RNA–Protein interactions for RNA: ENST00000471477.1

COL15A1-203, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-203ENST00000471477 ZNF479Q96JC4 524 aa17.65■□□□□ 0.42
COL15A1-203ENST00000471477 TRAV4A0A0B4J268 109 aa17.64■□□□□ 0.42
COL15A1-203ENST00000471477 C19orf71A6NCJ1 209 aa17.64■□□□□ 0.42
COL15A1-203ENST00000471477 LY6G6CO95867 125 aa17.64■□□□□ 0.42
COL15A1-203ENST00000471477 RAB14P61106 215 aa17.64■□□□□ 0.42
COL15A1-203ENST00000471477 C15orf53Q8NAA6 179 aa17.64■□□□□ 0.42
COL15A1-203ENST00000471477 OCC1Q8TAD7 63 aa17.64■□□□□ 0.42
COL15A1-203ENST00000471477 PTH2Q96A98 100 aa17.64■□□□□ 0.42
COL15A1-203ENST00000471477 DAZAP1Q96EP5 407 aaKnown RBP17.64■□□□□ 0.42
COL15A1-203ENST00000471477 BIN3Q9NQY0 253 aa17.64■□□□□ 0.42
COL15A1-203ENST00000471477 A0A0J9YY99 117 aa17.64■□□□□ 0.41
COL15A1-203ENST00000471477 SRSF3P84103 164 aaKnown RBP17.64■□□□□ 0.41
COL15A1-203ENST00000471477 IFITM2Q01629 132 aa17.64■□□□□ 0.41
COL15A1-203ENST00000471477 OR4C5Q8NGB2 326 aa17.64■□□□□ 0.41
COL15A1-203ENST00000471477 K7EN84 100 aa17.63■□□□□ 0.41
COL15A1-203ENST00000471477 CXCL1P09341 107 aa17.63■□□□□ 0.41
COL15A1-203ENST00000471477 FHL2Q14192 279 aa17.63■□□□□ 0.41
COL15A1-203ENST00000471477 SMIM7Q9BQ49 75 aa17.63■□□□□ 0.41
COL15A1-203ENST00000471477 C9JQL5 133 aa17.62■□□□□ 0.41
COL15A1-203ENST00000471477 PEA15Q15121 130 aa17.62■□□□□ 0.41
COL15A1-203ENST00000471477 LGALS9CQ6DKI2 356 aa17.62■□□□□ 0.41
COL15A1-203ENST00000471477 SCRT2Q9NQ03 307 aa17.62■□□□□ 0.41
COL15A1-203ENST00000471477 TRGV4A0A0C4DH28 118 aa17.61■□□□□ 0.41
COL15A1-203ENST00000471477 NUDT3O95989 172 aa17.61■□□□□ 0.41
COL15A1-203ENST00000471477 P01737 135 aa17.61■□□□□ 0.41
COL15A1-203ENST00000471477 PHLDA3Q9Y5J5 127 aa17.61■□□□□ 0.41
COL15A1-203ENST00000471477 ZNF727A8MUV8 499 aa17.6■□□□□ 0.41
COL15A1-203ENST00000471477 OR2D3Q8NGH3 330 aa17.6■□□□□ 0.41
COL15A1-203ENST00000471477 VSIG2Q96IQ7 327 aa17.6■□□□□ 0.41
COL15A1-203ENST00000471477 RS1O15537 224 aa17.59■□□□□ 0.41
COL15A1-203ENST00000471477 MED14OSP0DP75 135 aa17.59■□□□□ 0.41
COL15A1-203ENST00000471477 CFAP126Q5VTH2 177 aa17.59■□□□□ 0.41
COL15A1-203ENST00000471477 DMRTA1Q5VZB9 504 aa17.59■□□□□ 0.41
COL15A1-203ENST00000471477 PRO0255Q9UI72 69 aa17.59■□□□□ 0.41
COL15A1-203ENST00000471477 VPS13DQ5THJ4 4388 aa17.58■□□□□ 0.41
COL15A1-203ENST00000471477 PIK3CD-AS1Q5SR53 167 aa17.58■□□□□ 0.41
COL15A1-203ENST00000471477 SYT8Q8NBV8 401 aa17.58■□□□□ 0.41
COL15A1-203ENST00000471477 NUDT10Q8NFP7 164 aa17.58■□□□□ 0.41
COL15A1-203ENST00000471477 NUDT11Q96G61 164 aa17.58■□□□□ 0.41
COL15A1-203ENST00000471477 RNASE7Q9H1E1 156 aaKnown RBP17.58■□□□□ 0.41
COL15A1-203ENST00000471477 SMDT1Q9H4I9 107 aa17.58■□□□□ 0.41
COL15A1-203ENST00000471477 HHLA3Q9XRX5 114 aa17.58■□□□□ 0.41
COL15A1-203ENST00000471477 RYR3Q15413 4870 aa17.58■□□□□ 0.4
COL15A1-203ENST00000471477 H3BNG1 76 aa17.57■□□□□ 0.4
COL15A1-203ENST00000471477 GZMBP10144 247 aa17.57■□□□□ 0.4
COL15A1-203ENST00000471477 CRYBA4P53673 196 aa17.57■□□□□ 0.4
COL15A1-203ENST00000471477 SLAQ13239 276 aa17.57■□□□□ 0.4
COL15A1-203ENST00000471477 CLLU1Q5K131 121 aa17.57■□□□□ 0.4
COL15A1-203ENST00000471477 LY96Q9Y6Y9 160 aa17.57■□□□□ 0.4
COL15A1-203ENST00000471477 M0R381 172 aa17.56■□□□□ 0.4
COL15A1-203ENST00000471477 PAX4O43316 350 aa17.56■□□□□ 0.4
COL15A1-203ENST00000471477 P0DMU3 169 aa17.56■□□□□ 0.4
COL15A1-203ENST00000471477 FAM231AP0DMU4 169 aa17.56■□□□□ 0.4
COL15A1-203ENST00000471477 FAM231CP0DMU5 169 aa17.56■□□□□ 0.4
COL15A1-203ENST00000471477 RPS20P60866 119 aaKnown RBP17.56■□□□□ 0.4
COL15A1-203ENST00000471477 SNAI2O43623 268 aa17.55■□□□□ 0.4
COL15A1-203ENST00000471477 ZFP82Q8N141 532 aa17.55■□□□□ 0.4
COL15A1-203ENST00000471477 JPT2Q9H910 190 aa17.55■□□□□ 0.4
COL15A1-203ENST00000471477 HYDINQ4G0P3 5121 aa17.55■□□□□ 0.4
COL15A1-203ENST00000471477 RYR2Q92736 4967 aa17.55■□□□□ 0.4
COL15A1-203ENST00000471477 IGHV3-73A0A0B4J1V6 119 aa17.55■□□□□ 0.4
COL15A1-203ENST00000471477 A8MWV9 139 aa17.55■□□□□ 0.4
COL15A1-203ENST00000471477 OR5AL1P0C617 328 aa17.55■□□□□ 0.4
COL15A1-203ENST00000471477 LINC01551Q86U37 167 aa17.55■□□□□ 0.4
COL15A1-203ENST00000471477 OR10AG1Q8NH19 301 aa17.55■□□□□ 0.4
COL15A1-203ENST00000471477 SSBP4Q9BWG4 385 aaPredicted RBP17.55■□□□□ 0.4
COL15A1-203ENST00000471477 KMT2AQ03164 3969 aa17.54■□□□□ 0.4
COL15A1-203ENST00000471477 FAM74A3Q4VXF1 159 aa17.54■□□□□ 0.4
COL15A1-203ENST00000471477 RPP21Q9H633 154 aaKnown RBP17.54■□□□□ 0.4
COL15A1-203ENST00000471477 MUC21A0A0G2JKD1 596 aa17.53■□□□□ 0.4
COL15A1-203ENST00000471477 MUC21A0A140T8X8 626 aa17.53■□□□□ 0.4
COL15A1-203ENST00000471477 XKRY2A2RUG3 117 aa17.53■□□□□ 0.4
COL15A1-203ENST00000471477 CIDEAO60543 219 aa17.53■□□□□ 0.4
COL15A1-203ENST00000471477 IGLC6P0CF74 106 aa17.53■□□□□ 0.4
COL15A1-203ENST00000471477 GATA1P15976 413 aaPredicted RBP17.53■□□□□ 0.4
COL15A1-203ENST00000471477 UBE2DNLQ8IWF7 75 aa17.52■□□□□ 0.4
COL15A1-203ENST00000471477 FER1L6-AS1Q8NA97 138 aa17.52■□□□□ 0.4
COL15A1-203ENST00000471477 TPPP3Q9BW30 176 aa17.52■□□□□ 0.4
COL15A1-203ENST00000471477 SAMD10Q9BYL1 202 aa17.52■□□□□ 0.4
COL15A1-203ENST00000471477 A0A096LPF7 62 aa17.51■□□□□ 0.39
COL15A1-203ENST00000471477 NXPH4O95158 308 aa17.51■□□□□ 0.39
COL15A1-203ENST00000471477 FAM231DQ6ZW35 169 aa17.51■□□□□ 0.39
COL15A1-203ENST00000471477 ERVFC1-1P60608 527 aa17.5■□□□□ 0.39
COL15A1-203ENST00000471477 TMEM241Q24JQ0 296 aa17.5■□□□□ 0.39
COL15A1-203ENST00000471477 SPANXN1Q5VSR9 72 aa17.5■□□□□ 0.39
COL15A1-203ENST00000471477 SFRP2Q96HF1 295 aa17.5■□□□□ 0.39
COL15A1-203ENST00000471477 ICOSQ9Y6W8 199 aa17.5■□□□□ 0.39
COL15A1-203ENST00000471477 GATCO43716 136 aaKnown RBP17.49■□□□□ 0.39
COL15A1-203ENST00000471477 SSTP61278 116 aa17.49■□□□□ 0.39
COL15A1-203ENST00000471477 SOHLH1Q5JUK2 328 aa17.49■□□□□ 0.39
COL15A1-203ENST00000471477 ZFP2Q6ZN57 461 aa17.49■□□□□ 0.39
COL15A1-203ENST00000471477 GYPEP15421 78 aa17.48■□□□□ 0.39
COL15A1-203ENST00000471477 FAM74A4Q5TZK3 123 aa17.48■□□□□ 0.39
COL15A1-203ENST00000471477 UFSP1Q6NVU6 142 aa17.48■□□□□ 0.39
COL15A1-203ENST00000471477 NAT8Q9UHE5 227 aa17.48■□□□□ 0.39
COL15A1-203ENST00000471477 A0A087WWL8 130 aa17.47■□□□□ 0.39
COL15A1-203ENST00000471477 RPL23P62829 140 aaKnown RBP17.47■□□□□ 0.39
COL15A1-203ENST00000471477 SLC25A29Q8N8R3 303 aa17.47■□□□□ 0.39
COL15A1-203ENST00000471477 DNAH6Q9C0G6 4158 aa17.47■□□□□ 0.39
COL15A1-203ENST00000471477 LOC100131303A0A0U1RQF7 123 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms