RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 TRBV6-4A0A1B0GX49 114 aa4.68□□□□□ -1.66
HDAC3-207ENST00000475549 TAAR5O14804 337 aa4.68□□□□□ -1.66
HDAC3-207ENST00000475549 INAFM2P0DMQ5 153 aa4.68□□□□□ -1.66
HDAC3-207ENST00000475549 GCSHP23434 173 aa4.68□□□□□ -1.66
HDAC3-207ENST00000475549 CRIP1P50238 77 aa4.68□□□□□ -1.66
HDAC3-207ENST00000475549 FLI1Q01543 452 aaPredicted RBP4.68□□□□□ -1.66
HDAC3-207ENST00000475549 ZNF506Q5JVG8 444 aa4.68□□□□□ -1.66
HDAC3-207ENST00000475549 Q5VSD8 79 aa4.68□□□□□ -1.66
HDAC3-207ENST00000475549 UFSP1Q6NVU6 142 aa4.68□□□□□ -1.66
HDAC3-207ENST00000475549 SH2D6Q7Z4S9 175 aa4.68□□□□□ -1.66
HDAC3-207ENST00000475549 PRNTQ86SH4 94 aa4.68□□□□□ -1.66
HDAC3-207ENST00000475549 NHLRC2Q8NBF2 726 aa4.68□□□□□ -1.66
HDAC3-207ENST00000475549 PTH2Q96A98 100 aa4.68□□□□□ -1.66
HDAC3-207ENST00000475549 PSMG3Q9BT73 122 aaPredicted RBP4.68□□□□□ -1.66
HDAC3-207ENST00000475549 JPT2Q9H910 190 aa4.68□□□□□ -1.66
HDAC3-207ENST00000475549 FAM30AQ9NZY2 134 aa4.68□□□□□ -1.66
HDAC3-207ENST00000475549 EPDR1Q9UM22 224 aa4.68□□□□□ -1.66
HDAC3-207ENST00000475549 SERTM2A0A1B0GWG4 89 aa4.67□□□□□ -1.66
HDAC3-207ENST00000475549 RNF222A6NCQ9 220 aa4.67□□□□□ -1.66
HDAC3-207ENST00000475549 FAM229AH3BQW9 127 aa4.67□□□□□ -1.66
HDAC3-207ENST00000475549 IGHV3-30P01768 117 aa4.67□□□□□ -1.66
HDAC3-207ENST00000475549 IGHV3-33P01772 117 aa4.67□□□□□ -1.66
HDAC3-207ENST00000475549 LINC00694P0DN24 101 aa4.67□□□□□ -1.66
HDAC3-207ENST00000475549 IGHV3-30-3P0DP02 117 aa4.67□□□□□ -1.66
HDAC3-207ENST00000475549 IGHV3-30-5P0DP03 117 aa4.67□□□□□ -1.66
HDAC3-207ENST00000475549 SERF2P84101 59 aa4.67□□□□□ -1.66
HDAC3-207ENST00000475549 WFDC2Q14508 124 aa4.67□□□□□ -1.66
HDAC3-207ENST00000475549 RPL7L1Q6DKI1 246 aaKnown RBP4.67□□□□□ -1.66
HDAC3-207ENST00000475549 C10orf126Q8N4M7 172 aa4.67□□□□□ -1.66
HDAC3-207ENST00000475549 SAMD10Q9BYL1 202 aa4.67□□□□□ -1.66
HDAC3-207ENST00000475549 GTSF1LQ9H1H1 148 aa4.67□□□□□ -1.66
HDAC3-207ENST00000475549 TNFSF18Q9UNG2 199 aa4.67□□□□□ -1.66
HDAC3-207ENST00000475549 IGLV5-52A0A0A0MRZ9 124 aa4.66□□□□□ -1.66
HDAC3-207ENST00000475549 G3V3Q6 166 aa4.66□□□□□ -1.66
HDAC3-207ENST00000475549 CXorf1O96002 111 aa4.66□□□□□ -1.66
HDAC3-207ENST00000475549 PPT1P50897 306 aa4.66□□□□□ -1.66
HDAC3-207ENST00000475549 RHOHQ15669 191 aa4.66□□□□□ -1.66
HDAC3-207ENST00000475549 SMUG1Q53HV7 270 aa4.66□□□□□ -1.66
HDAC3-207ENST00000475549 OR10J3Q5JRS4 329 aa4.66□□□□□ -1.66
HDAC3-207ENST00000475549 SAPCD1Q5SSQ6 148 aa4.66□□□□□ -1.66
HDAC3-207ENST00000475549 LELP1Q5T871 98 aa4.66□□□□□ -1.66
HDAC3-207ENST00000475549 Q8N814 137 aa4.66□□□□□ -1.66
HDAC3-207ENST00000475549 CYB561D1Q8N8Q1 229 aa4.66□□□□□ -1.66
HDAC3-207ENST00000475549 ATP6V0E2Q8NHE4 81 aa4.66□□□□□ -1.66
HDAC3-207ENST00000475549 DNAJC30Q96LL9 226 aa4.66□□□□□ -1.66
HDAC3-207ENST00000475549 PRADC1Q9BSG0 188 aa4.66□□□□□ -1.66
HDAC3-207ENST00000475549 Q9HAA7 133 aa4.66□□□□□ -1.66
HDAC3-207ENST00000475549 TRAV8-6A0A0B4J262 113 aa4.65□□□□□ -1.67
HDAC3-207ENST00000475549 A0A1W2PRE2 83 aa4.65□□□□□ -1.67
HDAC3-207ENST00000475549 GAGE12JA6NER3 117 aa4.65□□□□□ -1.67
HDAC3-207ENST00000475549 CIDEAO60543 219 aa4.65□□□□□ -1.67
HDAC3-207ENST00000475549 MBP02144 154 aa4.65□□□□□ -1.67
HDAC3-207ENST00000475549 MGST1P10620 155 aaKnown RBP4.65□□□□□ -1.67
HDAC3-207ENST00000475549 GAGE1Q13065 139 aa4.65□□□□□ -1.67
HDAC3-207ENST00000475549 GAGE4Q13068 117 aa4.65□□□□□ -1.67
HDAC3-207ENST00000475549 GAGE5Q13069 117 aa4.65□□□□□ -1.67
HDAC3-207ENST00000475549 GAGE13Q4V321 117 aa4.65□□□□□ -1.67
HDAC3-207ENST00000475549 ZFP2Q6ZN57 461 aa4.65□□□□□ -1.67
HDAC3-207ENST00000475549 COX8CQ7Z4L0 72 aa4.65□□□□□ -1.67
HDAC3-207ENST00000475549 C14orf178Q8N769 122 aaPredicted RBP4.65□□□□□ -1.67
HDAC3-207ENST00000475549 OR2T35Q8NGX2 323 aa4.65□□□□□ -1.67
HDAC3-207ENST00000475549 NDFIP1Q9BT67 221 aa4.65□□□□□ -1.67
HDAC3-207ENST00000475549 ACTR3CQ9C0K3 210 aaPredicted RBP4.65□□□□□ -1.67
HDAC3-207ENST00000475549 MRPL18Q9H0U6 180 aaKnown RBP4.65□□□□□ -1.67
HDAC3-207ENST00000475549 MED28Q9H204 178 aa4.65□□□□□ -1.67
HDAC3-207ENST00000475549 PARLQ9H300 379 aa4.65□□□□□ -1.67
HDAC3-207ENST00000475549 CYTL1Q9NRR1 136 aa4.65□□□□□ -1.67
HDAC3-207ENST00000475549 TMEM167BQ9NRX6 74 aa4.65□□□□□ -1.67
HDAC3-207ENST00000475549 ARL2-SNX15V9GYD0 113 aa4.65□□□□□ -1.67
HDAC3-207ENST00000475549 VPS13BQ7Z7G8 4022 aa4.65□□□□□ -1.67
HDAC3-207ENST00000475549 DMBT1Q9UGM3 2413 aaPredicted RBP4.64□□□□□ -1.67
HDAC3-207ENST00000475549 FAM74A7A6NL05 159 aa4.64□□□□□ -1.67
HDAC3-207ENST00000475549 FABP5P3A8MUU1 101 aa4.64□□□□□ -1.67
HDAC3-207ENST00000475549 KRBOX1C9JBD0 128 aa4.64□□□□□ -1.67
HDAC3-207ENST00000475549 K7EQM0 130 aa4.64□□□□□ -1.67
HDAC3-207ENST00000475549 PSCAO43653 123 aa4.64□□□□□ -1.67
HDAC3-207ENST00000475549 PTTG1O95997 202 aa4.64□□□□□ -1.67
HDAC3-207ENST00000475549 GIPP09681 153 aaPredicted RBP4.64□□□□□ -1.67
HDAC3-207ENST00000475549 FGF8P55075 233 aaPredicted RBP4.64□□□□□ -1.67
HDAC3-207ENST00000475549 UBE2G2P60604 165 aa4.64□□□□□ -1.67
HDAC3-207ENST00000475549 PIK3CD-AS1Q5SR53 167 aa4.64□□□□□ -1.67
HDAC3-207ENST00000475549 DAZ4Q86SG3 579 aaKnown RBP4.64□□□□□ -1.67
HDAC3-207ENST00000475549 NTN5Q8WTR8 489 aaPredicted RBP4.64□□□□□ -1.67
HDAC3-207ENST00000475549 FRZBQ92765 325 aa4.64□□□□□ -1.67
HDAC3-207ENST00000475549 ZC2HC1AQ96GY0 325 aa4.64□□□□□ -1.67
HDAC3-207ENST00000475549 TMEM70Q9BUB7 260 aa4.64□□□□□ -1.67
HDAC3-207ENST00000475549 DAZ3Q9NR90 486 aaKnown RBP4.64□□□□□ -1.67
HDAC3-207ENST00000475549 FLG2Q5D862 2391 aaPredicted RBP4.63□□□□□ -1.67
HDAC3-207ENST00000475549 GRIFINA4D1Z8 144 aa4.63□□□□□ -1.67
HDAC3-207ENST00000475549 A8MWV9 139 aa4.63□□□□□ -1.67
HDAC3-207ENST00000475549 M0R036 132 aa4.63□□□□□ -1.67
HDAC3-207ENST00000475549 PEX7O00628 323 aa4.63□□□□□ -1.67
HDAC3-207ENST00000475549 LECT2O14960 151 aa4.63□□□□□ -1.67
HDAC3-207ENST00000475549 ARMS2P0C7Q2 107 aa4.63□□□□□ -1.67
HDAC3-207ENST00000475549 ASIPP42127 132 aa4.63□□□□□ -1.67
HDAC3-207ENST00000475549 FHITP49789 147 aa4.63□□□□□ -1.67
HDAC3-207ENST00000475549 LAGE3Q14657 143 aa4.63□□□□□ -1.67
HDAC3-207ENST00000475549 LGALSLQ3ZCW2 172 aaPredicted RBP4.63□□□□□ -1.67
HDAC3-207ENST00000475549 ZFP69Q49AA0 526 aa4.63□□□□□ -1.67
HDAC3-207ENST00000475549 LINC01620Q4KN68 170 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms