RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 MRPS12O15235 138 aaKnown RBP4.45□□□□□ -1.7
PTCD3-208ENST00000469585 DEFB4AO15263 64 aa4.45□□□□□ -1.7
PTCD3-208ENST00000469585 IGKV2D-40P01614 121 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-208ENST00000469585 S100A9P06702 114 aaKnown RBP4.45□□□□□ -1.7
PTCD3-208ENST00000469585 HTN3P15516 51 aa4.45□□□□□ -1.7
PTCD3-208ENST00000469585 HLA-DMBP28068 263 aa4.45□□□□□ -1.7
PTCD3-208ENST00000469585 TAGLN2P37802 199 aaKnown RBP4.45□□□□□ -1.7
PTCD3-208ENST00000469585 Q5BKY6 102 aa4.45□□□□□ -1.7
PTCD3-208ENST00000469585 CASC10Q5T4H9 136 aa4.45□□□□□ -1.7
PTCD3-208ENST00000469585 ZNF705AQ6ZN79 300 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-208ENST00000469585 GOLT1AQ6ZVE7 132 aa4.45□□□□□ -1.7
PTCD3-208ENST00000469585 CYB561D1Q8N8Q1 229 aa4.45□□□□□ -1.7
PTCD3-208ENST00000469585 TMEM263Q8WUH6 116 aaKnown RBP4.45□□□□□ -1.7
PTCD3-208ENST00000469585 HIST1H2BAQ96A08 127 aa4.45□□□□□ -1.7
PTCD3-208ENST00000469585 KCNS1Q96KK3 526 aa4.45□□□□□ -1.7
PTCD3-208ENST00000469585 FAM167A-AS1Q96KT0 104 aa4.45□□□□□ -1.7
PTCD3-208ENST00000469585 EDA2RQ9HAV5 297 aa4.45□□□□□ -1.7
PTCD3-208ENST00000469585 TREM1Q9NP99 234 aa4.45□□□□□ -1.7
PTCD3-208ENST00000469585 MANBALQ9NQG1 85 aa4.45□□□□□ -1.7
PTCD3-208ENST00000469585 ARL2-SNX15V9GYD0 113 aa4.45□□□□□ -1.7
PTCD3-208ENST00000469585 TRGV2A0A075B6R0 118 aa4.44□□□□□ -1.7
PTCD3-208ENST00000469585 DEFB131BA0A096LNP1 70 aa4.44□□□□□ -1.7
PTCD3-208ENST00000469585 TRAV21A0A0B4J279 112 aa4.44□□□□□ -1.7
PTCD3-208ENST00000469585 KRTAP16-1A8MUX0 517 aa4.44□□□□□ -1.7
PTCD3-208ENST00000469585 ZNF705GA8MUZ8 300 aaPredicted RBP4.44□□□□□ -1.7
PTCD3-208ENST00000469585 IGLL5B9A064 214 aa4.44□□□□□ -1.7
PTCD3-208ENST00000469585 K7EQD1 137 aa4.44□□□□□ -1.7
PTCD3-208ENST00000469585 AKR1C3P42330 323 aa4.44□□□□□ -1.7
PTCD3-208ENST00000469585 DEFB1P60022 68 aa4.44□□□□□ -1.7
PTCD3-208ENST00000469585 UBE2G2P60604 165 aa4.44□□□□□ -1.7
PTCD3-208ENST00000469585 ERCC8Q13216 396 aa4.44□□□□□ -1.7
PTCD3-208ENST00000469585 SMUG1Q53HV7 270 aa4.44□□□□□ -1.7
PTCD3-208ENST00000469585 CEMP1Q6PRD7 247 aaPredicted RBP4.44□□□□□ -1.7
PTCD3-208ENST00000469585 EIF4E3Q8N5X7 224 aaKnown RBP4.44□□□□□ -1.7
PTCD3-208ENST00000469585 Q8NAQ8 132 aa4.44□□□□□ -1.7
PTCD3-208ENST00000469585 FMC1Q96HJ9 113 aa4.44□□□□□ -1.7
PTCD3-208ENST00000469585 FAM210BQ96KR6 192 aa4.44□□□□□ -1.7
PTCD3-208ENST00000469585 TXNDC17Q9BRA2 123 aa4.44□□□□□ -1.7
PTCD3-208ENST00000469585 NDUFAF3Q9BU61 184 aa4.44□□□□□ -1.7
PTCD3-208ENST00000469585 ZNF492Q9P255 531 aa4.44□□□□□ -1.7
PTCD3-208ENST00000469585 NAGKQ9UJ70 344 aa4.44□□□□□ -1.7
PTCD3-208ENST00000469585 YTHDF2Q9Y5A9 579 aaKnown RBP4.44□□□□□ -1.7
PTCD3-208ENST00000469585 A8MTW9 85 aa4.43□□□□□ -1.7
PTCD3-208ENST00000469585 NXPH4O95158 308 aa4.43□□□□□ -1.7
PTCD3-208ENST00000469585 ATP5G1P05496 136 aa4.43□□□□□ -1.7
PTCD3-208ENST00000469585 DEFB130BP0DP73 79 aa4.43□□□□□ -1.7
PTCD3-208ENST00000469585 DEFB130AP0DP74 79 aa4.43□□□□□ -1.7
PTCD3-208ENST00000469585 S100A4P26447 101 aaKnown RBP4.43□□□□□ -1.7
PTCD3-208ENST00000469585 ATP5G3P48201 142 aa4.43□□□□□ -1.7
PTCD3-208ENST00000469585 FHITP49789 147 aa4.43□□□□□ -1.7
PTCD3-208ENST00000469585 FGF8P55075 233 aaPredicted RBP4.43□□□□□ -1.7
PTCD3-208ENST00000469585 FLI1Q01543 452 aaPredicted RBP4.43□□□□□ -1.7
PTCD3-208ENST00000469585 FAM222AQ5U5X8 452 aa4.43□□□□□ -1.7
PTCD3-208ENST00000469585 AMTNQ6UX39 209 aa4.43□□□□□ -1.7
PTCD3-208ENST00000469585 SSX7Q7RTT5 188 aa4.43□□□□□ -1.7
PTCD3-208ENST00000469585 PRNTQ86SH4 94 aa4.43□□□□□ -1.7
PTCD3-208ENST00000469585 UBE2DNLQ8IWF7 75 aa4.43□□□□□ -1.7
PTCD3-208ENST00000469585 TMEM75Q8N9X5 138 aa4.43□□□□□ -1.7
PTCD3-208ENST00000469585 CSNK1G2-AS1Q8NCQ2 148 aa4.43□□□□□ -1.7
PTCD3-208ENST00000469585 SUN5Q8TC36 379 aa4.43□□□□□ -1.7
PTCD3-208ENST00000469585 AGPAT4-IT1Q9H0P7 198 aa4.43□□□□□ -1.7
PTCD3-208ENST00000469585 BIN3Q9NQY0 253 aa4.43□□□□□ -1.7
PTCD3-208ENST00000469585 EPDR1Q9UM22 224 aa4.43□□□□□ -1.7
PTCD3-208ENST00000469585 IGHV1OR15-1A0A075B7D0 117 aa4.42□□□□□ -1.7
PTCD3-208ENST00000469585 A0A1B0GV50 99 aa4.42□□□□□ -1.7
PTCD3-208ENST00000469585 F5H768 121 aa4.42□□□□□ -1.7
PTCD3-208ENST00000469585 PEX7O00628 323 aa4.42□□□□□ -1.7
PTCD3-208ENST00000469585 PDE6DO43924 150 aa4.42□□□□□ -1.7
PTCD3-208ENST00000469585 TGP01266 2768 aa4.42□□□□□ -1.7
PTCD3-208ENST00000469585 TCRAP04437 139 aa4.42□□□□□ -1.7
PTCD3-208ENST00000469585 CRISP2P16562 243 aa4.42□□□□□ -1.7
PTCD3-208ENST00000469585 ZNF674Q2M3X9 581 aa4.42□□□□□ -1.7
PTCD3-208ENST00000469585 IBA57Q5T440 356 aaKnown RBP4.42□□□□□ -1.7
PTCD3-208ENST00000469585 Q6ZVQ6 151 aa4.42□□□□□ -1.7
PTCD3-208ENST00000469585 C15orf53Q8NAA6 179 aa4.42□□□□□ -1.7
PTCD3-208ENST00000469585 Q8TAT8 98 aa4.42□□□□□ -1.7
PTCD3-208ENST00000469585 PCNPQ8WW12 178 aaKnown RBP4.42□□□□□ -1.7
PTCD3-208ENST00000469585 VGLL1Q99990 258 aa4.42□□□□□ -1.7
PTCD3-208ENST00000469585 SPXQ9BT56 116 aa4.42□□□□□ -1.7
PTCD3-208ENST00000469585 NOP10Q9NPE3 64 aaKnown RBP4.42□□□□□ -1.7
PTCD3-208ENST00000469585 GNG13Q9P2W3 67 aa4.42□□□□□ -1.7
PTCD3-208ENST00000469585 ZFP30Q9Y2G7 519 aa4.42□□□□□ -1.7
PTCD3-208ENST00000469585 TRGV1A0A0A0MS02 117 aa4.41□□□□□ -1.7
PTCD3-208ENST00000469585 XKRY2A2RUG3 117 aa4.41□□□□□ -1.7
PTCD3-208ENST00000469585 KLLNB2CW77 178 aa4.41□□□□□ -1.7
PTCD3-208ENST00000469585 EPM2AB3EWF7 344 aa4.41□□□□□ -1.7
PTCD3-208ENST00000469585 LY6G6CO95867 125 aa4.41□□□□□ -1.7
PTCD3-208ENST00000469585 PFN1P07737 140 aaKnown RBP4.41□□□□□ -1.7
PTCD3-208ENST00000469585 GIG44P09565 113 aaPredicted RBP4.41□□□□□ -1.7
PTCD3-208ENST00000469585 RBMY1A1P0DJD3 496 aaKnown RBP4.41□□□□□ -1.7
PTCD3-208ENST00000469585 RBMY1CP0DJD4 496 aa4.41□□□□□ -1.7
PTCD3-208ENST00000469585 P0DMU3 169 aa4.41□□□□□ -1.7
PTCD3-208ENST00000469585 FAM231AP0DMU4 169 aa4.41□□□□□ -1.7
PTCD3-208ENST00000469585 FAM231CP0DMU5 169 aa4.41□□□□□ -1.7
PTCD3-208ENST00000469585 GNG5P63218 68 aa4.41□□□□□ -1.7
PTCD3-208ENST00000469585 SLAQ13239 276 aa4.41□□□□□ -1.7
PTCD3-208ENST00000469585 BTN1A1Q13410 526 aa4.41□□□□□ -1.7
PTCD3-208ENST00000469585 RBMY1FQ15415 496 aaKnown RBP4.41□□□□□ -1.7
PTCD3-208ENST00000469585 C1orf158Q8N1D5 194 aa4.41□□□□□ -1.7
PTCD3-208ENST00000469585 Q8NBF4 154 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms