RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 WIPF3A6NGB9 483 aa6.79□□□□□ -1.32
HPS4-209ENST00000466781 CRYBA4P53673 196 aa6.79□□□□□ -1.32
HPS4-209ENST00000466781 DOPEY2Q9Y3R5 2298 aa6.79□□□□□ -1.32
HPS4-209ENST00000466781 DNAH12Q6ZR08 3092 aa6.79□□□□□ -1.32
HPS4-209ENST00000466781 K7EP34 96 aa6.79□□□□□ -1.32
HPS4-209ENST00000466781 AJUBAQ96IF1 538 aa6.79□□□□□ -1.32
HPS4-209ENST00000466781 CTSZQ9UBR2 303 aa6.79□□□□□ -1.32
HPS4-209ENST00000466781 C10orf105Q8TEF2 133 aa6.79□□□□□ -1.32
HPS4-209ENST00000466781 IGLC2P0DOY2 106 aa6.79□□□□□ -1.32
HPS4-209ENST00000466781 IGLC3P0DOY3 106 aa6.79□□□□□ -1.32
HPS4-209ENST00000466781 C11orf52Q96A22 123 aa6.79□□□□□ -1.32
HPS4-209ENST00000466781 RS1O15537 224 aa6.78□□□□□ -1.32
HPS4-209ENST00000466781 ZNF726P1Q15940 193 aa6.78□□□□□ -1.32
HPS4-209ENST00000466781 Q8NA96 180 aa6.78□□□□□ -1.32
HPS4-209ENST00000466781 AGPAT4-IT1Q9H0P7 198 aa6.78□□□□□ -1.32
HPS4-209ENST00000466781 C9JQL5 133 aa6.78□□□□□ -1.32
HPS4-209ENST00000466781 K7ERJ3 54 aa6.78□□□□□ -1.32
HPS4-209ENST00000466781 PYY3Q5JQD4 70 aa6.78□□□□□ -1.32
HPS4-209ENST00000466781 TMEM131Q92545 1883 aa6.78□□□□□ -1.32
HPS4-209ENST00000466781 ESPL1Q14674 2120 aa6.78□□□□□ -1.32
HPS4-209ENST00000466781 DEFB135Q30KP9 77 aa6.78□□□□□ -1.32
HPS4-209ENST00000466781 C14orf177Q52M58 125 aa6.78□□□□□ -1.32
HPS4-209ENST00000466781 C14orf132Q9NPU4 83 aa6.78□□□□□ -1.32
HPS4-209ENST00000466781 A0A1W2PPM0 123 aa6.78□□□□□ -1.32
HPS4-209ENST00000466781 ASPHD1Q5U4P2 390 aa6.78□□□□□ -1.32
HPS4-209ENST00000466781 SEM1Q6ZVN7 128 aa6.78□□□□□ -1.32
HPS4-209ENST00000466781 DKK2Q9UBU2 259 aa6.78□□□□□ -1.32
HPS4-209ENST00000466781 A0A1B0GX51 115 aa6.77□□□□□ -1.33
HPS4-209ENST00000466781 ZFP2Q6ZN57 461 aa6.77□□□□□ -1.33
HPS4-209ENST00000466781 SND1-IT1Q9HBX3 110 aa6.77□□□□□ -1.33
HPS4-209ENST00000466781 IGLC7A0M8Q6 106 aa6.77□□□□□ -1.33
HPS4-209ENST00000466781 SIVA1O15304 175 aa6.77□□□□□ -1.33
HPS4-209ENST00000466781 CFC1BP0CG36 223 aa6.77□□□□□ -1.33
HPS4-209ENST00000466781 CFC1P0CG37 223 aa6.77□□□□□ -1.33
HPS4-209ENST00000466781 GPHB5Q86YW7 130 aa6.77□□□□□ -1.33
HPS4-209ENST00000466781 BAALCQ8WXS3 180 aa6.77□□□□□ -1.33
HPS4-209ENST00000466781 RNF183Q96D59 192 aa6.77□□□□□ -1.33
HPS4-209ENST00000466781 MKI67P46013 3256 aaKnown RBP6.77□□□□□ -1.33
HPS4-209ENST00000466781 NREPQ16612 68 aa6.77□□□□□ -1.33
HPS4-209ENST00000466781 OPRPNQ99935 248 aaPredicted RBP6.77□□□□□ -1.33
HPS4-209ENST00000466781 C20orf144Q9BQM9 153 aa6.77□□□□□ -1.33
HPS4-209ENST00000466781 LAMA2P24043 3122 aaKnown RBP6.77□□□□□ -1.33
HPS4-209ENST00000466781 C16orf54Q6UWD8 224 aa6.77□□□□□ -1.33
HPS4-209ENST00000466781 IGHV7-81A0A0B4J1V7 117 aa6.76□□□□□ -1.33
HPS4-209ENST00000466781 DEFB4AO15263 64 aa6.76□□□□□ -1.33
HPS4-209ENST00000466781 LINC01545Q5VT33 79 aa6.76□□□□□ -1.33
HPS4-209ENST00000466781 LRRC75A-AS1Q8N1F1 130 aa6.76□□□□□ -1.33
HPS4-209ENST00000466781 C5orf56Q8N8D9 126 aa6.76□□□□□ -1.33
HPS4-209ENST00000466781 KIF26BQ2KJY2 2108 aa6.76□□□□□ -1.33
HPS4-209ENST00000466781 ADCYAP1P18509 176 aa6.76□□□□□ -1.33
HPS4-209ENST00000466781 C2orf70A6NJV1 201 aa6.76□□□□□ -1.33
HPS4-209ENST00000466781 H0YGX0 51 aa6.76□□□□□ -1.33
HPS4-209ENST00000466781 PRB2P02812 416 aaPredicted RBP6.76□□□□□ -1.33
HPS4-209ENST00000466781 CXCL5P42830 114 aa6.76□□□□□ -1.33
HPS4-209ENST00000466781 POU2AF1Q16633 256 aa6.76□□□□□ -1.33
HPS4-209ENST00000466781 C12orf74Q32Q52 190 aa6.76□□□□□ -1.33
HPS4-209ENST00000466781 RPL39LQ96EH5 51 aaKnown RBP6.76□□□□□ -1.33
HPS4-209ENST00000466781 FREM3P0C091 2139 aa6.76□□□□□ -1.33
HPS4-209ENST00000466781 BLCAPP62952 87 aa6.76□□□□□ -1.33
HPS4-209ENST00000466781 IL15RAQ13261 267 aa6.76□□□□□ -1.33
HPS4-209ENST00000466781 LRRK1Q38SD2 2015 aa6.76□□□□□ -1.33
HPS4-209ENST00000466781 SPRY2O43597 315 aa6.75□□□□□ -1.33
HPS4-209ENST00000466781 NTN5Q8WTR8 489 aaPredicted RBP6.75□□□□□ -1.33
HPS4-209ENST00000466781 ABCA4P78363 2273 aa6.75□□□□□ -1.33
HPS4-209ENST00000466781 ALPK3Q96L96 1907 aa6.75□□□□□ -1.33
HPS4-209ENST00000466781 PROP1O75360 226 aa6.75□□□□□ -1.33
HPS4-209ENST00000466781 SEC16AO15027 2179 aa6.75□□□□□ -1.33
HPS4-209ENST00000466781 H0Y9J4 135 aa6.75□□□□□ -1.33
HPS4-209ENST00000466781 CEP192Q8TEP8 1941 aa6.75□□□□□ -1.33
HPS4-209ENST00000466781 KMT2EQ8IZD2 1858 aa6.75□□□□□ -1.33
HPS4-209ENST00000466781 PTPRSQ13332 1948 aa6.75□□□□□ -1.33
HPS4-209ENST00000466781 INSL3P51460 131 aa6.75□□□□□ -1.33
HPS4-209ENST00000466781 DIRC1Q969H9 104 aa6.75□□□□□ -1.33
HPS4-209ENST00000466781 CITED1Q99966 193 aa6.75□□□□□ -1.33
HPS4-209ENST00000466781 DOCK9Q9BZ29 2069 aa6.75□□□□□ -1.33
HPS4-209ENST00000466781 WISP2O76076 250 aa6.75□□□□□ -1.33
HPS4-209ENST00000466781 ACYP1P07311 99 aa6.75□□□□□ -1.33
HPS4-209ENST00000466781 CEP290O15078 2479 aa6.75□□□□□ -1.33
HPS4-209ENST00000466781 CEP350Q5VT06 3117 aa6.75□□□□□ -1.33
HPS4-209ENST00000466781 TRBV7-3A0A075B6L6 115 aa6.74□□□□□ -1.33
HPS4-209ENST00000466781 PRR20EP86478 221 aa6.74□□□□□ -1.33
HPS4-209ENST00000466781 PRR20CP86479 221 aa6.74□□□□□ -1.33
HPS4-209ENST00000466781 PRR20DP86480 221 aa6.74□□□□□ -1.33
HPS4-209ENST00000466781 PRR20BP86481 221 aa6.74□□□□□ -1.33
HPS4-209ENST00000466781 PRR20AP86496 221 aa6.74□□□□□ -1.33
HPS4-209ENST00000466781 SPAG11BQ08648 103 aa6.74□□□□□ -1.33
HPS4-209ENST00000466781 H3BMG7 143 aa6.74□□□□□ -1.33
HPS4-209ENST00000466781 ZFP36P26651 326 aaKnown RBP6.74□□□□□ -1.33
HPS4-209ENST00000466781 RSPO1Q2MKA7 263 aaPredicted RBP6.74□□□□□ -1.33
HPS4-209ENST00000466781 C11orf45Q8TAV5 145 aa6.74□□□□□ -1.33
HPS4-209ENST00000466781 TP53BP1Q12888 1972 aaPredicted RBP6.74□□□□□ -1.33
HPS4-209ENST00000466781 IGLL1P15814 213 aa6.74□□□□□ -1.33
HPS4-209ENST00000466781 ETDBQ3ZM63 59 aa6.74□□□□□ -1.33
HPS4-209ENST00000466781 SPANXCQ9NY87 97 aa6.74□□□□□ -1.33
HPS4-209ENST00000466781 PLA2G2AP14555 144 aa6.74□□□□□ -1.33
HPS4-209ENST00000466781 KLK12Q9UKR0 248 aa6.74□□□□□ -1.33
HPS4-209ENST00000466781 GAGE12HA6NDE8 117 aa6.73□□□□□ -1.33
HPS4-209ENST00000466781 IGLV11-55A0A075B6I3 123 aa6.73□□□□□ -1.33
HPS4-209ENST00000466781 MYO7BQ6PIF6 2116 aa6.73□□□□□ -1.33
HPS4-209ENST00000466781 GTSF1Q8WW33 167 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms