RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 FAM222AQ5U5X8 452 aa12.44□□□□□ -0.42
CPSF4-209ENST00000465132 Q6ZQT7 251 aa12.44□□□□□ -0.42
CPSF4-209ENST00000465132 SYT8Q8NBV8 401 aa12.44□□□□□ -0.42
CPSF4-209ENST00000465132 NUDT10Q8NFP7 164 aa12.44□□□□□ -0.42
CPSF4-209ENST00000465132 NUDT11Q96G61 164 aa12.44□□□□□ -0.42
CPSF4-209ENST00000465132 SEC11CQ9BY50 192 aa12.44□□□□□ -0.42
CPSF4-209ENST00000465132 RPP21Q9H633 154 aaKnown RBP12.44□□□□□ -0.42
CPSF4-209ENST00000465132 NOP10Q9NPE3 64 aaKnown RBP12.44□□□□□ -0.42
CPSF4-209ENST00000465132 OSTCQ9NRP0 149 aa12.44□□□□□ -0.42
CPSF4-209ENST00000465132 K7EN84 100 aa12.43□□□□□ -0.42
CPSF4-209ENST00000465132 M0R2P5 195 aa12.43□□□□□ -0.42
CPSF4-209ENST00000465132 PPP1R2P9O14990 202 aa12.43□□□□□ -0.42
CPSF4-209ENST00000465132 RPL23P62829 140 aaKnown RBP12.43□□□□□ -0.42
CPSF4-209ENST00000465132 PIK3CD-AS1Q5SR53 167 aa12.43□□□□□ -0.42
CPSF4-209ENST00000465132 PTH2Q96A98 100 aa12.43□□□□□ -0.42
CPSF4-209ENST00000465132 C11orf21Q9P2W6 132 aa12.43□□□□□ -0.42
CPSF4-209ENST00000465132 TMSB15BA0A087X1C1 80 aa12.42□□□□□ -0.42
CPSF4-209ENST00000465132 F2Z2F3 143 aa12.42□□□□□ -0.42
CPSF4-209ENST00000465132 ISOC2Q96AB3 205 aa12.42□□□□□ -0.42
CPSF4-209ENST00000465132 SFRP2Q96HF1 295 aa12.42□□□□□ -0.42
CPSF4-209ENST00000465132 MDFICQ9P1T7 246 aa12.42□□□□□ -0.42
CPSF4-209ENST00000465132 PHLDA3Q9Y5J5 127 aa12.42□□□□□ -0.42
CPSF4-209ENST00000465132 TRGV1A0A0A0MS02 117 aa12.41□□□□□ -0.42
CPSF4-209ENST00000465132 PLAC8L1A1L4L8 177 aa12.41□□□□□ -0.42
CPSF4-209ENST00000465132 CIDEAO60543 219 aa12.41□□□□□ -0.42
CPSF4-209ENST00000465132 SPINK4O60575 86 aa12.41□□□□□ -0.42
CPSF4-209ENST00000465132 MT-ND4LP03901 98 aa12.41□□□□□ -0.42
CPSF4-209ENST00000465132 PRM2P04554 102 aa12.41□□□□□ -0.42
CPSF4-209ENST00000465132 TCTAP57738 103 aa12.41□□□□□ -0.42
CPSF4-209ENST00000465132 OR10G8Q8NGN5 311 aa12.41□□□□□ -0.42
CPSF4-209ENST00000465132 RNASE7Q9H1E1 156 aaKnown RBP12.41□□□□□ -0.42
CPSF4-209ENST00000465132 TRGV2A0A075B6R0 118 aa12.4□□□□□ -0.42
CPSF4-209ENST00000465132 GRIFINA4D1Z8 144 aa12.4□□□□□ -0.42
CPSF4-209ENST00000465132 FAM231BA6NCW3 169 aa12.4□□□□□ -0.42
CPSF4-209ENST00000465132 OR5AL1P0C617 328 aa12.4□□□□□ -0.42
CPSF4-209ENST00000465132 ARMS2P0C7Q2 107 aa12.4□□□□□ -0.42
CPSF4-209ENST00000465132 ZFP82Q8N141 532 aa12.4□□□□□ -0.42
CPSF4-209ENST00000465132 RASL10AQ92737 203 aa12.4□□□□□ -0.42
CPSF4-209ENST00000465132 BORCS7Q96B45 105 aa12.4□□□□□ -0.42
CPSF4-209ENST00000465132 C9orf85Q96MD7 179 aa12.4□□□□□ -0.42
CPSF4-209ENST00000465132 HECTD4Q9Y4D8 3996 aa12.39□□□□□ -0.43
CPSF4-209ENST00000465132 DEFB130BP0DP73 79 aa12.39□□□□□ -0.43
CPSF4-209ENST00000465132 DEFB130AP0DP74 79 aa12.39□□□□□ -0.43
CPSF4-209ENST00000465132 CACNG7P62955 275 aa12.39□□□□□ -0.43
CPSF4-209ENST00000465132 ZNF876PQ49A33 203 aa12.39□□□□□ -0.43
CPSF4-209ENST00000465132 FER1L6-AS1Q8NA97 138 aa12.39□□□□□ -0.43
CPSF4-209ENST00000465132 ANAPC16Q96DE5 110 aa12.39□□□□□ -0.43
CPSF4-209ENST00000465132 C18orf15Q96N68 181 aa12.39□□□□□ -0.43
CPSF4-209ENST00000465132 GFRA4Q9GZZ7 299 aa12.39□□□□□ -0.43
CPSF4-209ENST00000465132 H3BVH4 76 aa12.38□□□□□ -0.43
CPSF4-209ENST00000465132 ATP5G1P05496 136 aa12.38□□□□□ -0.43
CPSF4-209ENST00000465132 APLNQ9ULZ1 77 aa12.38□□□□□ -0.43
CPSF4-209ENST00000465132 DNAH6Q9C0G6 4158 aa12.38□□□□□ -0.43
CPSF4-209ENST00000465132 VPS13DQ5THJ4 4388 aa12.38□□□□□ -0.43
CPSF4-209ENST00000465132 TRAV10A0A0B4J240 114 aa12.37□□□□□ -0.43
CPSF4-209ENST00000465132 GAGE12BA1L429 117 aa12.37□□□□□ -0.43
CPSF4-209ENST00000465132 IGLL5B9A064 214 aa12.37□□□□□ -0.43
CPSF4-209ENST00000465132 GAGE7O76087 117 aa12.37□□□□□ -0.43
CPSF4-209ENST00000465132 GAGE12FP0CL80 117 aa12.37□□□□□ -0.43
CPSF4-209ENST00000465132 GAGE12GP0CL81 117 aa12.37□□□□□ -0.43
CPSF4-209ENST00000465132 GAGE12IP0CL82 117 aa12.37□□□□□ -0.43
CPSF4-209ENST00000465132 RNASE3P12724 160 aaKnown RBP12.37□□□□□ -0.43
CPSF4-209ENST00000465132 RPL19P84098 196 aaKnown RBP12.37□□□□□ -0.43
CPSF4-209ENST00000465132 SPANXN1Q5VSR9 72 aa12.37□□□□□ -0.43
CPSF4-209ENST00000465132 WDR73Q6P4I2 378 aa12.37□□□□□ -0.43
CPSF4-209ENST00000465132 LINC00612Q8N6U2 182 aa12.37□□□□□ -0.43
CPSF4-209ENST00000465132 TSKUQ8WUA8 353 aa12.37□□□□□ -0.43
CPSF4-209ENST00000465132 SSBP4Q9BWG4 385 aaPredicted RBP12.37□□□□□ -0.43
CPSF4-209ENST00000465132 A8MWV9 139 aa12.36□□□□□ -0.43
CPSF4-209ENST00000465132 SNAI2O43623 268 aa12.36□□□□□ -0.43
CPSF4-209ENST00000465132 SLAQ13239 276 aa12.36□□□□□ -0.43
CPSF4-209ENST00000465132 C12orf74Q32Q52 190 aa12.36□□□□□ -0.43
CPSF4-209ENST00000465132 Q6ZTI0 123 aa12.36□□□□□ -0.43
CPSF4-209ENST00000465132 TPPP3Q9BW30 176 aa12.36□□□□□ -0.43
CPSF4-209ENST00000465132 SCRT2Q9NQ03 307 aa12.36□□□□□ -0.43
CPSF4-209ENST00000465132 CELA1Q9UNI1 258 aa12.36□□□□□ -0.43
CPSF4-209ENST00000465132 PCLOQ9Y6V0 5065 aa12.36□□□□□ -0.43
CPSF4-209ENST00000465132 C10orf91Q5T1B1 145 aa12.35□□□□□ -0.43
CPSF4-209ENST00000465132 MRPL16Q9NX20 251 aaKnown RBP12.35□□□□□ -0.43
CPSF4-209ENST00000465132 CARHSP1Q9Y2V2 147 aaKnown RBP12.35□□□□□ -0.43
CPSF4-209ENST00000465132 IGLC6P0CF74 106 aa12.34□□□□□ -0.43
CPSF4-209ENST00000465132 FOXA3P55318 350 aaPredicted RBP12.34□□□□□ -0.43
CPSF4-209ENST00000465132 OR4C5Q8NGB2 326 aa12.34□□□□□ -0.43
CPSF4-209ENST00000465132 FAM210BQ96KR6 192 aa12.34□□□□□ -0.43
CPSF4-209ENST00000465132 CTDSP1Q9GZU7 261 aa12.34□□□□□ -0.43
CPSF4-209ENST00000465132 NAT8BQ9UHF3 227 aa12.34□□□□□ -0.43
CPSF4-209ENST00000465132 TRAV4A0A0B4J268 109 aa12.33□□□□□ -0.44
CPSF4-209ENST00000465132 M0R381 172 aa12.33□□□□□ -0.44
CPSF4-209ENST00000465132 RHODO00212 210 aa12.33□□□□□ -0.44
CPSF4-209ENST00000465132 SMIM15Q7Z3B0 74 aa12.33□□□□□ -0.44
CPSF4-209ENST00000465132 SVBPQ8N300 66 aa12.33□□□□□ -0.44
CPSF4-209ENST00000465132 V9GYV3 84 aa12.33□□□□□ -0.44
CPSF4-209ENST00000465132 KIAA1109Q2LD37 5005 aa12.33□□□□□ -0.44
CPSF4-209ENST00000465132 DEFB131BA0A096LNP1 70 aa12.32□□□□□ -0.44
CPSF4-209ENST00000465132 TRGC1P0CF51 173 aa12.32□□□□□ -0.44
CPSF4-209ENST00000465132 SMIM17P0DL12 118 aa12.32□□□□□ -0.44
CPSF4-209ENST00000465132 ADCYAP1P18509 176 aa12.32□□□□□ -0.44
CPSF4-209ENST00000465132 CTRLP40313 264 aa12.32□□□□□ -0.44
CPSF4-209ENST00000465132 RHEBQ15382 184 aa12.32□□□□□ -0.44
CPSF4-209ENST00000465132 Q6ZTC4 211 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 414.5 ms