RNA–Protein interactions for RNA: ENST00000477434.5

PDZRN3-206, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-206ENST00000477434 BCL2P10415 239 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 CMC4P56277 68 aaPredicted RBP2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 UBE2G2P60604 165 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 SNRPD3P62318 126 aaKnown RBP2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 MEF2BQ02080 365 aaPredicted RBP2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 PSG3Q16557 428 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 ZNF506Q5JVG8 444 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 KRTAP5-4Q6L8H1 288 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 LINC00322Q6ZN03 302 aaPredicted RBP2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 EXOC3-AS1Q8N2X6 119 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 EIF4E3Q8N5X7 224 aaKnown RBP2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 RXFP4Q8TDU9 374 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 HIST1H2BAQ96A08 127 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 C11orf52Q96A22 123 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 MRPL53Q96EL3 112 aaKnown RBP2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 RARRES2Q99969 163 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 TCEAL7Q9BRU2 100 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 GPR61Q9BZJ8 451 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 EIF5A2Q9GZV4 153 aaKnown RBP2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 Q9H3A6 140 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 OTORQ9NRC9 128 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 GNG13Q9P2W3 67 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 VAX2Q9UIW0 290 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 EPDR1Q9UM22 224 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 PRELID1Q9Y255 219 aa2.82□□□□□ -1.96
PDZRN3-206ENST00000477434 MUC4Q99102 2169 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 SERTM2A0A1B0GWG4 89 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 ZNF705FA8MVS1 300 aaPredicted RBP2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 KLLNB2CW77 178 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 C9JQL5 133 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 C11orf94C9JXX5 98 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 F6UZH7 168 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 TMEM250H0YL14 139 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 PDE6DO43924 150 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 TCRAP04437 139 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 SLC25A5P05141 298 aaKnown RBP2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 SRP19P09132 144 aaKnown RBP2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 CD7P09564 240 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 HLA-DMBP28068 263 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 CSN1S1P47710 185 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 ATP5G3P48201 142 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 TFPI2P48307 235 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 PEA15Q15121 130 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 RBMY1FQ15415 496 aaKnown RBP2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 GUCA2BQ16661 112 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 UQCC3Q6UW78 93 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 FAM24BQ8N5W8 94 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 RNF182Q8N6D2 247 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 C5orf17Q8NAS9 161 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 CMTM2Q8TAZ6 248 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 RPUSD4Q96CM3 377 aaKnown RBP2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 LINC00052Q96N35 136 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 OCR1Q9BZK8 76 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 SLC35B3Q9H1N7 401 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 ZMAT5Q9UDW3 170 aaKnown RBP2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 KLF12Q9Y4X4 402 aa2.81□□□□□ -1.96
PDZRN3-206ENST00000477434 FAT1Q14517 4588 aa2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 RBAKDNA6NC62 111 aa2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 FBLL1A6NHQ2 334 aaKnown RBP2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 OR11H12B2RN74 326 aa2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 PEX7O00628 323 aa2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 PHOX2AO14813 284 aa2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 S100A9P06702 114 aaKnown RBP2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 ZNF688P0C7X2 276 aa2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 NDUFV3P56181 108 aaKnown RBP2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 DEFB131AP59861 70 aa2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 NDUFA5Q16718 116 aa2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 PSMG4Q5JS54 123 aa2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 GDF5OSQ5U4N7 250 aa2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 FOXI2Q6ZQN5 318 aa2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 COMMD7Q86VX2 200 aa2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 DEFB125Q8N687 156 aa2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 CYB561D1Q8N8Q1 229 aa2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 CSNK1G2-AS1Q8NCQ2 148 aa2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 ZNF738Q8NE65 137 aa2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 OR8A1Q8NGG7 326 aa2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 LINC00477Q96M19 166 aa2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 ATG101Q9BSB4 218 aa2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 AGPAT4-IT1Q9H0P7 198 aa2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 SAV1Q9H4B6 383 aaPredicted RBP2.8□□□□□ -1.96
PDZRN3-206ENST00000477434 IGKV2-40A0A087WW87 121 aaPredicted RBP2.79□□□□□ -1.96
PDZRN3-206ENST00000477434 TRAV8-1A0A0A6YYK1 113 aa2.79□□□□□ -1.96
PDZRN3-206ENST00000477434 TRBV7-9A0A0J9YWB2 115 aa2.79□□□□□ -1.96
PDZRN3-206ENST00000477434 A0A0J9YX75 114 aa2.79□□□□□ -1.96
PDZRN3-206ENST00000477434 TRBV6-1A0A0K0K1D8 114 aa2.79□□□□□ -1.96
PDZRN3-206ENST00000477434 TMEM218A2RU14 115 aa2.79□□□□□ -1.96
PDZRN3-206ENST00000477434 C9JCJ5 164 aa2.79□□□□□ -1.96
PDZRN3-206ENST00000477434 F6UB75 175 aa2.79□□□□□ -1.96
PDZRN3-206ENST00000477434 H3BMM0 161 aa2.79□□□□□ -1.96
PDZRN3-206ENST00000477434 K7EQM0 130 aa2.79□□□□□ -1.96
PDZRN3-206ENST00000477434 DUSP14O95147 198 aaKnown RBP2.79□□□□□ -1.96
PDZRN3-206ENST00000477434 IGKV2D-40P01614 121 aaPredicted RBP2.79□□□□□ -1.96
PDZRN3-206ENST00000477434 ZNF705DP0CH99 300 aaPredicted RBP2.79□□□□□ -1.96
PDZRN3-206ENST00000477434 ZNF705BP0CI00 300 aaPredicted RBP2.79□□□□□ -1.96
PDZRN3-206ENST00000477434 CT45A10P0DMU9 189 aa2.79□□□□□ -1.96
PDZRN3-206ENST00000477434 PRB4P10163 310 aaPredicted RBP2.79□□□□□ -1.96
PDZRN3-206ENST00000477434 HLA-DRB4P13762 266 aa2.79□□□□□ -1.96
PDZRN3-206ENST00000477434 RPL35P42766 123 aaKnown RBP2.79□□□□□ -1.96
PDZRN3-206ENST00000477434 CNN1P51911 297 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms