RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 PGPEP1LA6NFU8 196 aa7.19□□□□□ -1.26
HDAC6-222ENST00000478095 KRBOX1C9JBD0 128 aa7.19□□□□□ -1.26
HDAC6-222ENST00000478095 H3BVH4 76 aa7.19□□□□□ -1.26
HDAC6-222ENST00000478095 MGST1P10620 155 aaKnown RBP7.19□□□□□ -1.26
HDAC6-222ENST00000478095 RNASE3P12724 160 aaKnown RBP7.19□□□□□ -1.26
HDAC6-222ENST00000478095 TAGLN2P37802 199 aaKnown RBP7.19□□□□□ -1.26
HDAC6-222ENST00000478095 ASIPP42127 132 aa7.19□□□□□ -1.26
HDAC6-222ENST00000478095 RPL19P84098 196 aaKnown RBP7.19□□□□□ -1.26
HDAC6-222ENST00000478095 RASL10AQ92737 203 aa7.19□□□□□ -1.26
HDAC6-222ENST00000478095 ZNF479Q96JC4 524 aa7.19□□□□□ -1.26
HDAC6-222ENST00000478095 C9orf85Q96MD7 179 aa7.19□□□□□ -1.26
HDAC6-222ENST00000478095 C18orf15Q96N68 181 aa7.19□□□□□ -1.26
HDAC6-222ENST00000478095 MLST8Q9BVC4 326 aa7.19□□□□□ -1.26
HDAC6-222ENST00000478095 DNAH1Q9P2D7 4330 aa7.19□□□□□ -1.26
HDAC6-222ENST00000478095 HYDINQ4G0P3 5121 aa7.18□□□□□ -1.26
HDAC6-222ENST00000478095 PAX4O43316 350 aa7.18□□□□□ -1.26
HDAC6-222ENST00000478095 IGLV2-8P01709 118 aa7.18□□□□□ -1.26
HDAC6-222ENST00000478095 GNG4P50150 75 aa7.18□□□□□ -1.26
HDAC6-222ENST00000478095 CEBPGP53567 150 aa7.18□□□□□ -1.26
HDAC6-222ENST00000478095 ZNF876PQ49A33 203 aa7.18□□□□□ -1.26
HDAC6-222ENST00000478095 ZNF506Q5JVG8 444 aa7.18□□□□□ -1.26
HDAC6-222ENST00000478095 POM121L12Q8N7R1 296 aa7.18□□□□□ -1.26
HDAC6-222ENST00000478095 C15orf53Q8NAA6 179 aa7.18□□□□□ -1.26
HDAC6-222ENST00000478095 EIF5A2Q9GZV4 153 aaKnown RBP7.18□□□□□ -1.26
HDAC6-222ENST00000478095 TRGV4A0A0C4DH28 118 aa7.17□□□□□ -1.26
HDAC6-222ENST00000478095 ARMS2P0C7Q2 107 aa7.17□□□□□ -1.26
HDAC6-222ENST00000478095 UBE2DNLQ8IWF7 75 aa7.17□□□□□ -1.26
HDAC6-222ENST00000478095 OR4C5Q8NGB2 326 aa7.17□□□□□ -1.26
HDAC6-222ENST00000478095 VSIG2Q96IQ7 327 aa7.17□□□□□ -1.26
HDAC6-222ENST00000478095 IGHV3-73A0A0B4J1V6 119 aa7.16□□□□□ -1.26
HDAC6-222ENST00000478095 TRAV4A0A0B4J268 109 aa7.16□□□□□ -1.26
HDAC6-222ENST00000478095 P0DMU3 169 aa7.16□□□□□ -1.26
HDAC6-222ENST00000478095 FAM231AP0DMU4 169 aa7.16□□□□□ -1.26
HDAC6-222ENST00000478095 FAM231CP0DMU5 169 aa7.16□□□□□ -1.26
HDAC6-222ENST00000478095 FHL2Q14192 279 aa7.16□□□□□ -1.26
HDAC6-222ENST00000478095 ZNF575Q86XF7 245 aa7.16□□□□□ -1.26
HDAC6-222ENST00000478095 FAM210AQ96ND0 272 aa7.16□□□□□ -1.26
HDAC6-222ENST00000478095 PARLQ9H300 379 aa7.16□□□□□ -1.26
HDAC6-222ENST00000478095 IL36BQ9NZH7 164 aa7.16□□□□□ -1.26
HDAC6-222ENST00000478095 LYSTQ99698 3801 aa7.16□□□□□ -1.26
HDAC6-222ENST00000478095 TMEM250H0YL14 139 aa7.15□□□□□ -1.26
HDAC6-222ENST00000478095 CFAP126Q5VTH2 177 aa7.15□□□□□ -1.26
HDAC6-222ENST00000478095 PRO0255Q9UI72 69 aa7.15□□□□□ -1.26
HDAC6-222ENST00000478095 HHLA3Q9XRX5 114 aa7.15□□□□□ -1.26
HDAC6-222ENST00000478095 A0A096LPF7 62 aa7.14□□□□□ -1.27
HDAC6-222ENST00000478095 MUC21A0A0G2JKD1 596 aa7.14□□□□□ -1.27
HDAC6-222ENST00000478095 MUC21A0A140T8X8 626 aa7.14□□□□□ -1.27
HDAC6-222ENST00000478095 M0R381 172 aa7.14□□□□□ -1.27
HDAC6-222ENST00000478095 RS1O15537 224 aa7.14□□□□□ -1.27
HDAC6-222ENST00000478095 GZMBP10144 247 aa7.14□□□□□ -1.27
HDAC6-222ENST00000478095 CRYBA4P53673 196 aa7.14□□□□□ -1.27
HDAC6-222ENST00000478095 DNLZQ5SXM8 178 aa7.14□□□□□ -1.27
HDAC6-222ENST00000478095 OR2D3Q8NGH3 330 aa7.14□□□□□ -1.27
HDAC6-222ENST00000478095 DAZAP1Q96EP5 407 aaKnown RBP7.14□□□□□ -1.27
HDAC6-222ENST00000478095 SMIM12Q96EX1 92 aa7.14□□□□□ -1.27
HDAC6-222ENST00000478095 JPT2Q9H910 190 aa7.14□□□□□ -1.27
HDAC6-222ENST00000478095 SCRT2Q9NQ03 307 aa7.14□□□□□ -1.27
HDAC6-222ENST00000478095 PHLDA3Q9Y5J5 127 aa7.14□□□□□ -1.27
HDAC6-222ENST00000478095 VPS13DQ5THJ4 4388 aa7.13□□□□□ -1.27
HDAC6-222ENST00000478095 IGLV2-18A0A075B6J9 118 aa7.13□□□□□ -1.27
HDAC6-222ENST00000478095 C19orf71A6NCJ1 209 aa7.13□□□□□ -1.27
HDAC6-222ENST00000478095 H3BNG1 76 aa7.13□□□□□ -1.27
HDAC6-222ENST00000478095 K7EN84 100 aa7.13□□□□□ -1.27
HDAC6-222ENST00000478095 P01737 135 aa7.13□□□□□ -1.27
HDAC6-222ENST00000478095 SRP19P09132 144 aaKnown RBP7.13□□□□□ -1.27
HDAC6-222ENST00000478095 SSTP61278 116 aa7.13□□□□□ -1.27
HDAC6-222ENST00000478095 SRSF3P84103 164 aaKnown RBP7.13□□□□□ -1.27
HDAC6-222ENST00000478095 SYT8Q8NBV8 401 aa7.13□□□□□ -1.27
HDAC6-222ENST00000478095 OR10AG1Q8NH19 301 aa7.13□□□□□ -1.27
HDAC6-222ENST00000478095 OCC1Q8TAD7 63 aa7.13□□□□□ -1.27
HDAC6-222ENST00000478095 PTH2Q96A98 100 aa7.13□□□□□ -1.27
HDAC6-222ENST00000478095 SAMD10Q9BYL1 202 aa7.13□□□□□ -1.27
HDAC6-222ENST00000478095 ICOSQ9Y6W8 199 aa7.13□□□□□ -1.27
HDAC6-222ENST00000478095 LOC100131303A0A0U1RQF7 123 aa7.12□□□□□ -1.27
HDAC6-222ENST00000478095 C9JQL5 133 aa7.12□□□□□ -1.27
HDAC6-222ENST00000478095 CXCL1P09341 107 aa7.12□□□□□ -1.27
HDAC6-222ENST00000478095 GYPEP15421 78 aa7.12□□□□□ -1.27
HDAC6-222ENST00000478095 GATA1P15976 413 aaPredicted RBP7.12□□□□□ -1.27
HDAC6-222ENST00000478095 CCL18P55774 89 aa7.12□□□□□ -1.27
HDAC6-222ENST00000478095 SLAQ13239 276 aa7.12□□□□□ -1.27
HDAC6-222ENST00000478095 ZFP82Q8N141 532 aa7.12□□□□□ -1.27
HDAC6-222ENST00000478095 SMIM7Q9BQ49 75 aa7.12□□□□□ -1.27
HDAC6-222ENST00000478095 TPPP3Q9BW30 176 aa7.12□□□□□ -1.27
HDAC6-222ENST00000478095 KRTAP4-8Q9BYQ9 185 aa7.12□□□□□ -1.27
HDAC6-222ENST00000478095 RNASE7Q9H1E1 156 aaKnown RBP7.12□□□□□ -1.27
HDAC6-222ENST00000478095 BIN3Q9NQY0 253 aa7.12□□□□□ -1.27
HDAC6-222ENST00000478095 LINC00588Q9Y4M8 146 aa7.12□□□□□ -1.27
HDAC6-222ENST00000478095 A0A087WWL8 130 aa7.11□□□□□ -1.27
HDAC6-222ENST00000478095 A8MWV9 139 aa7.11□□□□□ -1.27
HDAC6-222ENST00000478095 K7EQD1 137 aa7.11□□□□□ -1.27
HDAC6-222ENST00000478095 M0R2N4 97 aa7.11□□□□□ -1.27
HDAC6-222ENST00000478095 MED14OSP0DP75 135 aa7.11□□□□□ -1.27
HDAC6-222ENST00000478095 ESRGQ1W209 222 aa7.11□□□□□ -1.27
HDAC6-222ENST00000478095 RNF212Q495C1 297 aa7.11□□□□□ -1.27
HDAC6-222ENST00000478095 FAM74A4Q5TZK3 123 aa7.11□□□□□ -1.27
HDAC6-222ENST00000478095 SPANXN1Q5VSR9 72 aa7.11□□□□□ -1.27
HDAC6-222ENST00000478095 Q6ZSN1 163 aa7.11□□□□□ -1.27
HDAC6-222ENST00000478095 SLC25A29Q8N8R3 303 aa7.11□□□□□ -1.27
HDAC6-222ENST00000478095 NUDT10Q8NFP7 164 aa7.11□□□□□ -1.27
HDAC6-222ENST00000478095 NUDT11Q96G61 164 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms