RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 LINC01619G3V211 115 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.24□□□□□ -1.89
GPNMB-210ENST00000478451 H3BUT2 72 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 OVOL1O14753 267 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 CDK2AP2O75956 126 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 NCR2O95944 276 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 IGHV4-59P01825 116 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 CTSGP08311 255 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 UBE2E1P51965 193 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 PAX8Q06710 450 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 KLF17Q5JT82 389 aaPredicted RBP3.24□□□□□ -1.89
GPNMB-210ENST00000478451 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 LYRM7Q5U5X0 104 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 SPANXN1Q5VSR9 72 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 SAMD13Q5VXD3 122 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 UFSP1Q6NVU6 142 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 CD164L2Q6UWJ8 174 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 ADAMTSL5Q6ZMM2 481 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 Q6ZVH6 145 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 TRPT1Q86TN4 253 aaKnown RBP3.24□□□□□ -1.89
GPNMB-210ENST00000478451 FAM223AQ8IWN6 122 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 ZNF502Q8TBZ5 544 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 LITAFQ99732 161 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 SPCS1Q9Y6A9 102 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 POLEQ07864 2286 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 NBEAQ8NFP9 2946 aa3.24□□□□□ -1.89
GPNMB-210ENST00000478451 ZNF292O60281 2723 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 GPR179Q6PRD1 2367 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 ANKRD11Q6UB99 2663 aaPredicted RBP3.23□□□□□ -1.89
GPNMB-210ENST00000478451 IGHV4-4A0A075B6R2 117 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 IGHV7-81A0A0B4J1V7 117 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 TRBV7-9A0A0J9YWB2 115 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 A0A1W2PRD5 423 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 A0A1W2PRF3 423 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 A0A1W2PRM7 423 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 SMIM1B2RUZ4 78 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 LYNX1G3V0Z9 82 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 H7C1H1 209 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 K7ENP7 123 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 M0R381 172 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 CCL21O00585 134 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 SNAI2O43623 268 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 LYNX1P0DP58 116 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 NBL1P41271 181 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 ATP5G2Q06055 141 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 KLRB1Q12918 225 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 KLRD1Q13241 179 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 C15orf32Q32M92 178 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 C14orf177Q52M58 125 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 C11orf71Q6IPW1 123 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 OR10J6PQ8NGY7 276 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 Q8TAT8 98 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 LINC01560Q8TB33 94 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 TMEM158Q8WZ71 300 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 RNF185Q96GF1 192 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 LINC00477Q96M19 166 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 FOXC2Q99958 501 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 VGLL1Q99990 258 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 C20orf78Q9BR46 151 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 CHAC1Q9BUX1 264 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 NOTCH3Q9UM47 2321 aa3.23□□□□□ -1.89
GPNMB-210ENST00000478451 A0A087WX48 190 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 TRAV21A0A0B4J279 112 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 OR11H12B2RN74 326 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 F8VRH5 84 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 F8W1H4 67 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 G3V4G9 280 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 SMKR1H3BMG3 65 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 H3BUA1 57 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 SCGB1A1P11684 91 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 S100A4P26447 101 aaKnown RBP3.22□□□□□ -1.89
GPNMB-210ENST00000478451 ASIPP42127 132 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 ZNF80P51504 273 aaPredicted RBP3.22□□□□□ -1.89
GPNMB-210ENST00000478451 HERVK_113P61574 105 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 LOXL1Q08397 574 aaPredicted RBP3.22□□□□□ -1.89
GPNMB-210ENST00000478451 SCGB2A2Q13296 93 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 ECSCRQ19T08 205 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 FAM106AQ4KMX7 169 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 ZC2HC1BQ5TFG8 222 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 STHQ8IWL8 128 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 CEND1Q8N111 149 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 DYNAPQ8N1N2 210 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 Q8N9W7 124 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 OR11H1Q8NG94 326 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 OR11H2Q8NH07 326 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 RAB37Q96AX2 223 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 C18orf15Q96N68 181 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 MCRIP2Q9BUT9 160 aaKnown RBP3.22□□□□□ -1.89
GPNMB-210ENST00000478451 SMIM2Q9BVW6 85 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 SIRPDQ9H106 197 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 VCX2Q9H322 139 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 DPH3P1Q9H4G8 78 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 MOB4Q9Y3A3 225 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 UFC1Q9Y3C8 167 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 SMAD5-AS1Q9Y6J3 95 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 S4R3C0 116 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 ARHGAP32A7KAX9 2087 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 CEP250Q9BV73 2442 aa3.22□□□□□ -1.89
GPNMB-210ENST00000478451 ANKHD1Q8IWZ3 2542 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms