RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 UFSP1Q6NVU6 142 aa15.77■□□□□ 0.11
SMIM11A-204ENST00000474455 PRR25Q96S07 402 aa15.77■□□□□ 0.11
SMIM11A-204ENST00000474455 CITED2Q99967 270 aaPredicted RBP15.77■□□□□ 0.11
SMIM11A-204ENST00000474455 A0A1W2PRX2 142 aa15.76■□□□□ 0.11
SMIM11A-204ENST00000474455 CACNG7P62955 275 aa15.76■□□□□ 0.11
SMIM11A-204ENST00000474455 DUX3Q96PT4 197 aa15.76■□□□□ 0.11
SMIM11A-204ENST00000474455 IGLC6P0CF74 106 aa15.76■□□□□ 0.11
SMIM11A-204ENST00000474455 CKS2P33552 79 aa15.76■□□□□ 0.11
SMIM11A-204ENST00000474455 FER1L6-AS1Q8NA97 138 aa15.76■□□□□ 0.11
SMIM11A-204ENST00000474455 IGHV4OR15-8A0A075B7B6 117 aa15.75■□□□□ 0.11
SMIM11A-204ENST00000474455 A0A087WW49 117 aa15.75■□□□□ 0.11
SMIM11A-204ENST00000474455 LGALS1P09382 135 aaKnown RBP15.75■□□□□ 0.11
SMIM11A-204ENST00000474455 UNQ9165/PRO28630Q6UXU0 137 aa15.75■□□□□ 0.11
SMIM11A-204ENST00000474455 ASCL2Q99929 193 aa15.75■□□□□ 0.11
SMIM11A-204ENST00000474455 ZFAND3Q9H8U3 227 aa15.75■□□□□ 0.11
SMIM11A-204ENST00000474455 ZNF207O43670 478 aaKnown RBP15.74■□□□□ 0.11
SMIM11A-204ENST00000474455 KRTAP24-1Q3LI83 254 aa15.74■□□□□ 0.11
SMIM11A-204ENST00000474455 KLHL30-AS1Q8NEE0 82 aa15.74■□□□□ 0.11
SMIM11A-204ENST00000474455 CNFNQ9BYD5 112 aa15.74■□□□□ 0.11
SMIM11A-204ENST00000474455 MAP1LC3AQ9H492 121 aa15.74■□□□□ 0.11
SMIM11A-204ENST00000474455 TMSB15BA0A087X1C1 80 aa15.73■□□□□ 0.11
SMIM11A-204ENST00000474455 K7EP34 96 aa15.73■□□□□ 0.11
SMIM11A-204ENST00000474455 ADAMTSL5Q6ZMM2 481 aa15.73■□□□□ 0.11
SMIM11A-204ENST00000474455 C8orf86Q6ZUL3 223 aa15.73■□□□□ 0.11
SMIM11A-204ENST00000474455 ATP6V0BQ99437 205 aa15.73■□□□□ 0.11
SMIM11A-204ENST00000474455 SNAI2O43623 268 aa15.72■□□□□ 0.11
SMIM11A-204ENST00000474455 TWIST1Q15672 202 aa15.72■□□□□ 0.11
SMIM11A-204ENST00000474455 NPYP01303 97 aa15.71■□□□□ 0.11
SMIM11A-204ENST00000474455 EDN2P20800 178 aa15.71■□□□□ 0.11
SMIM11A-204ENST00000474455 TRRAPQ9Y4A5 3859 aa15.71■□□□□ 0.11
SMIM11A-204ENST00000474455 KIR3DS1Q14943 382 aa15.71■□□□□ 0.11
SMIM11A-204ENST00000474455 OR11H1Q8NG94 326 aa15.71■□□□□ 0.11
SMIM11A-204ENST00000474455 C4orf3Q8WVX3 66 aa15.71■□□□□ 0.11
SMIM11A-204ENST00000474455 NXT2Q9NPJ8 142 aaKnown RBP15.71■□□□□ 0.11
SMIM11A-204ENST00000474455 HIGD1BQ9P298 99 aa15.71■□□□□ 0.11
SMIM11A-204ENST00000474455 IGHV3OR16-13A0A075B7E8 117 aa15.7■□□□□ 0.1
SMIM11A-204ENST00000474455 IGKV2-40A0A087WW87 121 aaPredicted RBP15.7■□□□□ 0.1
SMIM11A-204ENST00000474455 IGHV3-49A0A0A0MS15 119 aa15.7■□□□□ 0.1
SMIM11A-204ENST00000474455 IGHV3-74A0A0B4J1X5 117 aa15.7■□□□□ 0.1
SMIM11A-204ENST00000474455 IGKV2D-40P01614 121 aaPredicted RBP15.7■□□□□ 0.1
SMIM11A-204ENST00000474455 OR5A1Q8NGJ0 315 aa15.7■□□□□ 0.1
SMIM11A-204ENST00000474455 FCER1GP30273 86 aa15.69■□□□□ 0.1
SMIM11A-204ENST00000474455 SLURP1P55000 103 aa15.69■□□□□ 0.1
SMIM11A-204ENST00000474455 ZMAT4Q9H898 229 aa15.69■□□□□ 0.1
SMIM11A-204ENST00000474455 ADARB2-AS1A8MUL3 147 aa15.69■□□□□ 0.1
SMIM11A-204ENST00000474455 SMPXQ9UHP9 88 aa15.69■□□□□ 0.1
SMIM11A-204ENST00000474455 TSSC4Q9Y5U2 329 aaPredicted RBP15.69■□□□□ 0.1
SMIM11A-204ENST00000474455 IGHV3-66A0A0C4DH42 116 aa15.68■□□□□ 0.1
SMIM11A-204ENST00000474455 FABP5P3A8MUU1 101 aa15.68■□□□□ 0.1
SMIM11A-204ENST00000474455 NDUFA4O00483 81 aa15.68■□□□□ 0.1
SMIM11A-204ENST00000474455 WFDC12Q8WWY7 111 aa15.68■□□□□ 0.1
SMIM11A-204ENST00000474455 SELENOKQ9Y6D0 94 aa15.68■□□□□ 0.1
SMIM11A-204ENST00000474455 HOXD3P31249 432 aaPredicted RBP15.67■□□□□ 0.1
SMIM11A-204ENST00000474455 NSUN5P1Q3KNT7 163 aa15.67■□□□□ 0.1
SMIM11A-204ENST00000474455 OR2K2Q8NGT1 345 aa15.67■□□□□ 0.1
SMIM11A-204ENST00000474455 RNF185Q96GF1 192 aa15.67■□□□□ 0.1
SMIM11A-204ENST00000474455 RAX2Q96IS3 184 aa15.67■□□□□ 0.1
SMIM11A-204ENST00000474455 RBAKDNA6NC62 111 aa15.67■□□□□ 0.1
SMIM11A-204ENST00000474455 H3BUT2 72 aa15.67■□□□□ 0.1
SMIM11A-204ENST00000474455 HLA-DRB4P13762 266 aa15.67■□□□□ 0.1
SMIM11A-204ENST00000474455 TM4SF20Q53R12 229 aa15.67■□□□□ 0.1
SMIM11A-204ENST00000474455 HLA-DRB4X5D2U9 266 aa15.67■□□□□ 0.1
SMIM11A-204ENST00000474455 ZNF80P51504 273 aaPredicted RBP15.66■□□□□ 0.1
SMIM11A-204ENST00000474455 SYNJ2BPP57105 145 aa15.66■□□□□ 0.1
SMIM11A-204ENST00000474455 CSTL1Q9H114 145 aa15.66■□□□□ 0.1
SMIM11A-204ENST00000474455 SMKR1H3BMG3 65 aa15.65■□□□□ 0.1
SMIM11A-204ENST00000474455 GPHB5Q86YW7 130 aa15.65■□□□□ 0.1
SMIM11A-204ENST00000474455 VGLL1Q99990 258 aa15.65■□□□□ 0.1
SMIM11A-204ENST00000474455 SMAD5-AS1Q9Y6J3 95 aa15.65■□□□□ 0.1
SMIM11A-204ENST00000474455 A0A1W2PPM0 123 aa15.65■□□□□ 0.1
SMIM11A-204ENST00000474455 LINC01619G3V211 115 aa15.65■□□□□ 0.1
SMIM11A-204ENST00000474455 ATP5LO75964 103 aa15.65■□□□□ 0.1
SMIM11A-204ENST00000474455 NMUP48645 174 aa15.65■□□□□ 0.1
SMIM11A-204ENST00000474455 VWFP04275 2813 aa15.63■□□□□ 0.09
SMIM11A-204ENST00000474455 ORM1P02763 201 aa15.63■□□□□ 0.09
SMIM11A-204ENST00000474455 SMIM13P0DJ93 91 aa15.63■□□□□ 0.09
SMIM11A-204ENST00000474455 EVI2AP22794 236 aa15.63■□□□□ 0.09
SMIM11A-204ENST00000474455 LEPP41159 167 aa15.63■□□□□ 0.09
SMIM11A-204ENST00000474455 ODF1Q14990 250 aa15.63■□□□□ 0.09
SMIM11A-204ENST00000474455 ZNF575Q86XF7 245 aa15.63■□□□□ 0.09
SMIM11A-204ENST00000474455 DKK2Q9UBU2 259 aa15.63■□□□□ 0.09
SMIM11A-204ENST00000474455 TNFRSF6BO95407 300 aa15.63■□□□□ 0.09
SMIM11A-204ENST00000474455 NEGR1Q7Z3B1 354 aa15.63■□□□□ 0.09
SMIM11A-204ENST00000474455 PCP2Q8IVA1 136 aa15.63■□□□□ 0.09
SMIM11A-204ENST00000474455 Q8N8P6 123 aa15.63■□□□□ 0.09
SMIM11A-204ENST00000474455 DLX4Q92988 240 aaPredicted RBP15.63■□□□□ 0.09
SMIM11A-204ENST00000474455 STAB1Q9NY15 2570 aa15.63■□□□□ 0.09
SMIM11A-204ENST00000474455 G3V4G9 280 aa15.62■□□□□ 0.09
SMIM11A-204ENST00000474455 CCL24O00175 119 aa15.62■□□□□ 0.09
SMIM11A-204ENST00000474455 BUB3O43684 328 aa15.62■□□□□ 0.09
SMIM11A-204ENST00000474455 FABP2P12104 132 aa15.62■□□□□ 0.09
SMIM11A-204ENST00000474455 Q8TAT8 98 aa15.62■□□□□ 0.09
SMIM11A-204ENST00000474455 METTL26Q96S19 204 aa15.62■□□□□ 0.09
SMIM11A-204ENST00000474455 SLC50A1Q9BRV3 221 aa15.62■□□□□ 0.09
SMIM11A-204ENST00000474455 COL6A5A8TX70 2615 aa15.62■□□□□ 0.09
SMIM11A-204ENST00000474455 PRSS47A8MTI9 375 aa15.61■□□□□ 0.09
SMIM11A-204ENST00000474455 FXYD7P58549 80 aa15.61■□□□□ 0.09
SMIM11A-204ENST00000474455 IGKCP01834 107 aa15.61■□□□□ 0.09
SMIM11A-204ENST00000474455 SMIM17P0DL12 118 aa15.61■□□□□ 0.09
SMIM11A-204ENST00000474455 PRB4P10163 310 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms