RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 ZNF506Q5JVG8 444 aa10.77□□□□□ -0.69
HMGA1-206ENST00000478214 BAGE2Q86Y30 109 aa10.77□□□□□ -0.69
HMGA1-206ENST00000478214 TMSB15BA0A087X1C1 80 aa10.76□□□□□ -0.69
HMGA1-206ENST00000478214 GRIFINA4D1Z8 144 aa10.76□□□□□ -0.69
HMGA1-206ENST00000478214 RS1O15537 224 aa10.76□□□□□ -0.69
HMGA1-206ENST00000478214 CFAP126Q5VTH2 177 aa10.76□□□□□ -0.69
HMGA1-206ENST00000478214 ALKAL2Q6UX46 152 aa10.76□□□□□ -0.69
HMGA1-206ENST00000478214 ZNF575Q86XF7 245 aa10.76□□□□□ -0.69
HMGA1-206ENST00000478214 C11orf52Q96A22 123 aa10.76□□□□□ -0.69
HMGA1-206ENST00000478214 PTH2Q96A98 100 aa10.76□□□□□ -0.69
HMGA1-206ENST00000478214 DERL1Q9BUN8 251 aa10.76□□□□□ -0.69
HMGA1-206ENST00000478214 MLST8Q9BVC4 326 aa10.76□□□□□ -0.69
HMGA1-206ENST00000478214 NBDYA0A0U1RRE5 68 aa10.75□□□□□ -0.69
HMGA1-206ENST00000478214 H3BVH4 76 aa10.75□□□□□ -0.69
HMGA1-206ENST00000478214 RTL8CO15255 209 aa10.75□□□□□ -0.69
HMGA1-206ENST00000478214 GYPEP15421 78 aa10.75□□□□□ -0.69
HMGA1-206ENST00000478214 GATA1P15976 413 aaPredicted RBP10.75□□□□□ -0.69
HMGA1-206ENST00000478214 RPL35P42766 123 aaKnown RBP10.75□□□□□ -0.69
HMGA1-206ENST00000478214 MRPL23Q16540 153 aaKnown RBP10.75□□□□□ -0.69
HMGA1-206ENST00000478214 LINC01559Q495D7 138 aa10.75□□□□□ -0.69
HMGA1-206ENST00000478214 TXNDC17Q9BRA2 123 aa10.75□□□□□ -0.69
HMGA1-206ENST00000478214 Q9H8V8 135 aa10.75□□□□□ -0.69
HMGA1-206ENST00000478214 MRPS16Q9Y3D3 137 aaKnown RBP10.75□□□□□ -0.69
HMGA1-206ENST00000478214 BOLA1Q9Y3E2 137 aa10.75□□□□□ -0.69
HMGA1-206ENST00000478214 IGHV3-73A0A0B4J1V6 119 aa10.74□□□□□ -0.69
HMGA1-206ENST00000478214 K7EQD1 137 aa10.74□□□□□ -0.69
HMGA1-206ENST00000478214 IFNA1P01562 189 aa10.74□□□□□ -0.69
HMGA1-206ENST00000478214 ARMS2P0C7Q2 107 aa10.74□□□□□ -0.69
HMGA1-206ENST00000478214 DNLZQ5SXM8 178 aa10.74□□□□□ -0.69
HMGA1-206ENST00000478214 UPK3BQ9BT76 320 aa10.74□□□□□ -0.69
HMGA1-206ENST00000478214 IL36BQ9NZH7 164 aa10.74□□□□□ -0.69
HMGA1-206ENST00000478214 LOC100131303A0A0U1RQF7 123 aa10.73□□□□□ -0.69
HMGA1-206ENST00000478214 BCL2P10415 239 aa10.73□□□□□ -0.69
HMGA1-206ENST00000478214 MEF2BQ02080 365 aaPredicted RBP10.73□□□□□ -0.69
HMGA1-206ENST00000478214 NEGR1Q7Z3B1 354 aa10.73□□□□□ -0.69
HMGA1-206ENST00000478214 PCNPQ8WW12 178 aaKnown RBP10.73□□□□□ -0.69
HMGA1-206ENST00000478214 SRIP30626 198 aa10.72□□□□□ -0.69
HMGA1-206ENST00000478214 RPL19P84098 196 aaKnown RBP10.72□□□□□ -0.69
HMGA1-206ENST00000478214 DMRTA1Q5VZB9 504 aa10.72□□□□□ -0.69
HMGA1-206ENST00000478214 PRR27Q6MZM9 219 aa10.72□□□□□ -0.69
HMGA1-206ENST00000478214 LYPD5Q6UWN5 251 aa10.72□□□□□ -0.69
HMGA1-206ENST00000478214 LINC00336Q6ZUF6 198 aa10.72□□□□□ -0.69
HMGA1-206ENST00000478214 JPT2Q9H910 190 aa10.72□□□□□ -0.69
HMGA1-206ENST00000478214 PDE6DO43924 150 aa10.71□□□□□ -0.69
HMGA1-206ENST00000478214 CIDEAO60543 219 aa10.71□□□□□ -0.69
HMGA1-206ENST00000478214 CENPWQ5EE01 88 aa10.71□□□□□ -0.69
HMGA1-206ENST00000478214 PIK3CD-AS1Q5SR53 167 aa10.71□□□□□ -0.69
HMGA1-206ENST00000478214 C1orf134Q5TEV5 83 aa10.71□□□□□ -0.69
HMGA1-206ENST00000478214 SLC25A29Q8N8R3 303 aa10.71□□□□□ -0.69
HMGA1-206ENST00000478214 KRTAP1-5Q9BYS1 174 aa10.71□□□□□ -0.69
HMGA1-206ENST00000478214 PARLQ9H300 379 aa10.71□□□□□ -0.69
HMGA1-206ENST00000478214 VAX2Q9UIW0 290 aa10.71□□□□□ -0.69
HMGA1-206ENST00000478214 RAB19A4D1S5 217 aa10.7□□□□□ -0.7
HMGA1-206ENST00000478214 A8MWV9 139 aa10.7□□□□□ -0.7
HMGA1-206ENST00000478214 BLOC1S1P78537 153 aa10.7□□□□□ -0.7
HMGA1-206ENST00000478214 SCRT2Q9NQ03 307 aa10.7□□□□□ -0.7
HMGA1-206ENST00000478214 MED9Q9NWA0 146 aa10.7□□□□□ -0.7
HMGA1-206ENST00000478214 PHLDA3Q9Y5J5 127 aa10.7□□□□□ -0.7
HMGA1-206ENST00000478214 PRSS29PA6NIE9 313 aa10.69□□□□□ -0.7
HMGA1-206ENST00000478214 NXPH4O95158 308 aa10.69□□□□□ -0.7
HMGA1-206ENST00000478214 IGLV2-8P01709 118 aa10.69□□□□□ -0.7
HMGA1-206ENST00000478214 SOHLH1Q5JUK2 328 aa10.69□□□□□ -0.7
HMGA1-206ENST00000478214 Q6ZSN1 163 aa10.69□□□□□ -0.7
HMGA1-206ENST00000478214 SYT8Q8NBV8 401 aa10.69□□□□□ -0.7
HMGA1-206ENST00000478214 SAMD10Q9BYL1 202 aa10.69□□□□□ -0.7
HMGA1-206ENST00000478214 TRBV6-4A0A1B0GX49 114 aa10.68□□□□□ -0.7
HMGA1-206ENST00000478214 M0R381 172 aa10.68□□□□□ -0.7
HMGA1-206ENST00000478214 MGST1P10620 155 aaKnown RBP10.68□□□□□ -0.7
HMGA1-206ENST00000478214 TAGLN2P37802 199 aaKnown RBP10.68□□□□□ -0.7
HMGA1-206ENST00000478214 GNG4P50150 75 aa10.68□□□□□ -0.7
HMGA1-206ENST00000478214 RHOHQ15669 191 aa10.68□□□□□ -0.7
HMGA1-206ENST00000478214 TTC32Q5I0X7 151 aa10.68□□□□□ -0.7
HMGA1-206ENST00000478214 UFSP1Q6NVU6 142 aa10.68□□□□□ -0.7
HMGA1-206ENST00000478214 ZFP2Q6ZN57 461 aa10.68□□□□□ -0.7
HMGA1-206ENST00000478214 C6orf223Q8N319 242 aa10.68□□□□□ -0.7
HMGA1-206ENST00000478214 PRADC1Q9BSG0 188 aa10.68□□□□□ -0.7
HMGA1-206ENST00000478214 TRBV20OR9-2A0A075B6H5 130 aa10.67□□□□□ -0.7
HMGA1-206ENST00000478214 SIVA1O15304 175 aa10.67□□□□□ -0.7
HMGA1-206ENST00000478214 LYPD6BQ8NI32 183 aa10.67□□□□□ -0.7
HMGA1-206ENST00000478214 PKD1P98161 4303 aa10.66□□□□□ -0.7
HMGA1-206ENST00000478214 A0A1B0GVY2 172 aa10.66□□□□□ -0.7
HMGA1-206ENST00000478214 CXCL1P09341 107 aa10.66□□□□□ -0.7
HMGA1-206ENST00000478214 MED14OSP0DP75 135 aa10.66□□□□□ -0.7
HMGA1-206ENST00000478214 SH2D6Q7Z4S9 175 aa10.66□□□□□ -0.7
HMGA1-206ENST00000478214 ZFP82Q8N141 532 aa10.66□□□□□ -0.7
HMGA1-206ENST00000478214 SFRP2Q96HF1 295 aa10.66□□□□□ -0.7
HMGA1-206ENST00000478214 PKHD1P08F94 4074 aa10.65□□□□□ -0.7
HMGA1-206ENST00000478214 A0A087WWL8 130 aa10.65□□□□□ -0.7
HMGA1-206ENST00000478214 A0A1W2PPQ1 181 aa10.65□□□□□ -0.7
HMGA1-206ENST00000478214 RBFOX3A6NFN3 312 aa10.65□□□□□ -0.7
HMGA1-206ENST00000478214 FAM74A4Q5TZK3 123 aa10.65□□□□□ -0.7
HMGA1-206ENST00000478214 OR10AG1Q8NH19 301 aa10.65□□□□□ -0.7
HMGA1-206ENST00000478214 SMIM12Q96EX1 92 aa10.65□□□□□ -0.7
HMGA1-206ENST00000478214 MUC21A0A0G2JKD1 596 aa10.64□□□□□ -0.71
HMGA1-206ENST00000478214 MUC21A0A140T8X8 626 aa10.64□□□□□ -0.71
HMGA1-206ENST00000478214 C19orf71A6NCJ1 209 aa10.64□□□□□ -0.71
HMGA1-206ENST00000478214 RHODO00212 210 aa10.64□□□□□ -0.71
HMGA1-206ENST00000478214 SNAI2O43623 268 aa10.64□□□□□ -0.71
HMGA1-206ENST00000478214 CRYGDP07320 174 aa10.64□□□□□ -0.71
HMGA1-206ENST00000478214 WFDC10BQ8IUB3 73 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms