RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 PLEKHB2Q96CS7 222 aa11.67□□□□□ -0.54
CLSTN1-205ENST00000477264 C11orf21Q9P2W6 132 aa11.67□□□□□ -0.54
CLSTN1-205ENST00000477264 S4R3C0 116 aa11.67□□□□□ -0.54
CLSTN1-205ENST00000477264 C2orf66Q6UXQ4 117 aa11.66□□□□□ -0.54
CLSTN1-205ENST00000477264 RASL10AQ92737 203 aa11.66□□□□□ -0.54
CLSTN1-205ENST00000477264 A0A0J9YY99 117 aa11.65□□□□□ -0.54
CLSTN1-205ENST00000477264 SNCGO76070 127 aa11.65□□□□□ -0.54
CLSTN1-205ENST00000477264 LINC01600Q96MT4 127 aa11.65□□□□□ -0.54
CLSTN1-205ENST00000477264 GAGE2BQ13066 116 aa11.65□□□□□ -0.54
CLSTN1-205ENST00000477264 GAGE2EQ4V326 116 aa11.65□□□□□ -0.54
CLSTN1-205ENST00000477264 IGFL4Q6B9Z1 124 aa11.65□□□□□ -0.54
CLSTN1-205ENST00000477264 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.65□□□□□ -0.54
CLSTN1-205ENST00000477264 GAGE2DQ9UEU5 116 aa11.65□□□□□ -0.54
CLSTN1-205ENST00000477264 LENEPQ9Y5L5 61 aa11.65□□□□□ -0.54
CLSTN1-205ENST00000477264 PRAC2D3DTV9 90 aa11.64□□□□□ -0.55
CLSTN1-205ENST00000477264 SLC25A20O43772 301 aa11.64□□□□□ -0.55
CLSTN1-205ENST00000477264 CTSGP08311 255 aa11.64□□□□□ -0.55
CLSTN1-205ENST00000477264 DPH3P1Q9H4G8 78 aa11.64□□□□□ -0.55
CLSTN1-205ENST00000477264 UBTD1Q9HAC8 227 aa11.64□□□□□ -0.55
CLSTN1-205ENST00000477264 PRO1854Q9UHT4 67 aa11.64□□□□□ -0.55
CLSTN1-205ENST00000477264 LRBAP50851 2863 aa11.64□□□□□ -0.55
CLSTN1-205ENST00000477264 H3BVH4 76 aa11.64□□□□□ -0.55
CLSTN1-205ENST00000477264 C11orf71Q6IPW1 123 aa11.64□□□□□ -0.55
CLSTN1-205ENST00000477264 C9orf47Q6ZRZ4 202 aa11.64□□□□□ -0.55
CLSTN1-205ENST00000477264 FAM110AQ9BQ89 295 aa11.64□□□□□ -0.55
CLSTN1-205ENST00000477264 AGPAT4-IT1Q9H0P7 198 aa11.64□□□□□ -0.55
CLSTN1-205ENST00000477264 DPM3Q9P2X0 92 aa11.64□□□□□ -0.55
CLSTN1-205ENST00000477264 IGHV3-30P01768 117 aa11.63□□□□□ -0.55
CLSTN1-205ENST00000477264 IGHV3-30-5P0DP03 117 aa11.63□□□□□ -0.55
CLSTN1-205ENST00000477264 MED14OSP0DP75 135 aa11.63□□□□□ -0.55
CLSTN1-205ENST00000477264 NDUFV3P56181 108 aaKnown RBP11.63□□□□□ -0.55
CLSTN1-205ENST00000477264 RPL32P62910 135 aaKnown RBP11.63□□□□□ -0.55
CLSTN1-205ENST00000477264 TIMD4Q96H15 378 aa11.63□□□□□ -0.55
CLSTN1-205ENST00000477264 ZNF462Q96JM2 2506 aa11.63□□□□□ -0.55
CLSTN1-205ENST00000477264 GAGE12JA6NER3 117 aa11.62□□□□□ -0.55
CLSTN1-205ENST00000477264 GAGE7O76087 117 aa11.62□□□□□ -0.55
CLSTN1-205ENST00000477264 NHLRC4P0CG21 123 aaPredicted RBP11.62□□□□□ -0.55
CLSTN1-205ENST00000477264 CFC1BP0CG36 223 aa11.62□□□□□ -0.55
CLSTN1-205ENST00000477264 CFC1P0CG37 223 aa11.62□□□□□ -0.55
CLSTN1-205ENST00000477264 GAGE12FP0CL80 117 aa11.62□□□□□ -0.55
CLSTN1-205ENST00000477264 GAGE12GP0CL81 117 aa11.62□□□□□ -0.55
CLSTN1-205ENST00000477264 GAGE12IP0CL82 117 aa11.62□□□□□ -0.55
CLSTN1-205ENST00000477264 P0DMU3 169 aa11.62□□□□□ -0.55
CLSTN1-205ENST00000477264 FAM231AP0DMU4 169 aa11.62□□□□□ -0.55
CLSTN1-205ENST00000477264 FAM231CP0DMU5 169 aa11.62□□□□□ -0.55
CLSTN1-205ENST00000477264 GAGE4Q13068 117 aa11.62□□□□□ -0.55
CLSTN1-205ENST00000477264 KLK15Q9H2R5 256 aa11.62□□□□□ -0.55
CLSTN1-205ENST00000477264 ONECUT1Q9UBC0 465 aa11.62□□□□□ -0.55
CLSTN1-205ENST00000477264 A0A1W2PPR1 153 aa11.62□□□□□ -0.55
CLSTN1-205ENST00000477264 B5MCH6 92 aa11.62□□□□□ -0.55
CLSTN1-205ENST00000477264 BUB3O43684 328 aa11.62□□□□□ -0.55
CLSTN1-205ENST00000477264 SLC25A29Q8N8R3 303 aa11.62□□□□□ -0.55
CLSTN1-205ENST00000477264 HRNRQ86YZ3 2850 aaPredicted RBP11.62□□□□□ -0.55
CLSTN1-205ENST00000477264 LYNX1G3V0Z9 82 aa11.61□□□□□ -0.55
CLSTN1-205ENST00000477264 LYNX1P0DP58 116 aa11.61□□□□□ -0.55
CLSTN1-205ENST00000477264 DLX1P56177 255 aa11.61□□□□□ -0.55
CLSTN1-205ENST00000477264 MYO18BQ8IUG5 2567 aa11.61□□□□□ -0.55
CLSTN1-205ENST00000477264 TRAV8-2A0A0B4J237 113 aa11.61□□□□□ -0.55
CLSTN1-205ENST00000477264 C11orf86A6NJI1 115 aa11.61□□□□□ -0.55
CLSTN1-205ENST00000477264 SFTA2Q6UW10 78 aa11.61□□□□□ -0.55
CLSTN1-205ENST00000477264 AJUBAQ96IF1 538 aa11.61□□□□□ -0.55
CLSTN1-205ENST00000477264 RAX2Q96IS3 184 aa11.61□□□□□ -0.55
CLSTN1-205ENST00000477264 KIR2DL4Q99706 377 aa11.61□□□□□ -0.55
CLSTN1-205ENST00000477264 ZFAND3Q9H8U3 227 aa11.61□□□□□ -0.55
CLSTN1-205ENST00000477264 FLNCQ14315 2725 aa11.6□□□□□ -0.55
CLSTN1-205ENST00000477264 A0A0B4J2C4 111 aa11.6□□□□□ -0.55
CLSTN1-205ENST00000477264 CLEC3BP05452 202 aa11.6□□□□□ -0.55
CLSTN1-205ENST00000477264 IFITM1P13164 125 aa11.6□□□□□ -0.55
CLSTN1-205ENST00000477264 MRPL23Q16540 153 aaKnown RBP11.6□□□□□ -0.55
CLSTN1-205ENST00000477264 RNF182Q8N6D2 247 aa11.6□□□□□ -0.55
CLSTN1-205ENST00000477264 DOPEY1Q5JWR5 2465 aa11.6□□□□□ -0.55
CLSTN1-205ENST00000477264 IGLV4-69A0A075B6H9 119 aa11.6□□□□□ -0.55
CLSTN1-205ENST00000477264 TTC32Q5I0X7 151 aa11.6□□□□□ -0.55
CLSTN1-205ENST00000477264 TMEM141Q96I45 108 aa11.6□□□□□ -0.55
CLSTN1-205ENST00000477264 RPL13AP40429 203 aaKnown RBP11.59□□□□□ -0.55
CLSTN1-205ENST00000477264 PMVKQ15126 192 aa11.59□□□□□ -0.55
CLSTN1-205ENST00000477264 KLK9Q2XQG4 91 aa11.59□□□□□ -0.55
CLSTN1-205ENST00000477264 KLK9Q9UKQ9 250 aa11.59□□□□□ -0.55
CLSTN1-205ENST00000477264 TRBV7-9A0A0J9YWB2 115 aa11.58□□□□□ -0.56
CLSTN1-205ENST00000477264 C9JAW5 83 aa11.58□□□□□ -0.56
CLSTN1-205ENST00000477264 RNF223E7ERA6 249 aa11.58□□□□□ -0.56
CLSTN1-205ENST00000477264 LY6G5BQ8NDX9 201 aa11.58□□□□□ -0.56
CLSTN1-205ENST00000477264 LINC01548A6NM66 108 aa11.58□□□□□ -0.56
CLSTN1-205ENST00000477264 LY6HO94772 140 aa11.58□□□□□ -0.56
CLSTN1-205ENST00000477264 IGHV3-23P01764 117 aa11.58□□□□□ -0.56
CLSTN1-205ENST00000477264 NDPQ00604 133 aa11.58□□□□□ -0.56
CLSTN1-205ENST00000477264 PRB3Q04118 309 aaPredicted RBP11.58□□□□□ -0.56
CLSTN1-205ENST00000477264 HES1Q14469 280 aa11.58□□□□□ -0.56
CLSTN1-205ENST00000477264 CRYGDP07320 174 aa11.57□□□□□ -0.56
CLSTN1-205ENST00000477264 ATXN8Q156A1 80 aa11.57□□□□□ -0.56
CLSTN1-205ENST00000477264 POM121L12Q8N7R1 296 aa11.57□□□□□ -0.56
CLSTN1-205ENST00000477264 KLHL30-AS1Q8NEE0 82 aa11.57□□□□□ -0.56
CLSTN1-205ENST00000477264 TIMM17AQ99595 171 aa11.57□□□□□ -0.56
CLSTN1-205ENST00000477264 USP9XQ93008 2570 aaPredicted RBP11.57□□□□□ -0.56
CLSTN1-205ENST00000477264 OOSP1A8MZH6 123 aa11.57□□□□□ -0.56
CLSTN1-205ENST00000477264 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.56□□□□□ -0.56
CLSTN1-205ENST00000477264 ODF3BA8MYP8 253 aa11.56□□□□□ -0.56
CLSTN1-205ENST00000477264 IGHV3-33P01772 117 aa11.56□□□□□ -0.56
CLSTN1-205ENST00000477264 FAM110DQ8TAY7 271 aaPredicted RBP11.56□□□□□ -0.56
CLSTN1-205ENST00000477264 RPL39LQ96EH5 51 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms