RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 DAZAP1Q96EP5 407 aaKnown RBP9.95□□□□□ -0.82
BRCA1-211ENST00000472490 HHLA3Q9XRX5 114 aa9.95□□□□□ -0.82
BRCA1-211ENST00000472490 KMT2CQ8NEZ4 4911 aaKnown RBP9.94□□□□□ -0.82
BRCA1-211ENST00000472490 A0A0J9YY99 117 aa9.94□□□□□ -0.82
BRCA1-211ENST00000472490 PAX4O43316 350 aa9.94□□□□□ -0.82
BRCA1-211ENST00000472490 NDUFS6O75380 124 aaKnown RBP9.94□□□□□ -0.82
BRCA1-211ENST00000472490 MGST1P10620 155 aaKnown RBP9.94□□□□□ -0.82
BRCA1-211ENST00000472490 CCL18P55774 89 aa9.94□□□□□ -0.82
BRCA1-211ENST00000472490 FAM3BP58499 235 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-211ENST00000472490 RAB19A4D1S5 217 aa9.93□□□□□ -0.82
BRCA1-211ENST00000472490 CXCL1P09341 107 aa9.93□□□□□ -0.82
BRCA1-211ENST00000472490 FHL2Q14192 279 aa9.93□□□□□ -0.82
BRCA1-211ENST00000472490 ZNF479Q96JC4 524 aa9.93□□□□□ -0.82
BRCA1-211ENST00000472490 FAM210AQ96ND0 272 aa9.93□□□□□ -0.82
BRCA1-211ENST00000472490 PHLDA3Q9Y5J5 127 aa9.93□□□□□ -0.82
BRCA1-211ENST00000472490 TMSB15BA0A087X1C1 80 aa9.92□□□□□ -0.82
BRCA1-211ENST00000472490 A8MWV9 139 aa9.92□□□□□ -0.82
BRCA1-211ENST00000472490 H3BVH4 76 aa9.92□□□□□ -0.82
BRCA1-211ENST00000472490 SFTA3P0C7M3 94 aa9.92□□□□□ -0.82
BRCA1-211ENST00000472490 ARMS2P0C7Q2 107 aa9.92□□□□□ -0.82
BRCA1-211ENST00000472490 MED14OSP0DP75 135 aa9.92□□□□□ -0.82
BRCA1-211ENST00000472490 CRYBA4P53673 196 aa9.92□□□□□ -0.82
BRCA1-211ENST00000472490 TOR2AQ5JU69 321 aa9.92□□□□□ -0.82
BRCA1-211ENST00000472490 ICOSQ9Y6W8 199 aa9.92□□□□□ -0.82
BRCA1-211ENST00000472490 XKRY2A2RUG3 117 aa9.91□□□□□ -0.82
BRCA1-211ENST00000472490 GRIFINA4D1Z8 144 aa9.91□□□□□ -0.82
BRCA1-211ENST00000472490 PGPEP1LA6NFU8 196 aa9.91□□□□□ -0.82
BRCA1-211ENST00000472490 RS1O15537 224 aa9.91□□□□□ -0.82
BRCA1-211ENST00000472490 PCNPQ8WW12 178 aaKnown RBP9.91□□□□□ -0.82
BRCA1-211ENST00000472490 VSIG2Q96IQ7 327 aa9.91□□□□□ -0.82
BRCA1-211ENST00000472490 P01737 135 aa9.9□□□□□ -0.82
BRCA1-211ENST00000472490 RPS20P60866 119 aaKnown RBP9.9□□□□□ -0.82
BRCA1-211ENST00000472490 MRPL23Q16540 153 aaKnown RBP9.9□□□□□ -0.82
BRCA1-211ENST00000472490 CFAP126Q5VTH2 177 aa9.9□□□□□ -0.82
BRCA1-211ENST00000472490 ZFP82Q8N141 532 aa9.9□□□□□ -0.82
BRCA1-211ENST00000472490 PARLQ9H300 379 aa9.9□□□□□ -0.82
BRCA1-211ENST00000472490 SCRT2Q9NQ03 307 aa9.9□□□□□ -0.82
BRCA1-211ENST00000472490 TENM2Q9NT68 2774 aa9.9□□□□□ -0.83
BRCA1-211ENST00000472490 TRBV20OR9-2A0A075B6H5 130 aa9.89□□□□□ -0.83
BRCA1-211ENST00000472490 IGLV2-8P01709 118 aa9.89□□□□□ -0.83
BRCA1-211ENST00000472490 CEBPGP53567 150 aa9.89□□□□□ -0.83
BRCA1-211ENST00000472490 RAB14P61106 215 aa9.89□□□□□ -0.83
BRCA1-211ENST00000472490 ZFP2Q6ZN57 461 aa9.89□□□□□ -0.83
BRCA1-211ENST00000472490 A0A096LPF7 62 aa9.88□□□□□ -0.83
BRCA1-211ENST00000472490 TRBV6-4A0A1B0GX49 114 aa9.88□□□□□ -0.83
BRCA1-211ENST00000472490 M0R381 172 aa9.88□□□□□ -0.83
BRCA1-211ENST00000472490 RHODO00212 210 aa9.88□□□□□ -0.83
BRCA1-211ENST00000472490 RPL19P84098 196 aaKnown RBP9.88□□□□□ -0.83
BRCA1-211ENST00000472490 SH2D6Q7Z4S9 175 aa9.88□□□□□ -0.83
BRCA1-211ENST00000472490 LINC00528Q8N1L1 170 aa9.88□□□□□ -0.83
BRCA1-211ENST00000472490 OR2D3Q8NGH3 330 aa9.88□□□□□ -0.83
BRCA1-211ENST00000472490 PRADC1Q9BSG0 188 aa9.88□□□□□ -0.83
BRCA1-211ENST00000472490 SMDT1Q9H4I9 107 aa9.88□□□□□ -0.83
BRCA1-211ENST00000472490 C19orf71A6NCJ1 209 aa9.87□□□□□ -0.83
BRCA1-211ENST00000472490 OR5AL1P0C617 328 aa9.87□□□□□ -0.83
BRCA1-211ENST00000472490 GATA1P15976 413 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-211ENST00000472490 SRIP30626 198 aa9.87□□□□□ -0.83
BRCA1-211ENST00000472490 PEA15Q15121 130 aa9.87□□□□□ -0.83
BRCA1-211ENST00000472490 RHOHQ15669 191 aa9.87□□□□□ -0.83
BRCA1-211ENST00000472490 SPANXN1Q5VSR9 72 aa9.87□□□□□ -0.83
BRCA1-211ENST00000472490 NEGR1Q7Z3B1 354 aa9.87□□□□□ -0.83
BRCA1-211ENST00000472490 ZNF575Q86XF7 245 aa9.87□□□□□ -0.83
BRCA1-211ENST00000472490 LY96Q9Y6Y9 160 aa9.87□□□□□ -0.83
BRCA1-211ENST00000472490 K7EQD1 137 aa9.86□□□□□ -0.83
BRCA1-211ENST00000472490 SNAI2O43623 268 aa9.86□□□□□ -0.83
BRCA1-211ENST00000472490 GYPEP15421 78 aa9.86□□□□□ -0.83
BRCA1-211ENST00000472490 C4orf48Q5BLP8 95 aa9.86□□□□□ -0.83
BRCA1-211ENST00000472490 OCC1Q8TAD7 63 aa9.86□□□□□ -0.83
BRCA1-211ENST00000472490 SMIM7Q9BQ49 75 aa9.86□□□□□ -0.83
BRCA1-211ENST00000472490 SSBP4Q9BWG4 385 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-211ENST00000472490 LINC00588Q9Y4M8 146 aa9.86□□□□□ -0.83
BRCA1-211ENST00000472490 IGHV3-73A0A0B4J1V6 119 aa9.85□□□□□ -0.83
BRCA1-211ENST00000472490 A0A1W2PPQ1 181 aa9.85□□□□□ -0.83
BRCA1-211ENST00000472490 ZNF727A8MUV8 499 aa9.85□□□□□ -0.83
BRCA1-211ENST00000472490 F2Z2F3 143 aa9.85□□□□□ -0.83
BRCA1-211ENST00000472490 LORP23490 312 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-211ENST00000472490 FAM74A3Q4VXF1 159 aa9.85□□□□□ -0.83
BRCA1-211ENST00000472490 SLC25A29Q8N8R3 303 aa9.85□□□□□ -0.83
BRCA1-211ENST00000472490 FER1L6-AS1Q8NA97 138 aa9.85□□□□□ -0.83
BRCA1-211ENST00000472490 SFRP2Q96HF1 295 aa9.85□□□□□ -0.83
BRCA1-211ENST00000472490 NXPH4O95158 308 aa9.84□□□□□ -0.83
BRCA1-211ENST00000472490 SRP19P09132 144 aaKnown RBP9.84□□□□□ -0.83
BRCA1-211ENST00000472490 ESRGQ1W209 222 aa9.84□□□□□ -0.83
BRCA1-211ENST00000472490 FAM74A4Q5TZK3 123 aa9.84□□□□□ -0.83
BRCA1-211ENST00000472490 NUDT10Q8NFP7 164 aa9.84□□□□□ -0.83
BRCA1-211ENST00000472490 NUDT11Q96G61 164 aa9.84□□□□□ -0.83
BRCA1-211ENST00000472490 UPK3BQ9BT76 320 aa9.84□□□□□ -0.83
BRCA1-211ENST00000472490 TPPP3Q9BW30 176 aa9.84□□□□□ -0.83
BRCA1-211ENST00000472490 RPP21Q9H633 154 aaKnown RBP9.84□□□□□ -0.83
BRCA1-211ENST00000472490 MRPS16Q9Y3D3 137 aaKnown RBP9.84□□□□□ -0.83
BRCA1-211ENST00000472490 K7EN84 100 aa9.83□□□□□ -0.84
BRCA1-211ENST00000472490 CACNG7P62955 275 aa9.83□□□□□ -0.84
BRCA1-211ENST00000472490 OR10AG1Q8NH19 301 aa9.83□□□□□ -0.84
BRCA1-211ENST00000472490 ZNRF2Q8NHG8 242 aa9.83□□□□□ -0.84
BRCA1-211ENST00000472490 Q9H8V8 135 aa9.83□□□□□ -0.84
BRCA1-211ENST00000472490 PLECQ15149 4684 aaKnown RBP9.83□□□□□ -0.84
BRCA1-211ENST00000472490 IGLV2-18A0A075B6J9 118 aa9.82□□□□□ -0.84
BRCA1-211ENST00000472490 IGLC6P0CF74 106 aa9.82□□□□□ -0.84
BRCA1-211ENST00000472490 SMIM17P0DL12 118 aa9.82□□□□□ -0.84
BRCA1-211ENST00000472490 ERVFC1-1P60608 527 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms