3B1-209ENST00000479532 H3BRN7 92 aa4.63□□□□□ -1.67
SF3B1-209ENST00000479532 BUB3O43684 328 aa4.63□□□□□ -1.67
SF3B1-209ENST00000479532 GP9P14770 177 aa4.63□□□□□ -1.67
SF3B1-209ENST00000479532 RPL7P18124 248 aaKnown RBP4.63□□□□□ -1.67
SF3B1-209ENST00000479532 TCTAP57738 103 aa4.63□□□□□ -1.67
SF3B1-209ENST00000479532 EGFEM1PQ0D2K5 195 aa4.63□□□□□ -1.67
SF3B1-209ENST00000479532 SMAGPQ0VAQ4 97 aa4.63□□□□□ -1.67
SF3B1-209ENST00000479532 MUC21Q5SSG8 566 aa4.63□□□□□ -1.67
SF3B1-209ENST00000479532 LINC00305Q7Z4B0 112 aa4.63□□□□□ -1.67
SF3B1-209ENST00000479532 ATP5L2Q7Z4Y8 100 aa4.63□□□□□ -1.67
SF3B1-209ENST00000479532 OR10AG1Q8NH19 301 aa4.63□□□□□ -1.67
SF3B1-209ENST00000479532 GATAD1Q8WUU5 269 aa4.63□□□□□ -1.67
SF3B1-209ENST00000479532 SHANK2-AS3Q9BTD1 123 aa4.63□□□□□ -1.67
SF3B1-209ENST00000479532 MRPL32Q9BYC8 188 aaKnown RBP4.63□□□□□ -1.67
SF3B1-209ENST00000479532 SLC25A39Q9BZJ4 359 aaPredicted RBP4.63□□□□□ -1.67
SF3B1-209ENST00000479532 OSTCQ9NRP0 149 aa4.63□□□□□ -1.67
SF3B1-209ENST00000479532 IGKV3-7A0A075B6H7 116 aa4.62□□□□□ -1.67
SF3B1-209ENST00000479532 TRAV2A0A0B4J234 112 aa4.62□□□□□ -1.67
SF3B1-209ENST00000479532 GRIFINA4D1Z8 144 aa4.62□□□□□ -1.67
SF3B1-209ENST00000479532 FAM231BA6NCW3 169 aa4.62□□□□□ -1.67
SF3B1-209ENST00000479532 SNURFLB1AK76 121 aa4.62□□□□□ -1.67
SF3B1-209ENST00000479532 C11orf94C9JXX5 98 aa4.62□□□□□ -1.67
SF3B1-209ENST00000479532 PAGE4O60829 102 aa4.62□□□□□ -1.67
SF3B1-209ENST00000479532 APOHP02749 345 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-209ENST00000479532 ID1P41134 155 aa4.62□□□□□ -1.67
SF3B1-209ENST00000479532 TAS2R45P59539 299 aa4.62□□□□□ -1.67
SF3B1-209ENST00000479532 SNRPD3P62318 126 aaKnown RBP4.62□□□□□ -1.67
SF3B1-209ENST00000479532 C5orf47Q569G3 176 aa4.62□□□□□ -1.67
SF3B1-209ENST00000479532 KPRPQ5T749 579 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-209ENST00000479532 Q6Q795 121 aa4.62□□□□□ -1.67
SF3B1-209ENST00000479532 LCN15Q6UWW0 184 aa4.62□□□□□ -1.67
SF3B1-209ENST00000479532 ADAMTSL5Q6ZMM2 481 aa4.62□□□□□ -1.67
SF3B1-209ENST00000479532 TMEM136Q6ZRR5 245 aa4.62□□□□□ -1.67
SF3B1-209ENST00000479532 BPIFA4PQ86YQ2 179 aa4.62□□□□□ -1.67
SF3B1-209ENST00000479532 TMEM61Q8N0U2 210 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms