RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 RNF151Q2KHN1 245 aa4.95□□□□□ -1.62
CLDN4-204ENST00000466411 CENPWQ5EE01 88 aa4.95□□□□□ -1.62
CLDN4-204ENST00000466411 CLLU1Q5K131 121 aa4.95□□□□□ -1.62
CLDN4-204ENST00000466411 DNLZQ5SXM8 178 aa4.95□□□□□ -1.62
CLDN4-204ENST00000466411 Q8N1X5 172 aa4.95□□□□□ -1.62
CLDN4-204ENST00000466411 SYT8Q8NBV8 401 aa4.95□□□□□ -1.62
CLDN4-204ENST00000466411 PTH2Q96A98 100 aa4.95□□□□□ -1.62
CLDN4-204ENST00000466411 MLST8Q9BVC4 326 aa4.95□□□□□ -1.62
CLDN4-204ENST00000466411 MYCBP2O75592 4640 aa4.95□□□□□ -1.62
CLDN4-204ENST00000466411 TRAV34A0A0B4J273 112 aa4.94□□□□□ -1.62
CLDN4-204ENST00000466411 ZNF705GA8MUZ8 300 aaPredicted RBP4.94□□□□□ -1.62
CLDN4-204ENST00000466411 B4DEV8 164 aa4.94□□□□□ -1.62
CLDN4-204ENST00000466411 M0R2P5 195 aa4.94□□□□□ -1.62
CLDN4-204ENST00000466411 ORM1P02763 201 aa4.94□□□□□ -1.62
CLDN4-204ENST00000466411 RBMY1A1P0DJD3 496 aaKnown RBP4.94□□□□□ -1.62
CLDN4-204ENST00000466411 RBMY1CP0DJD4 496 aa4.94□□□□□ -1.62
CLDN4-204ENST00000466411 RBMY1FQ15415 496 aaKnown RBP4.94□□□□□ -1.62
CLDN4-204ENST00000466411 PRR9Q5T870 116 aa4.94□□□□□ -1.62
CLDN4-204ENST00000466411 FAM222AQ5U5X8 452 aa4.94□□□□□ -1.62
CLDN4-204ENST00000466411 UQCC3Q6UW78 93 aa4.94□□□□□ -1.62
CLDN4-204ENST00000466411 LINC00336Q6ZUF6 198 aa4.94□□□□□ -1.62
CLDN4-204ENST00000466411 MAPKAPK5-AS1Q8N8E1 139 aa4.94□□□□□ -1.62
CLDN4-204ENST00000466411 ZC2HC1AQ96GY0 325 aa4.94□□□□□ -1.62
CLDN4-204ENST00000466411 LINC00479Q96M42 142 aa4.94□□□□□ -1.62
CLDN4-204ENST00000466411 SMIM7Q9BQ49 75 aa4.94□□□□□ -1.62
CLDN4-204ENST00000466411 IL36BQ9NZH7 164 aa4.94□□□□□ -1.62
CLDN4-204ENST00000466411 NAGKQ9UJ70 344 aa4.94□□□□□ -1.62
CLDN4-204ENST00000466411 TRGV2A0A075B6R0 118 aa4.93□□□□□ -1.62
CLDN4-204ENST00000466411 A0A1W2PPQ1 181 aa4.93□□□□□ -1.62
CLDN4-204ENST00000466411 H3BNG1 76 aa4.93□□□□□ -1.62
CLDN4-204ENST00000466411 SPINK4O60575 86 aa4.93□□□□□ -1.62
CLDN4-204ENST00000466411 SH2D1AO60880 128 aa4.93□□□□□ -1.62
CLDN4-204ENST00000466411 CDK2AP2O75956 126 aa4.93□□□□□ -1.62
CLDN4-204ENST00000466411 P01737 135 aa4.93□□□□□ -1.62
CLDN4-204ENST00000466411 MGST1P10620 155 aaKnown RBP4.93□□□□□ -1.62
CLDN4-204ENST00000466411 EMP1P54849 157 aa4.93□□□□□ -1.62
CLDN4-204ENST00000466411 OR5I1Q13606 314 aa4.93□□□□□ -1.62
CLDN4-204ENST00000466411 MUC21Q5SSG8 566 aa4.93□□□□□ -1.62
CLDN4-204ENST00000466411 ZNF575Q86XF7 245 aa4.93□□□□□ -1.62
CLDN4-204ENST00000466411 LINC00612Q8N6U2 182 aa4.93□□□□□ -1.62
CLDN4-204ENST00000466411 C15orf53Q8NAA6 179 aa4.93□□□□□ -1.62
CLDN4-204ENST00000466411 C11orf72Q8NBR9 251 aa4.93□□□□□ -1.62
CLDN4-204ENST00000466411 RASL10AQ92737 203 aa4.93□□□□□ -1.62
CLDN4-204ENST00000466411 TVP23CQ96ET8 276 aa4.93□□□□□ -1.62
CLDN4-204ENST00000466411 SGK494Q96LW2 274 aa4.93□□□□□ -1.62
CLDN4-204ENST00000466411 C8orf49Q96NF6 230 aa4.93□□□□□ -1.62
CLDN4-204ENST00000466411 PARLQ9H300 379 aa4.93□□□□□ -1.62
CLDN4-204ENST00000466411 NOP10Q9NPE3 64 aaKnown RBP4.93□□□□□ -1.62
CLDN4-204ENST00000466411 DEFB131BA0A096LNP1 70 aa4.92□□□□□ -1.62
CLDN4-204ENST00000466411 IGHV3-16A0A0C4DH30 117 aa4.92□□□□□ -1.62
CLDN4-204ENST00000466411 PLAC8L1A1L4L8 177 aa4.92□□□□□ -1.62
CLDN4-204ENST00000466411 FAM231BA6NCW3 169 aa4.92□□□□□ -1.62
CLDN4-204ENST00000466411 ZNF727A8MUV8 499 aa4.92□□□□□ -1.62
CLDN4-204ENST00000466411 A8MWV9 139 aa4.92□□□□□ -1.62
CLDN4-204ENST00000466411 KRBOX1C9JBD0 128 aa4.92□□□□□ -1.62
CLDN4-204ENST00000466411 F2Z2F3 143 aa4.92□□□□□ -1.62
CLDN4-204ENST00000466411 RHODO00212 210 aa4.92□□□□□ -1.62
CLDN4-204ENST00000466411 TYMSP04818 313 aa4.92□□□□□ -1.62
CLDN4-204ENST00000466411 OR5AL1P0C617 328 aa4.92□□□□□ -1.62
CLDN4-204ENST00000466411 AZU1P20160 251 aa4.92□□□□□ -1.62
CLDN4-204ENST00000466411 PNRC1Q12796 327 aaPredicted RBP4.92□□□□□ -1.62
CLDN4-204ENST00000466411 SOHLH1Q5JUK2 328 aa4.92□□□□□ -1.62
CLDN4-204ENST00000466411 PRR27Q6MZM9 219 aa4.92□□□□□ -1.62
CLDN4-204ENST00000466411 CEMP1Q6PRD7 247 aaPredicted RBP4.92□□□□□ -1.62
CLDN4-204ENST00000466411 FAM231DQ6ZW35 169 aa4.92□□□□□ -1.62
CLDN4-204ENST00000466411 ZFP82Q8N141 532 aa4.92□□□□□ -1.62
CLDN4-204ENST00000466411 C15orf54Q8N8G6 183 aa4.92□□□□□ -1.62
CLDN4-204ENST00000466411 PHLDA1Q8WV24 401 aaPredicted RBP4.92□□□□□ -1.62
CLDN4-204ENST00000466411 DERL1Q9BUN8 251 aa4.92□□□□□ -1.62
CLDN4-204ENST00000466411 PHLDA3Q9Y5J5 127 aa4.92□□□□□ -1.62
CLDN4-204ENST00000466411 HMCN2Q8NDA2 5059 aa4.91□□□□□ -1.62
CLDN4-204ENST00000466411 FLG2Q5D862 2391 aaPredicted RBP4.91□□□□□ -1.62
CLDN4-204ENST00000466411 TRGV1A0A0A0MS02 117 aa4.91□□□□□ -1.62
CLDN4-204ENST00000466411 TRAV4A0A0B4J268 109 aa4.91□□□□□ -1.62
CLDN4-204ENST00000466411 A8MWL6 223 aa4.91□□□□□ -1.62
CLDN4-204ENST00000466411 DEFB4AO15263 64 aa4.91□□□□□ -1.62
CLDN4-204ENST00000466411 SRP19P09132 144 aaKnown RBP4.91□□□□□ -1.62
CLDN4-204ENST00000466411 DEFB130BP0DP73 79 aa4.91□□□□□ -1.62
CLDN4-204ENST00000466411 DEFB130AP0DP74 79 aa4.91□□□□□ -1.62
CLDN4-204ENST00000466411 ZNF80P51504 273 aaPredicted RBP4.91□□□□□ -1.62
CLDN4-204ENST00000466411 CEBPGP53567 150 aa4.91□□□□□ -1.62
CLDN4-204ENST00000466411 NANOS2P60321 138 aaKnown RBP4.91□□□□□ -1.62
CLDN4-204ENST00000466411 TMEM241Q24JQ0 296 aa4.91□□□□□ -1.62
CLDN4-204ENST00000466411 ZNF876PQ49A33 203 aa4.91□□□□□ -1.62
CLDN4-204ENST00000466411 GAGE13Q4V321 117 aa4.91□□□□□ -1.62
CLDN4-204ENST00000466411 ZFP2Q6ZN57 461 aa4.91□□□□□ -1.62
CLDN4-204ENST00000466411 Q6ZTC4 211 aa4.91□□□□□ -1.62
CLDN4-204ENST00000466411 SH2D6Q7Z4S9 175 aa4.91□□□□□ -1.62
CLDN4-204ENST00000466411 BORCS7Q96B45 105 aa4.91□□□□□ -1.62
CLDN4-204ENST00000466411 C9orf85Q96MD7 179 aa4.91□□□□□ -1.62
CLDN4-204ENST00000466411 GSN-AS1Q9NRJ2 163 aa4.91□□□□□ -1.62
CLDN4-204ENST00000466411 NAT8Q9UHE5 227 aa4.91□□□□□ -1.62
CLDN4-204ENST00000466411 TRBV20OR9-2A0A075B6H5 130 aa4.9□□□□□ -1.63
CLDN4-204ENST00000466411 C19orf71A6NCJ1 209 aa4.9□□□□□ -1.63
CLDN4-204ENST00000466411 PPP1R2P9O14990 202 aa4.9□□□□□ -1.63
CLDN4-204ENST00000466411 RTL8CO15255 209 aa4.9□□□□□ -1.63
CLDN4-204ENST00000466411 GYPEP15421 78 aa4.9□□□□□ -1.63
CLDN4-204ENST00000466411 ERVFC1-1P60608 527 aa4.9□□□□□ -1.63
CLDN4-204ENST00000466411 CACNG7P62955 275 aa4.9□□□□□ -1.63
CLDN4-204ENST00000466411 C12orf74Q32Q52 190 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms