RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 RNF222A6NCQ9 220 aa13.67□□□□□ -0.22
COL6A1-203ENST00000466285 LECT2O14960 151 aa13.67□□□□□ -0.22
COL6A1-203ENST00000466285 LINC00694P0DN24 101 aa13.67□□□□□ -0.22
COL6A1-203ENST00000466285 RHOHQ15669 191 aa13.67□□□□□ -0.22
COL6A1-203ENST00000466285 HSD17B11Q8NBQ5 300 aa13.67□□□□□ -0.22
COL6A1-203ENST00000466285 SH3BGRL3Q9H299 93 aa13.67□□□□□ -0.22
COL6A1-203ENST00000466285 PSG8Q9UQ74 426 aa13.67□□□□□ -0.22
COL6A1-203ENST00000466285 TRBV6-4A0A1B0GX49 114 aa13.66□□□□□ -0.22
COL6A1-203ENST00000466285 SMLR1H3BR10 107 aa13.66□□□□□ -0.22
COL6A1-203ENST00000466285 GCHFRP30047 84 aa13.66□□□□□ -0.22
COL6A1-203ENST00000466285 LELP1Q5T871 98 aa13.66□□□□□ -0.22
COL6A1-203ENST00000466285 SH2D6Q7Z4S9 175 aa13.66□□□□□ -0.22
COL6A1-203ENST00000466285 ARL6IP6Q8N6S5 226 aa13.66□□□□□ -0.22
COL6A1-203ENST00000466285 C5orf17Q8NAS9 161 aa13.66□□□□□ -0.22
COL6A1-203ENST00000466285 OR11H4Q8NGC9 324 aa13.66□□□□□ -0.22
COL6A1-203ENST00000466285 NTN5Q8WTR8 489 aaPredicted RBP13.66□□□□□ -0.22
COL6A1-203ENST00000466285 RAB24Q969Q5 203 aa13.66□□□□□ -0.22
COL6A1-203ENST00000466285 DNAJC30Q96LL9 226 aa13.66□□□□□ -0.22
COL6A1-203ENST00000466285 JPT2Q9H910 190 aa13.66□□□□□ -0.22
COL6A1-203ENST00000466285 TRAV8-6A0A0B4J262 113 aa13.65□□□□□ -0.22
COL6A1-203ENST00000466285 PRNTQ86SH4 94 aa13.65□□□□□ -0.22
COL6A1-203ENST00000466285 SUN5Q8TC36 379 aa13.65□□□□□ -0.22
COL6A1-203ENST00000466285 LINC00479Q96M42 142 aa13.65□□□□□ -0.22
COL6A1-203ENST00000466285 LRP1Q07954 4544 aaKnown RBP13.65□□□□□ -0.22
COL6A1-203ENST00000466285 IGKV3D-20A0A0C4DH25 116 aa13.64□□□□□ -0.23
COL6A1-203ENST00000466285 HMSDA8MTL9 139 aa13.64□□□□□ -0.23
COL6A1-203ENST00000466285 PFN1P07737 140 aaKnown RBP13.64□□□□□ -0.23
COL6A1-203ENST00000466285 LINC01620Q4KN68 170 aa13.64□□□□□ -0.23
COL6A1-203ENST00000466285 OR2G3Q8NGZ4 309 aa13.64□□□□□ -0.23
COL6A1-203ENST00000466285 PRADC1Q9BSG0 188 aa13.64□□□□□ -0.23
COL6A1-203ENST00000466285 PARLQ9H300 379 aa13.64□□□□□ -0.23
COL6A1-203ENST00000466285 FXYD6-FXYD2A0A087WZ82 144 aa13.63□□□□□ -0.23
COL6A1-203ENST00000466285 TRAV34A0A0B4J273 112 aa13.63□□□□□ -0.23
COL6A1-203ENST00000466285 GAGE12JA6NER3 117 aa13.63□□□□□ -0.23
COL6A1-203ENST00000466285 ATP6V0CP27449 155 aa13.63□□□□□ -0.23
COL6A1-203ENST00000466285 FLI1Q01543 452 aaPredicted RBP13.63□□□□□ -0.23
COL6A1-203ENST00000466285 GAGE1Q13065 139 aa13.63□□□□□ -0.23
COL6A1-203ENST00000466285 GAGE4Q13068 117 aa13.63□□□□□ -0.23
COL6A1-203ENST00000466285 GAGE5Q13069 117 aa13.63□□□□□ -0.23
COL6A1-203ENST00000466285 GAGE13Q4V321 117 aa13.63□□□□□ -0.23
COL6A1-203ENST00000466285 AKAP14Q86UN6 197 aa13.63□□□□□ -0.23
COL6A1-203ENST00000466285 ATP6V0E2Q8NHE4 81 aa13.63□□□□□ -0.23
COL6A1-203ENST00000466285 NDFIP1Q9BT67 221 aa13.63□□□□□ -0.23
COL6A1-203ENST00000466285 SAMD10Q9BYL1 202 aa13.63□□□□□ -0.23
COL6A1-203ENST00000466285 GTSF1LQ9H1H1 148 aa13.63□□□□□ -0.23
COL6A1-203ENST00000466285 SUMO1P63165 101 aaKnown RBP13.62□□□□□ -0.23
COL6A1-203ENST00000466285 DAZ4Q86SG3 579 aaKnown RBP13.62□□□□□ -0.23
COL6A1-203ENST00000466285 C14orf178Q8N769 122 aaPredicted RBP13.62□□□□□ -0.23
COL6A1-203ENST00000466285 DAZ3Q9NR90 486 aaKnown RBP13.62□□□□□ -0.23
COL6A1-203ENST00000466285 FAM229AH3BQW9 127 aa13.61□□□□□ -0.23
COL6A1-203ENST00000466285 TAAR5O14804 337 aa13.61□□□□□ -0.23
COL6A1-203ENST00000466285 ZNF345Q14585 488 aa13.61□□□□□ -0.23
COL6A1-203ENST00000466285 UFSP1Q6NVU6 142 aa13.61□□□□□ -0.23
COL6A1-203ENST00000466285 Q6ZSA8 131 aa13.61□□□□□ -0.23
COL6A1-203ENST00000466285 EPDR1Q9UM22 224 aa13.61□□□□□ -0.23
COL6A1-203ENST00000466285 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.6□□□□□ -0.23
COL6A1-203ENST00000466285 C1QBP02746 253 aa13.6□□□□□ -0.23
COL6A1-203ENST00000466285 ZNF726P1Q15940 193 aa13.6□□□□□ -0.23
COL6A1-203ENST00000466285 SMUG1Q53HV7 270 aa13.6□□□□□ -0.23
COL6A1-203ENST00000466285 CYB561D1Q8N8Q1 229 aa13.6□□□□□ -0.23
COL6A1-203ENST00000466285 FAT3Q8TDW7 4589 aa13.6□□□□□ -0.23
COL6A1-203ENST00000466285 SERTM2A0A1B0GWG4 89 aa13.59□□□□□ -0.23
COL6A1-203ENST00000466285 MGST1P10620 155 aaKnown RBP13.59□□□□□ -0.23
COL6A1-203ENST00000466285 LAGE3Q14657 143 aa13.59□□□□□ -0.23
COL6A1-203ENST00000466285 INO80EQ8NBZ0 244 aaPredicted RBP13.59□□□□□ -0.23
COL6A1-203ENST00000466285 PTH2Q96A98 100 aa13.59□□□□□ -0.23
COL6A1-203ENST00000466285 ARL2-SNX15V9GYD0 113 aa13.59□□□□□ -0.23
COL6A1-203ENST00000466285 PKHD1L1Q86WI1 4243 aa13.59□□□□□ -0.23
COL6A1-203ENST00000466285 ARPC5O15511 151 aa13.58□□□□□ -0.24
COL6A1-203ENST00000466285 KCNRGQ8N5I3 272 aa13.58□□□□□ -0.24
COL6A1-203ENST00000466285 PSMG3Q9BT73 122 aaPredicted RBP13.58□□□□□ -0.24
COL6A1-203ENST00000466285 H3BVH4 76 aa13.57□□□□□ -0.24
COL6A1-203ENST00000466285 Q86TA4 180 aa13.57□□□□□ -0.24
COL6A1-203ENST00000466285 LINC00528Q8N1L1 170 aa13.57□□□□□ -0.24
COL6A1-203ENST00000466285 HMCN2Q8NDA2 5059 aa13.56□□□□□ -0.24
COL6A1-203ENST00000466285 CRIP1P50238 77 aa13.56□□□□□ -0.24
COL6A1-203ENST00000466285 ZFP69Q49AA0 526 aa13.56□□□□□ -0.24
COL6A1-203ENST00000466285 BAALCQ8WXS3 180 aa13.56□□□□□ -0.24
COL6A1-203ENST00000466285 CYTL1Q9NRR1 136 aa13.56□□□□□ -0.24
COL6A1-203ENST00000466285 CIDEAO60543 219 aa13.55□□□□□ -0.24
COL6A1-203ENST00000466285 UBE2G2P60604 165 aa13.55□□□□□ -0.24
COL6A1-203ENST00000466285 LGALSLQ3ZCW2 172 aaPredicted RBP13.55□□□□□ -0.24
COL6A1-203ENST00000466285 K7EQM0 130 aa13.54□□□□□ -0.24
COL6A1-203ENST00000466285 CXorf1O96002 111 aa13.54□□□□□ -0.24
COL6A1-203ENST00000466285 DMRTA1Q5VZB9 504 aa13.54□□□□□ -0.24
COL6A1-203ENST00000466285 RPL7L1Q6DKI1 246 aaKnown RBP13.54□□□□□ -0.24
COL6A1-203ENST00000466285 ZC2HC1AQ96GY0 325 aa13.54□□□□□ -0.24
COL6A1-203ENST00000466285 TMEM167BQ9NRX6 74 aa13.54□□□□□ -0.24
COL6A1-203ENST00000466285 M0R036 132 aa13.53□□□□□ -0.24
COL6A1-203ENST00000466285 ASIPP42127 132 aa13.53□□□□□ -0.24
COL6A1-203ENST00000466285 KRTAP10-4P60372 401 aaPredicted RBP13.53□□□□□ -0.24
COL6A1-203ENST00000466285 ZFP2Q6ZN57 461 aa13.53□□□□□ -0.24
COL6A1-203ENST00000466285 SCXQ7RTU7 201 aa13.53□□□□□ -0.24
COL6A1-203ENST00000466285 A0A0D9SG52 128 aa13.52□□□□□ -0.25
COL6A1-203ENST00000466285 GRIFINA4D1Z8 144 aa13.52□□□□□ -0.25
COL6A1-203ENST00000466285 A8MWV9 139 aa13.52□□□□□ -0.25
COL6A1-203ENST00000466285 FGF8P55075 233 aaPredicted RBP13.52□□□□□ -0.25
COL6A1-203ENST00000466285 TM2D2Q9BX73 214 aa13.52□□□□□ -0.25
COL6A1-203ENST00000466285 ACTR3CQ9C0K3 210 aaPredicted RBP13.52□□□□□ -0.25
COL6A1-203ENST00000466285 A0A087WWL8 130 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms