RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 A0A0J9YY99 117 aa13.95□□□□□ -0.18
NPHP4-206ENST00000468253 TMEM250H0YL14 139 aa13.95□□□□□ -0.18
NPHP4-206ENST00000468253 PAX4O43316 350 aa13.95□□□□□ -0.18
NPHP4-206ENST00000468253 IGHV3-53P01767 116 aa13.95□□□□□ -0.18
NPHP4-206ENST00000468253 CXCL1P09341 107 aa13.95□□□□□ -0.18
NPHP4-206ENST00000468253 CRYBA4P53673 196 aa13.95□□□□□ -0.18
NPHP4-206ENST00000468253 ZNF506Q5JVG8 444 aa13.95□□□□□ -0.18
NPHP4-206ENST00000468253 TRGV4A0A0C4DH28 118 aa13.94□□□□□ -0.18
NPHP4-206ENST00000468253 PGPEP1LA6NFU8 196 aa13.94□□□□□ -0.18
NPHP4-206ENST00000468253 C9JCJ5 164 aa13.94□□□□□ -0.18
NPHP4-206ENST00000468253 RS1O15537 224 aa13.94□□□□□ -0.18
NPHP4-206ENST00000468253 CCL18P55774 89 aa13.94□□□□□ -0.18
NPHP4-206ENST00000468253 CENPWQ5EE01 88 aa13.94□□□□□ -0.18
NPHP4-206ENST00000468253 SCRT2Q9NQ03 307 aa13.94□□□□□ -0.18
NPHP4-206ENST00000468253 BIN3Q9NQY0 253 aa13.94□□□□□ -0.18
NPHP4-206ENST00000468253 RAB19A4D1S5 217 aa13.93□□□□□ -0.18
NPHP4-206ENST00000468253 M0R036 132 aa13.93□□□□□ -0.18
NPHP4-206ENST00000468253 IGLV2-8P01709 118 aa13.93□□□□□ -0.18
NPHP4-206ENST00000468253 ARMS2P0C7Q2 107 aa13.93□□□□□ -0.18
NPHP4-206ENST00000468253 GNG4P50150 75 aa13.93□□□□□ -0.18
NPHP4-206ENST00000468253 SFTA3P0C7M3 94 aa13.92□□□□□ -0.18
NPHP4-206ENST00000468253 MED14OSP0DP75 135 aa13.92□□□□□ -0.18
NPHP4-206ENST00000468253 CFAP126Q5VTH2 177 aa13.92□□□□□ -0.18
NPHP4-206ENST00000468253 UBE2DNLQ8IWF7 75 aa13.92□□□□□ -0.18
NPHP4-206ENST00000468253 GRIFINA4D1Z8 144 aa13.91□□□□□ -0.18
NPHP4-206ENST00000468253 A8MWV9 139 aa13.91□□□□□ -0.18
NPHP4-206ENST00000468253 SYT8Q8NBV8 401 aa13.91□□□□□ -0.18
NPHP4-206ENST00000468253 A0A096LPF7 62 aa13.9□□□□□ -0.18
NPHP4-206ENST00000468253 MRPL23Q16540 153 aaKnown RBP13.9□□□□□ -0.18
NPHP4-206ENST00000468253 ZFP2Q6ZN57 461 aa13.9□□□□□ -0.18
NPHP4-206ENST00000468253 DAZAP1Q96EP5 407 aaKnown RBP13.9□□□□□ -0.18
NPHP4-206ENST00000468253 FAM210AQ96ND0 272 aa13.9□□□□□ -0.18
NPHP4-206ENST00000468253 PHLDA3Q9Y5J5 127 aa13.9□□□□□ -0.18
NPHP4-206ENST00000468253 ICOSQ9Y6W8 199 aa13.9□□□□□ -0.18
NPHP4-206ENST00000468253 TRBV20OR9-2A0A075B6H5 130 aa13.89□□□□□ -0.19
NPHP4-206ENST00000468253 H3BVH4 76 aa13.89□□□□□ -0.19
NPHP4-206ENST00000468253 GATA1P15976 413 aaPredicted RBP13.89□□□□□ -0.19
NPHP4-206ENST00000468253 DMRTA1Q5VZB9 504 aa13.89□□□□□ -0.19
NPHP4-206ENST00000468253 PRR27Q6MZM9 219 aa13.89□□□□□ -0.19
NPHP4-206ENST00000468253 SSBP4Q9BWG4 385 aaPredicted RBP13.89□□□□□ -0.19
NPHP4-206ENST00000468253 EIF5A2Q9GZV4 153 aaKnown RBP13.89□□□□□ -0.19
NPHP4-206ENST00000468253 TMSB15BA0A087X1C1 80 aa13.88□□□□□ -0.19
NPHP4-206ENST00000468253 C19orf71A6NCJ1 209 aa13.88□□□□□ -0.19
NPHP4-206ENST00000468253 MGST1P10620 155 aaKnown RBP13.88□□□□□ -0.19
NPHP4-206ENST00000468253 ESRGQ1W209 222 aa13.88□□□□□ -0.19
NPHP4-206ENST00000468253 LINC00588Q9Y4M8 146 aa13.88□□□□□ -0.19
NPHP4-206ENST00000468253 TRBV6-4A0A1B0GX49 114 aa13.87□□□□□ -0.19
NPHP4-206ENST00000468253 RPS20P60866 119 aaKnown RBP13.87□□□□□ -0.19
NPHP4-206ENST00000468253 OR5AL1P0C617 328 aa13.86□□□□□ -0.19
NPHP4-206ENST00000468253 TOR2AQ5JU69 321 aa13.86□□□□□ -0.19
NPHP4-206ENST00000468253 SH2D6Q7Z4S9 175 aa13.86□□□□□ -0.19
NPHP4-206ENST00000468253 ZFP82Q8N141 532 aa13.86□□□□□ -0.19
NPHP4-206ENST00000468253 OCC1Q8TAD7 63 aa13.86□□□□□ -0.19
NPHP4-206ENST00000468253 PARLQ9H300 379 aa13.86□□□□□ -0.19
NPHP4-206ENST00000468253 SNAI2O43623 268 aa13.85□□□□□ -0.19
NPHP4-206ENST00000468253 RPL19P84098 196 aaKnown RBP13.85□□□□□ -0.19
NPHP4-206ENST00000468253 ZNRF2Q8NHG8 242 aa13.85□□□□□ -0.19
NPHP4-206ENST00000468253 SFRP2Q96HF1 295 aa13.85□□□□□ -0.19
NPHP4-206ENST00000468253 UPK3BQ9BT76 320 aa13.85□□□□□ -0.19
NPHP4-206ENST00000468253 LY96Q9Y6Y9 160 aa13.85□□□□□ -0.19
NPHP4-206ENST00000468253 XKRY2A2RUG3 117 aa13.84□□□□□ -0.19
NPHP4-206ENST00000468253 K7EQD1 137 aa13.84□□□□□ -0.19
NPHP4-206ENST00000468253 GYPEP15421 78 aa13.84□□□□□ -0.19
NPHP4-206ENST00000468253 UFSP1Q6NVU6 142 aa13.84□□□□□ -0.19
NPHP4-206ENST00000468253 NEGR1Q7Z3B1 354 aa13.84□□□□□ -0.19
NPHP4-206ENST00000468253 SLC25A29Q8N8R3 303 aa13.84□□□□□ -0.19
NPHP4-206ENST00000468253 PCNPQ8WW12 178 aaKnown RBP13.84□□□□□ -0.19
NPHP4-206ENST00000468253 SMDT1Q9H4I9 107 aa13.84□□□□□ -0.19
NPHP4-206ENST00000468253 MRPS16Q9Y3D3 137 aaKnown RBP13.84□□□□□ -0.19
NPHP4-206ENST00000468253 RHODO00212 210 aa13.83□□□□□ -0.2
NPHP4-206ENST00000468253 NXPH4O95158 308 aa13.83□□□□□ -0.2
NPHP4-206ENST00000468253 P01737 135 aa13.83□□□□□ -0.2
NPHP4-206ENST00000468253 OR2D3Q8NGH3 330 aa13.83□□□□□ -0.2
NPHP4-206ENST00000468253 PRADC1Q9BSG0 188 aa13.83□□□□□ -0.2
NPHP4-206ENST00000468253 SRP19P09132 144 aaKnown RBP13.82□□□□□ -0.2
NPHP4-206ENST00000468253 SRIP30626 198 aa13.82□□□□□ -0.2
NPHP4-206ENST00000468253 RHOHQ15669 191 aa13.82□□□□□ -0.2
NPHP4-206ENST00000468253 LYPD5Q6UWN5 251 aa13.82□□□□□ -0.2
NPHP4-206ENST00000468253 Q6ZR54 194 aa13.82□□□□□ -0.2
NPHP4-206ENST00000468253 NUDT10Q8NFP7 164 aa13.82□□□□□ -0.2
NPHP4-206ENST00000468253 NUDT11Q96G61 164 aa13.82□□□□□ -0.2
NPHP4-206ENST00000468253 Q9H8V8 135 aa13.82□□□□□ -0.2
NPHP4-206ENST00000468253 DNAH10Q8IVF4 4471 aa13.82□□□□□ -0.2
NPHP4-206ENST00000468253 M0R381 172 aa13.81□□□□□ -0.2
NPHP4-206ENST00000468253 CRYGDP07320 174 aa13.81□□□□□ -0.2
NPHP4-206ENST00000468253 JPT2Q9H910 190 aa13.81□□□□□ -0.2
NPHP4-206ENST00000468253 NACAE9PAV3 2078 aa13.81□□□□□ -0.2
NPHP4-206ENST00000468253 IGHV3-73A0A0B4J1V6 119 aa13.8□□□□□ -0.2
NPHP4-206ENST00000468253 F2Z2F3 143 aa13.8□□□□□ -0.2
NPHP4-206ENST00000468253 K7EN84 100 aa13.8□□□□□ -0.2
NPHP4-206ENST00000468253 IGLC6P0CF74 106 aa13.8□□□□□ -0.2
NPHP4-206ENST00000468253 TIRAPP58753 221 aa13.8□□□□□ -0.2
NPHP4-206ENST00000468253 PEA15Q15121 130 aa13.8□□□□□ -0.2
NPHP4-206ENST00000468253 FAM74A3Q4VXF1 159 aa13.8□□□□□ -0.2
NPHP4-206ENST00000468253 SAMD10Q9BYL1 202 aa13.8□□□□□ -0.2
NPHP4-206ENST00000468253 A0A1W2PPQ1 181 aa13.79□□□□□ -0.2
NPHP4-206ENST00000468253 WDR73Q6P4I2 378 aa13.79□□□□□ -0.2
NPHP4-206ENST00000468253 Q6ZSN1 163 aa13.79□□□□□ -0.2
NPHP4-206ENST00000468253 OR10AG1Q8NH19 301 aa13.79□□□□□ -0.2
NPHP4-206ENST00000468253 SMIM7Q9BQ49 75 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms