RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 SMDT1Q9H4I9 107 aa10.62□□□□□ -0.71
SNX13-205ENST00000471744 P0DMU3 169 aa10.61□□□□□ -0.71
SNX13-205ENST00000471744 FAM231AP0DMU4 169 aa10.61□□□□□ -0.71
SNX13-205ENST00000471744 FAM231CP0DMU5 169 aa10.61□□□□□ -0.71
SNX13-205ENST00000471744 HOXA5P20719 270 aa10.61□□□□□ -0.71
SNX13-205ENST00000471744 SYT8Q8NBV8 401 aa10.61□□□□□ -0.71
SNX13-205ENST00000471744 OR4C5Q8NGB2 326 aa10.61□□□□□ -0.71
SNX13-205ENST00000471744 DYNC2H1Q8NCM8 4307 aaKnown RBP10.6□□□□□ -0.71
SNX13-205ENST00000471744 TRAV26-1A0A087WT03 109 aa10.6□□□□□ -0.71
SNX13-205ENST00000471744 TMSB15BA0A087X1C1 80 aa10.6□□□□□ -0.71
SNX13-205ENST00000471744 XKRY2A2RUG3 117 aa10.6□□□□□ -0.71
SNX13-205ENST00000471744 GRIFINA4D1Z8 144 aa10.6□□□□□ -0.71
SNX13-205ENST00000471744 H3BVH4 76 aa10.6□□□□□ -0.71
SNX13-205ENST00000471744 LY6G6CO95867 125 aa10.6□□□□□ -0.71
SNX13-205ENST00000471744 ARMS2P0C7Q2 107 aa10.6□□□□□ -0.71
SNX13-205ENST00000471744 RPS20P60866 119 aaKnown RBP10.6□□□□□ -0.71
SNX13-205ENST00000471744 PEA15Q15121 130 aa10.6□□□□□ -0.71
SNX13-205ENST00000471744 PCNPQ8WW12 178 aaKnown RBP10.6□□□□□ -0.71
SNX13-205ENST00000471744 PRO0255Q9UI72 69 aa10.6□□□□□ -0.71
SNX13-205ENST00000471744 LY96Q9Y6Y9 160 aa10.6□□□□□ -0.71
SNX13-205ENST00000471744 RYR3Q15413 4870 aa10.59□□□□□ -0.71
SNX13-205ENST00000471744 TRGV4A0A0C4DH28 118 aa10.59□□□□□ -0.71
SNX13-205ENST00000471744 C19orf71A6NCJ1 209 aa10.59□□□□□ -0.71
SNX13-205ENST00000471744 P01737 135 aa10.59□□□□□ -0.71
SNX13-205ENST00000471744 IGHV3-53P01767 116 aa10.59□□□□□ -0.71
SNX13-205ENST00000471744 SRP19P09132 144 aaKnown RBP10.59□□□□□ -0.71
SNX13-205ENST00000471744 CEBPGP53567 150 aa10.59□□□□□ -0.71
SNX13-205ENST00000471744 SMIM7Q9BQ49 75 aa10.59□□□□□ -0.71
SNX13-205ENST00000471744 SCRT2Q9NQ03 307 aa10.59□□□□□ -0.71
SNX13-205ENST00000471744 PHLDA3Q9Y5J5 127 aa10.59□□□□□ -0.71
SNX13-205ENST00000471744 PGPEP1LA6NFU8 196 aa10.58□□□□□ -0.72
SNX13-205ENST00000471744 A8MWV9 139 aa10.58□□□□□ -0.72
SNX13-205ENST00000471744 RS1O15537 224 aa10.58□□□□□ -0.72
SNX13-205ENST00000471744 FHL2Q14192 279 aa10.58□□□□□ -0.72
SNX13-205ENST00000471744 FAM74A3Q4VXF1 159 aa10.58□□□□□ -0.72
SNX13-205ENST00000471744 ZFP82Q8N141 532 aa10.58□□□□□ -0.72
SNX13-205ENST00000471744 POM121L12Q8N7R1 296 aa10.58□□□□□ -0.72
SNX13-205ENST00000471744 ZNF479Q96JC4 524 aa10.58□□□□□ -0.72
SNX13-205ENST00000471744 HHLA3Q9XRX5 114 aa10.58□□□□□ -0.72
SNX13-205ENST00000471744 ZNF727A8MUV8 499 aa10.57□□□□□ -0.72
SNX13-205ENST00000471744 PAX4O43316 350 aa10.57□□□□□ -0.72
SNX13-205ENST00000471744 NUDT3O95989 172 aa10.57□□□□□ -0.72
SNX13-205ENST00000471744 SFTA3P0C7M3 94 aa10.57□□□□□ -0.72
SNX13-205ENST00000471744 RPL19P84098 196 aaKnown RBP10.57□□□□□ -0.72
SNX13-205ENST00000471744 ZNF575Q86XF7 245 aa10.57□□□□□ -0.72
SNX13-205ENST00000471744 OR2D3Q8NGH3 330 aa10.57□□□□□ -0.72
SNX13-205ENST00000471744 OCC1Q8TAD7 63 aa10.57□□□□□ -0.72
SNX13-205ENST00000471744 A0A0J9YY99 117 aa10.56□□□□□ -0.72
SNX13-205ENST00000471744 SNAI2O43623 268 aa10.56□□□□□ -0.72
SNX13-205ENST00000471744 OR5AL1P0C617 328 aa10.56□□□□□ -0.72
SNX13-205ENST00000471744 CRYBA4P53673 196 aa10.56□□□□□ -0.72
SNX13-205ENST00000471744 RNF212Q495C1 297 aa10.56□□□□□ -0.72
SNX13-205ENST00000471744 CFAP126Q5VTH2 177 aa10.56□□□□□ -0.72
SNX13-205ENST00000471744 SSBP4Q9BWG4 385 aaPredicted RBP10.56□□□□□ -0.72
SNX13-205ENST00000471744 PLECQ15149 4684 aaKnown RBP10.55□□□□□ -0.72
SNX13-205ENST00000471744 RHODO00212 210 aa10.55□□□□□ -0.72
SNX13-205ENST00000471744 CLLU1Q5K131 121 aa10.55□□□□□ -0.72
SNX13-205ENST00000471744 ZFP2Q6ZN57 461 aa10.55□□□□□ -0.72
SNX13-205ENST00000471744 UBE2DNLQ8IWF7 75 aa10.55□□□□□ -0.72
SNX13-205ENST00000471744 VSIG2Q96IQ7 327 aa10.55□□□□□ -0.72
SNX13-205ENST00000471744 ICOSQ9Y6W8 199 aa10.55□□□□□ -0.72
SNX13-205ENST00000471744 ALMS1Q8TCU4 4167 aa10.54□□□□□ -0.72
SNX13-205ENST00000471744 K7EN84 100 aa10.54□□□□□ -0.72
SNX13-205ENST00000471744 M0R381 172 aa10.54□□□□□ -0.72
SNX13-205ENST00000471744 CCL18P55774 89 aa10.54□□□□□ -0.72
SNX13-205ENST00000471744 FAM3BP58499 235 aaPredicted RBP10.54□□□□□ -0.72
SNX13-205ENST00000471744 FAM231DQ6ZW35 169 aa10.54□□□□□ -0.72
SNX13-205ENST00000471744 NUDT10Q8NFP7 164 aa10.54□□□□□ -0.72
SNX13-205ENST00000471744 NUDT11Q96G61 164 aa10.54□□□□□ -0.72
SNX13-205ENST00000471744 A0A1W2PPQ1 181 aa10.53□□□□□ -0.72
SNX13-205ENST00000471744 F2Z2F3 143 aa10.53□□□□□ -0.72
SNX13-205ENST00000471744 NXPH4O95158 308 aa10.53□□□□□ -0.72
SNX13-205ENST00000471744 GATA1P15976 413 aaPredicted RBP10.53□□□□□ -0.72
SNX13-205ENST00000471744 MRPL23Q16540 153 aaKnown RBP10.53□□□□□ -0.72
SNX13-205ENST00000471744 SPANXN1Q5VSR9 72 aa10.53□□□□□ -0.72
SNX13-205ENST00000471744 LINC01551Q86U37 167 aa10.53□□□□□ -0.72
SNX13-205ENST00000471744 FER1L6-AS1Q8NA97 138 aa10.53□□□□□ -0.72
SNX13-205ENST00000471744 RPP21Q9H633 154 aaKnown RBP10.53□□□□□ -0.72
SNX13-205ENST00000471744 TRBV6-4A0A1B0GX49 114 aa10.52□□□□□ -0.73
SNX13-205ENST00000471744 IGLC6P0CF74 106 aa10.52□□□□□ -0.73
SNX13-205ENST00000471744 IFITM2Q01629 132 aa10.52□□□□□ -0.73
SNX13-205ENST00000471744 RHOHQ15669 191 aa10.52□□□□□ -0.73
SNX13-205ENST00000471744 TMEM241Q24JQ0 296 aa10.52□□□□□ -0.73
SNX13-205ENST00000471744 SOHLH1Q5JUK2 328 aa10.52□□□□□ -0.73
SNX13-205ENST00000471744 OR10AG1Q8NH19 301 aa10.52□□□□□ -0.73
SNX13-205ENST00000471744 SFRP2Q96HF1 295 aa10.52□□□□□ -0.73
SNX13-205ENST00000471744 LYSTQ99698 3801 aa10.52□□□□□ -0.73
SNX13-205ENST00000471744 PRADC1Q9BSG0 188 aa10.52□□□□□ -0.73
SNX13-205ENST00000471744 RNASE7Q9H1E1 156 aaKnown RBP10.52□□□□□ -0.73
SNX13-205ENST00000471744 A0A096LPF7 62 aa10.51□□□□□ -0.73
SNX13-205ENST00000471744 GATCO43716 136 aaKnown RBP10.51□□□□□ -0.73
SNX13-205ENST00000471744 ERVFC1-1P60608 527 aa10.51□□□□□ -0.73
SNX13-205ENST00000471744 CACNG7P62955 275 aa10.51□□□□□ -0.73
SNX13-205ENST00000471744 SRSF3P84103 164 aaKnown RBP10.51□□□□□ -0.73
SNX13-205ENST00000471744 CT83Q5H943 113 aa10.51□□□□□ -0.73
SNX13-205ENST00000471744 SH2D6Q7Z4S9 175 aa10.51□□□□□ -0.73
SNX13-205ENST00000471744 NAT8Q9UHE5 227 aa10.51□□□□□ -0.73
SNX13-205ENST00000471744 A8MWL6 223 aa10.5□□□□□ -0.73
SNX13-205ENST00000471744 C9JQL5 133 aa10.5□□□□□ -0.73
SNX13-205ENST00000471744 GZMBP10144 247 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 584.5 ms