RNA–Protein interactions for RNA: ENST00000468937.2

SYNE1-218, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 2

Gene SYNE1, Length 688 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-218ENST00000468937 OR1L4Q8NGR5 311 aa2.69□□□□□ -1.98
SYNE1-218ENST00000468937 SUN5Q8TC36 379 aa2.69□□□□□ -1.98
SYNE1-218ENST00000468937 FAM167A-AS1Q96KT0 104 aa2.69□□□□□ -1.98
SYNE1-218ENST00000468937 UBE2E2Q96LR5 201 aa2.69□□□□□ -1.98
SYNE1-218ENST00000468937 PFDN5Q99471 154 aa2.69□□□□□ -1.98
SYNE1-218ENST00000468937 RNF2Q99496 336 aa2.69□□□□□ -1.98
SYNE1-218ENST00000468937 MRPL32Q9BYC8 188 aaKnown RBP2.69□□□□□ -1.98
SYNE1-218ENST00000468937 ACTR3CQ9C0K3 210 aaPredicted RBP2.69□□□□□ -1.98
SYNE1-218ENST00000468937 MAP1LC3BQ9GZQ8 125 aa2.69□□□□□ -1.98
SYNE1-218ENST00000468937 DOK5Q9P104 306 aa2.69□□□□□ -1.98
SYNE1-218ENST00000468937 FUT9Q9Y231 359 aa2.69□□□□□ -1.98
SYNE1-218ENST00000468937 PUS1Q9Y606 427 aaKnown RBP eCLIP2.69□□□□□ -1.98
SYNE1-218ENST00000468937 KMT2AQ03164 3969 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 TRAV5A0A0B4J249 113 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 A0A1W2PPV4 95 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 RAB19A4D1S5 217 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 ZNF98A6NK75 572 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 COLCA2A8K830 154 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 NDUFA4O00483 81 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 MRPS12O15235 138 aaKnown RBP2.68□□□□□ -1.98
SYNE1-218ENST00000468937 COX7A2P2O60397 106 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 HYPMO75409 117 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 HBE1P02100 147 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 FABP1P07148 127 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 LGALS1P09382 135 aaKnown RBP2.68□□□□□ -1.98
SYNE1-218ENST00000468937 ARL14EPLP0DKL9 152 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 C8orf88P0DMB2 117 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 ORM2P19652 201 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 CRYBB3P26998 211 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 GCHFRP30047 84 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 C10orf113Q5VZT2 155 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 LCN15Q6UWW0 184 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 TOMM20LQ6UXN7 152 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 UNQ9165/PRO28630Q6UXU0 137 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 LINC00305Q7Z4B0 112 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 COMMD7Q86VX2 200 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 NDUFA11Q86Y39 141 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 GPHB5Q86YW7 130 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 OR4X2Q8NGF9 303 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 Q8WTZ3 238 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 SFT2D1Q8WV19 159 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 C4orf3Q8WVX3 66 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 FXYD5Q96DB9 178 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 FAM210AQ96ND0 272 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 SHANK2-AS3Q9BTD1 123 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 TPPP3Q9BW30 176 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 SLC25A2Q9BXI2 301 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 PEF1Q9UBV8 284 aaKnown RBP2.68□□□□□ -1.98
SYNE1-218ENST00000468937 HIGD1AQ9Y241 93 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 ALMS1Q8TCU4 4167 aa2.68□□□□□ -1.98
SYNE1-218ENST00000468937 HUWE1Q7Z6Z7 4374 aaKnown RBP2.67□□□□□ -1.98
SYNE1-218ENST00000468937 IGHV3OR16-8A0A075B7F1 116 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 A0A1B0GV50 99 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 TMEM213A2RRL7 107 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 RBFOX3A6NFN3 312 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 A8MWP6 167 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 C9JQL5 133 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 K7EMT4 169 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 LGALS9O00182 355 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 GGCTO75223 188 aaKnown RBP2.67□□□□□ -1.98
SYNE1-218ENST00000468937 NDUFS6O75380 124 aaKnown RBP2.67□□□□□ -1.98
SYNE1-218ENST00000468937 CXorf1O96002 111 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 OR10J4P0C629 311 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 IGLC2P0DOY2 106 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 PYYP10082 97 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 BCL2P10415 239 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 CD28P10747 220 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 MYCNOSP40205 109 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 PSMB3P49720 205 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 TAS2R45P59539 299 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 GUK1Q16774 197 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 DEFB136Q30KP8 78 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 KHDC3LQ587J8 217 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 Q5W150 140 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 OR5B12Q96R08 314 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 RARRES2Q99969 163 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 B9D2Q9BPU9 175 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 PBDC1Q9BVG4 233 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 OR51M1Q9H341 326 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 MANBALQ9NQG1 85 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 TMEM14CQ9P0S9 112 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 ZMAT5Q9UDW3 170 aaKnown RBP2.67□□□□□ -1.98
SYNE1-218ENST00000468937 RABAC1Q9UI14 185 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 ARL2-SNX15V9GYD0 113 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 SACSQ9NZJ4 4579 aa2.67□□□□□ -1.98
SYNE1-218ENST00000468937 EPPK1P58107 5090 aaKnown RBP2.66□□□□□ -1.98
SYNE1-218ENST00000468937 RYR2Q92736 4967 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 TRBV19A0A075B6N1 114 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 IGHV7-4-1A0A0J9YVY3 117 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 A0A1W2PRE2 83 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 RBMY1BA6NDE4 496 aaKnown RBP2.66□□□□□ -1.98
SYNE1-218ENST00000468937 RBMY1EA6NEQ0 496 aaKnown RBP2.66□□□□□ -1.98
SYNE1-218ENST00000468937 GGTLC3B5MD39 225 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 LINC01619G3V211 115 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 C3orf84H3BNL1 204 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 H3BQ15 152 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 ZNF207O43670 478 aaKnown RBP2.66□□□□□ -1.98
SYNE1-218ENST00000468937 OR7C2O60412 319 aa2.66□□□□□ -1.98
SYNE1-218ENST00000468937 SRP19P09132 144 aaKnown RBP2.66□□□□□ -1.98
SYNE1-218ENST00000468937 NBEAP1P0C6P0 100 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms