RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 TMEM191AQ9H0A3 160 aa1.16□□□□□ -2.22
SMC4-208ENST00000467468 TRPM7Q96QT4 1865 aa1.16□□□□□ -2.22
SMC4-208ENST00000467468 HELZ2Q9BYK8 2649 aaKnown RBP1.15□□□□□ -2.23
SMC4-208ENST00000467468 LOC101927531A0A1B0GV80 90 aa1.15□□□□□ -2.23
SMC4-208ENST00000467468 A0A1W2PPM0 123 aa1.15□□□□□ -2.23
SMC4-208ENST00000467468 PYYP10082 97 aa1.15□□□□□ -2.23
SMC4-208ENST00000467468 SLC25A6P12236 298 aa1.15□□□□□ -2.23
SMC4-208ENST00000467468 CAV3P56539 151 aa1.15□□□□□ -2.23
SMC4-208ENST00000467468 FXYD3Q14802 87 aa1.15□□□□□ -2.23
SMC4-208ENST00000467468 Q6ZUT4 128 aa1.15□□□□□ -2.23
SMC4-208ENST00000467468 NDUFA11Q86Y39 141 aa1.15□□□□□ -2.23
SMC4-208ENST00000467468 VSTM2AQ8TAG5 236 aa1.15□□□□□ -2.23
SMC4-208ENST00000467468 ADGRB1O14514 1584 aa1.15□□□□□ -2.23
SMC4-208ENST00000467468 EML5Q05BV3 1969 aa1.14□□□□□ -2.23
SMC4-208ENST00000467468 EFCAB10A6NFE3 127 aa1.14□□□□□ -2.23
SMC4-208ENST00000467468 CCDC179H3BU77 68 aa1.14□□□□□ -2.23
SMC4-208ENST00000467468 PRB4P10163 310 aaPredicted RBP1.14□□□□□ -2.23
SMC4-208ENST00000467468 GUCA1AP43080 201 aaPredicted RBP1.14□□□□□ -2.23
SMC4-208ENST00000467468 C10orf99Q6UWK7 81 aa1.14□□□□□ -2.23
SMC4-208ENST00000467468 Q6ZS92 163 aa1.14□□□□□ -2.23
SMC4-208ENST00000467468 Q86TA4 180 aa1.14□□□□□ -2.23
SMC4-208ENST00000467468 C5orf56Q8N8D9 126 aa1.14□□□□□ -2.23
SMC4-208ENST00000467468 LINC00208Q96KT6 92 aa1.14□□□□□ -2.23
SMC4-208ENST00000467468 CASZ1Q86V15 1759 aa1.13□□□□□ -2.23
SMC4-208ENST00000467468 CDK12Q9NYV4 1490 aaPredicted RBP1.13□□□□□ -2.23
SMC4-208ENST00000467468 RRAS2P62070 204 aaPredicted RBP1.13□□□□□ -2.23
SMC4-208ENST00000467468 LINC01545Q5VT33 79 aa1.13□□□□□ -2.23
SMC4-208ENST00000467468 LINC00470Q9BZP3 86 aa1.13□□□□□ -2.23
SMC4-208ENST00000467468 GRIN2AQ12879 1464 aa1.12□□□□□ -2.23
SMC4-208ENST00000467468 TMEM2Q9UHN6 1383 aa1.12□□□□□ -2.23
SMC4-208ENST00000467468 SPCS2Q15005 226 aa1.12□□□□□ -2.23
SMC4-208ENST00000467468 C1orf54Q8WWF1 131 aa1.12□□□□□ -2.23
SMC4-208ENST00000467468 ARL11Q969Q4 196 aa1.12□□□□□ -2.23
SMC4-208ENST00000467468 PSMG3Q9BT73 122 aaPredicted RBP1.12□□□□□ -2.23
SMC4-208ENST00000467468 CCDC167Q9P0B6 97 aa1.12□□□□□ -2.23
SMC4-208ENST00000467468 CITO14578 2027 aa1.11□□□□□ -2.23
SMC4-208ENST00000467468 KMT2BQ9UMN6 2715 aaPredicted RBP1.11□□□□□ -2.23
SMC4-208ENST00000467468 TEX49A0A1B0GTD5 131 aa1.11□□□□□ -2.23
SMC4-208ENST00000467468 K7EIL1 84 aa1.11□□□□□ -2.23
SMC4-208ENST00000467468 APOC1P02654 83 aa1.11□□□□□ -2.23
SMC4-208ENST00000467468 TFF1P04155 84 aa1.11□□□□□ -2.23
SMC4-208ENST00000467468 EMX2Q04743 252 aa1.11□□□□□ -2.23
SMC4-208ENST00000467468 OR2T2Q6IF00 324 aa1.11□□□□□ -2.23
SMC4-208ENST00000467468 KCNRGQ8N5I3 272 aa1.11□□□□□ -2.23
SMC4-208ENST00000467468 DPH3Q96FX2 82 aa1.11□□□□□ -2.23
SMC4-208ENST00000467468 NDUFA12Q9UI09 145 aa1.11□□□□□ -2.23
SMC4-208ENST00000467468 PTPRMP28827 1452 aa1.11□□□□□ -2.23
SMC4-208ENST00000467468 LAMA4Q16363 1823 aa1.1□□□□□ -2.23
SMC4-208ENST00000467468 MYOM3Q5VTT5 1437 aa1.1□□□□□ -2.23
SMC4-208ENST00000467468 TRAV12-2A0A075B6T6 113 aa1.1□□□□□ -2.23
SMC4-208ENST00000467468 PIRTP0C851 137 aa1.1□□□□□ -2.23
SMC4-208ENST00000467468 SPANXN1Q5VSR9 72 aa1.1□□□□□ -2.23
SMC4-208ENST00000467468 PLXNA2O75051 1894 aa1.09□□□□□ -2.23
SMC4-208ENST00000467468 BLMP54132 1417 aaPredicted RBP1.09□□□□□ -2.23
SMC4-208ENST00000467468 GNG7O60262 68 aa1.09□□□□□ -2.23
SMC4-208ENST00000467468 PLAC4Q8WY50 150 aa1.09□□□□□ -2.23
SMC4-208ENST00000467468 IFI27L1Q96BM0 104 aa1.09□□□□□ -2.23
SMC4-208ENST00000467468 ZGRF1Q86YA3 2104 aa1.09□□□□□ -2.24
SMC4-208ENST00000467468 ROS1P08922 2347 aa1.09□□□□□ -2.24
SMC4-208ENST00000467468 IBTKQ9P2D0 1353 aaPredicted RBP1.08□□□□□ -2.24
SMC4-208ENST00000467468 SNRNP200O75643 2136 aaKnown RBP1.08□□□□□ -2.24
SMC4-208ENST00000467468 ZNF56Q15929 161 aa1.08□□□□□ -2.24
SMC4-208ENST00000467468 RPL13AP3Q6NVV1 102 aa1.08□□□□□ -2.24
SMC4-208ENST00000467468 TSKUQ8WUA8 353 aa1.08□□□□□ -2.24
SMC4-208ENST00000467468 MYH13Q9UKX3 1938 aa1.08□□□□□ -2.24
SMC4-208ENST00000467468 DLEC1Q9Y238 1755 aa1.08□□□□□ -2.24
SMC4-208ENST00000467468 NINQ8N4C6 2090 aa1.08□□□□□ -2.24
SMC4-208ENST00000467468 KLKP1Q107X0 134 aa1.07□□□□□ -2.24
SMC4-208ENST00000467468 TMEM141Q96I45 108 aa1.07□□□□□ -2.24
SMC4-208ENST00000467468 TMEM242Q9NWH2 141 aa1.07□□□□□ -2.24
SMC4-208ENST00000467468 CNTRLQ7Z7A1 2325 aa1.07□□□□□ -2.24
SMC4-208ENST00000467468 FAM25AB3EWG3 89 aa1.06□□□□□ -2.24
SMC4-208ENST00000467468 FAM25CB3EWG5 89 aa1.06□□□□□ -2.24
SMC4-208ENST00000467468 FAM25GB3EWG6 89 aa1.06□□□□□ -2.24
SMC4-208ENST00000467468 FXYD1O00168 92 aa1.06□□□□□ -2.24
SMC4-208ENST00000467468 IL5P05113 134 aa1.06□□□□□ -2.24
SMC4-208ENST00000467468 SLC48A1Q6P1K1 146 aa1.06□□□□□ -2.24
SMC4-208ENST00000467468 RREB1Q92766 1687 aa1.06□□□□□ -2.24
SMC4-208ENST00000467468 MYH6P13533 1939 aa1.05□□□□□ -2.24
SMC4-208ENST00000467468 ATG2AQ2TAZ0 1938 aa1.05□□□□□ -2.24
SMC4-208ENST00000467468 TCRBV3S1A0A5B6 114 aa1.05□□□□□ -2.24
SMC4-208ENST00000467468 FAM92AA1XBS5 289 aa1.05□□□□□ -2.24
SMC4-208ENST00000467468 NDUFB6O95139 128 aa1.05□□□□□ -2.24
SMC4-208ENST00000467468 PIPP12273 146 aaPredicted RBP1.05□□□□□ -2.24
SMC4-208ENST00000467468 NPC2P61916 151 aa1.05□□□□□ -2.24
SMC4-208ENST00000467468 SPINK13Q1W4C9 94 aa1.05□□□□□ -2.24
SMC4-208ENST00000467468 C9orf116Q5BN46 136 aaPredicted RBP1.05□□□□□ -2.24
SMC4-208ENST00000467468 PPP1R1CQ8WVI7 109 aa1.05□□□□□ -2.24
SMC4-208ENST00000467468 SPTSSAQ969W0 71 aa1.05□□□□□ -2.24
SMC4-208ENST00000467468 ZNF142P52746 1687 aaPredicted RBP1.04□□□□□ -2.24
SMC4-208ENST00000467468 TRAV12-3A0A0B4J271 114 aa1.04□□□□□ -2.24
SMC4-208ENST00000467468 SPINK9Q5DT21 86 aa1.04□□□□□ -2.24
SMC4-208ENST00000467468 CYP2G1PQ6ZSU1 146 aa1.04□□□□□ -2.24
SMC4-208ENST00000467468 SNRNP25Q9BV90 132 aaKnown RBP1.04□□□□□ -2.24
SMC4-208ENST00000467468 TMEM14BQ9NUH8 114 aa1.04□□□□□ -2.24
SMC4-208ENST00000467468 COA4Q9NYJ1 87 aa1.04□□□□□ -2.24
SMC4-208ENST00000467468 BET1LQ9NYM9 111 aa1.04□□□□□ -2.24
SMC4-208ENST00000467468 APODP05090 189 aa1.03□□□□□ -2.24
SMC4-208ENST00000467468 ELOF1P60002 83 aaKnown RBP1.03□□□□□ -2.24
SMC4-208ENST00000467468 COPS9Q8WXC6 57 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms