RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 M0R036 132 aa12.26□□□□□ -0.45
VPS52-214ENST00000463486 ZNF506Q5JVG8 444 aa12.26□□□□□ -0.45
VPS52-214ENST00000463486 SCRT2Q9NQ03 307 aa12.26□□□□□ -0.45
VPS52-214ENST00000463486 IL36BQ9NZH7 164 aa12.26□□□□□ -0.45
VPS52-214ENST00000463486 PRO0255Q9UI72 69 aa12.26□□□□□ -0.45
VPS52-214ENST00000463486 HHLA3Q9XRX5 114 aa12.26□□□□□ -0.45
VPS52-214ENST00000463486 LINC00588Q9Y4M8 146 aa12.26□□□□□ -0.45
VPS52-214ENST00000463486 GRIFINA4D1Z8 144 aa12.25□□□□□ -0.45
VPS52-214ENST00000463486 C9JCJ5 164 aa12.25□□□□□ -0.45
VPS52-214ENST00000463486 RS1O15537 224 aa12.25□□□□□ -0.45
VPS52-214ENST00000463486 TAGLN2P37802 199 aaKnown RBP12.25□□□□□ -0.45
VPS52-214ENST00000463486 ASIPP42127 132 aa12.25□□□□□ -0.45
VPS52-214ENST00000463486 CFAP126Q5VTH2 177 aa12.25□□□□□ -0.45
VPS52-214ENST00000463486 PAX4O43316 350 aa12.24□□□□□ -0.45
VPS52-214ENST00000463486 ARMS2P0C7Q2 107 aa12.24□□□□□ -0.45
VPS52-214ENST00000463486 SLAQ13239 276 aa12.24□□□□□ -0.45
VPS52-214ENST00000463486 ESRGQ1W209 222 aa12.24□□□□□ -0.45
VPS52-214ENST00000463486 CENPWQ5EE01 88 aa12.24□□□□□ -0.45
VPS52-214ENST00000463486 PIK3CD-AS1Q5SR53 167 aa12.24□□□□□ -0.45
VPS52-214ENST00000463486 OR4C5Q8NGB2 326 aa12.24□□□□□ -0.45
VPS52-214ENST00000463486 MED9Q9NWA0 146 aa12.24□□□□□ -0.45
VPS52-214ENST00000463486 TMSB15BA0A087X1C1 80 aa12.23□□□□□ -0.45
VPS52-214ENST00000463486 RBFOX3A6NFN3 312 aa12.23□□□□□ -0.45
VPS52-214ENST00000463486 RPL19P84098 196 aaKnown RBP12.23□□□□□ -0.45
VPS52-214ENST00000463486 ZNRF2Q8NHG8 242 aa12.23□□□□□ -0.45
VPS52-214ENST00000463486 HECTD4Q9Y4D8 3996 aa12.22□□□□□ -0.45
VPS52-214ENST00000463486 TRGV4A0A0C4DH28 118 aa12.22□□□□□ -0.45
VPS52-214ENST00000463486 H3BVH4 76 aa12.22□□□□□ -0.45
VPS52-214ENST00000463486 GATA1P15976 413 aaPredicted RBP12.22□□□□□ -0.45
VPS52-214ENST00000463486 S100A4P26447 101 aaKnown RBP12.22□□□□□ -0.45
VPS52-214ENST00000463486 FAM3BP58499 235 aaPredicted RBP12.22□□□□□ -0.45
VPS52-214ENST00000463486 DMRTA1Q5VZB9 504 aa12.22□□□□□ -0.45
VPS52-214ENST00000463486 UFSP1Q6NVU6 142 aa12.22□□□□□ -0.45
VPS52-214ENST00000463486 TEX261Q6UWH6 196 aa12.22□□□□□ -0.45
VPS52-214ENST00000463486 Q6ZR54 194 aa12.22□□□□□ -0.45
VPS52-214ENST00000463486 UBE2DNLQ8IWF7 75 aa12.22□□□□□ -0.45
VPS52-214ENST00000463486 C19orf71A6NCJ1 209 aa12.21□□□□□ -0.45
VPS52-214ENST00000463486 SMIM12Q96EX1 92 aa12.21□□□□□ -0.45
VPS52-214ENST00000463486 JPT2Q9H910 190 aa12.21□□□□□ -0.45
VPS52-214ENST00000463486 CXCL1P09341 107 aa12.2□□□□□ -0.46
VPS52-214ENST00000463486 GNG4P50150 75 aa12.2□□□□□ -0.46
VPS52-214ENST00000463486 CCL18P55774 89 aa12.2□□□□□ -0.46
VPS52-214ENST00000463486 PRR27Q6MZM9 219 aa12.2□□□□□ -0.46
VPS52-214ENST00000463486 SSBP4Q9BWG4 385 aaPredicted RBP12.2□□□□□ -0.46
VPS52-214ENST00000463486 PKD1P98161 4303 aa12.2□□□□□ -0.46
VPS52-214ENST00000463486 BIRC6Q9NR09 4857 aa12.19□□□□□ -0.46
VPS52-214ENST00000463486 TMEM250H0YL14 139 aa12.19□□□□□ -0.46
VPS52-214ENST00000463486 K7EQD1 137 aa12.19□□□□□ -0.46
VPS52-214ENST00000463486 CIDEAO60543 219 aa12.19□□□□□ -0.46
VPS52-214ENST00000463486 Q6ZSN1 163 aa12.19□□□□□ -0.46
VPS52-214ENST00000463486 FAM210AQ96ND0 272 aa12.19□□□□□ -0.46
VPS52-214ENST00000463486 SAMD10Q9BYL1 202 aa12.19□□□□□ -0.46
VPS52-214ENST00000463486 PARLQ9H300 379 aa12.19□□□□□ -0.46
VPS52-214ENST00000463486 ICOSQ9Y6W8 199 aa12.19□□□□□ -0.46
VPS52-214ENST00000463486 IGLV2-18A0A075B6J9 118 aa12.18□□□□□ -0.46
VPS52-214ENST00000463486 MED14OSP0DP75 135 aa12.18□□□□□ -0.46
VPS52-214ENST00000463486 SLC25A29Q8N8R3 303 aa12.18□□□□□ -0.46
VPS52-214ENST00000463486 PCNPQ8WW12 178 aaKnown RBP12.18□□□□□ -0.46
VPS52-214ENST00000463486 UPK3BQ9BT76 320 aa12.18□□□□□ -0.46
VPS52-214ENST00000463486 DNAH11Q96DT5 4516 aa12.18□□□□□ -0.46
VPS52-214ENST00000463486 IGHV3-73A0A0B4J1V6 119 aa12.17□□□□□ -0.46
VPS52-214ENST00000463486 LOC100131303A0A0U1RQF7 123 aa12.17□□□□□ -0.46
VPS52-214ENST00000463486 A8MWV9 139 aa12.17□□□□□ -0.46
VPS52-214ENST00000463486 SNAI2O43623 268 aa12.17□□□□□ -0.46
VPS52-214ENST00000463486 NDUFS6O75380 124 aaKnown RBP12.17□□□□□ -0.46
VPS52-214ENST00000463486 NXPH4O95158 308 aa12.17□□□□□ -0.46
VPS52-214ENST00000463486 MRPL23Q16540 153 aaKnown RBP12.17□□□□□ -0.46
VPS52-214ENST00000463486 TOR2AQ5JU69 321 aa12.17□□□□□ -0.46
VPS52-214ENST00000463486 ZFP2Q6ZN57 461 aa12.17□□□□□ -0.46
VPS52-214ENST00000463486 MRPS16Q9Y3D3 137 aaKnown RBP12.17□□□□□ -0.46
VPS52-214ENST00000463486 TRBV6-4A0A1B0GX49 114 aa12.16□□□□□ -0.46
VPS52-214ENST00000463486 K7EN84 100 aa12.16□□□□□ -0.46
VPS52-214ENST00000463486 M0R2N4 97 aa12.16□□□□□ -0.46
VPS52-214ENST00000463486 CRYGDP07320 174 aa12.16□□□□□ -0.46
VPS52-214ENST00000463486 MGST1P10620 155 aaKnown RBP12.16□□□□□ -0.46
VPS52-214ENST00000463486 GYPEP15421 78 aa12.16□□□□□ -0.46
VPS52-214ENST00000463486 LYPD5Q6UWN5 251 aa12.16□□□□□ -0.46
VPS52-214ENST00000463486 OCC1Q8TAD7 63 aa12.16□□□□□ -0.46
VPS52-214ENST00000463486 SFRP2Q96HF1 295 aa12.16□□□□□ -0.46
VPS52-214ENST00000463486 PHLDA3Q9Y5J5 127 aa12.16□□□□□ -0.46
VPS52-214ENST00000463486 OR5AL1P0C617 328 aa12.15□□□□□ -0.46
VPS52-214ENST00000463486 OR10AG1Q8NH19 301 aa12.15□□□□□ -0.46
VPS52-214ENST00000463486 Q9UF83 564 aa12.15□□□□□ -0.46
VPS52-214ENST00000463486 M0R381 172 aa12.14□□□□□ -0.47
VPS52-214ENST00000463486 SRP19P09132 144 aaKnown RBP12.14□□□□□ -0.47
VPS52-214ENST00000463486 IGLC6P0CF74 106 aa12.14□□□□□ -0.47
VPS52-214ENST00000463486 GZMBP10144 247 aa12.14□□□□□ -0.47
VPS52-214ENST00000463486 NEGR1Q7Z3B1 354 aa12.14□□□□□ -0.47
VPS52-214ENST00000463486 SYT8Q8NBV8 401 aa12.14□□□□□ -0.47
VPS52-214ENST00000463486 Q9H8V8 135 aa12.14□□□□□ -0.47
VPS52-214ENST00000463486 NBDYA0A0U1RRE5 68 aa12.13□□□□□ -0.47
VPS52-214ENST00000463486 RTL8CO15255 209 aa12.13□□□□□ -0.47
VPS52-214ENST00000463486 ZFP82Q8N141 532 aa12.13□□□□□ -0.47
VPS52-214ENST00000463486 NUDT10Q8NFP7 164 aa12.13□□□□□ -0.47
VPS52-214ENST00000463486 NUDT11Q96G61 164 aa12.13□□□□□ -0.47
VPS52-214ENST00000463486 KRTAP1-5Q9BYS1 174 aa12.13□□□□□ -0.47
VPS52-214ENST00000463486 EIF5A2Q9GZV4 153 aaKnown RBP12.13□□□□□ -0.47
VPS52-214ENST00000463486 C9JQL5 133 aa12.12□□□□□ -0.47
VPS52-214ENST00000463486 SRIP30626 198 aa12.12□□□□□ -0.47
VPS52-214ENST00000463486 OR2D3Q8NGH3 330 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms